XLOC_004115 (CT573222.1)



Basic Information


Item Value
gene id XLOC_004115
gene name CT573222.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 21752475 ~ 21752589 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007852
tgccacagccatatcaccctgcagcccaagactggtttcTCATTatagctaagcagggctgagcctggtcagtacctaggtgagaccacatgagaaaactaggttgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109288

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007852 True 115 rRNA 0.50 1 21752475 21752589

Neighbor


gene id symbol gene type direction distance location
XLOC_004114 BX537291.1 coding downstream 140165 21582560 ~ 21612310 (-)
XLOC_004113 srgap2 coding downstream 166318 21405697 ~ 21586157 (-)
XLOC_004112 ikbke coding downstream 348117 21364551 ~ 21404358 (-)
XLOC_004111 RASSF5 coding downstream 388641 21278687 ~ 21363834 (-)
XLOC_004110 dyrk3 coding downstream 484989 21259356 ~ 21267486 (-)
XLOC_004116 NA coding upstream 141013 21893602 ~ 21906060 (-)
XLOC_004117 NA coding upstream 336846 22089435 ~ 22094397 (-)
XLOC_004118 tfeb coding upstream 535365 22287954 ~ 22361306 (-)
XLOC_004119 tmem183a coding upstream 610983 22363572 ~ 22372072 (-)
XLOC_004120 myog coding upstream 840346 22592935 ~ 22605981 (-)
XLOC_004063 CR854846.1 misc downstream 5624797 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 9060784 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 9130708 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 9161179 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 9239213 12512966 ~ 12513262 (-)
XLOC_004108 NA non-coding downstream 632502 21117620 ~ 21119973 (-)
XLOC_004104 NA non-coding downstream 799226 20952056 ~ 20953249 (-)
XLOC_004096 BX511159.1 non-coding downstream 2336160 19416178 ~ 19416315 (-)
XLOC_004095 CT737428.1 non-coding downstream 2571920 19180452 ~ 19180555 (-)
XLOC_004093 NA non-coding downstream 2661374 19088414 ~ 19091101 (-)
XLOC_004123 CR555297.1 non-coding upstream 1406600 23159189 ~ 23159307 (-)
XLOC_004125 BX571675.2 non-coding upstream 1553166 23305755 ~ 23309318 (-)
XLOC_004130 LO016980.1 non-coding upstream 1902761 23655350 ~ 23655478 (-)

Expression



Co-expression Network