XLOC_004112 (ikbke)


Basic Information

Item Value
gene id XLOC_004112
gene name ikbke
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 21364551 ~ 21404358 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007845
GGGAAATGTGGGGTCTTTTCCAGTCCAGCCCTCGTTTTTGTTCTACAGAAATCCAGGAAGAACTGTACGTAAATACCTTCAATATGCAAATCCTGGTCAAACTTTCCATTCTAGATGTTTTTCACCAGAGGGcgatatacttttaaaaaaaaatctgtcatattTAATAATGTGCGCTAATGGTTTATAGTTTACCCTTAAAACTAAAGATATGACCTACAAAAAGAATATTTCTCCTTGCTATGTTTTCCTTGTTAACATTTTAAAGATTAAGTAATCTTGTGagagcaaaaacacacacagacgccCAACAAGGAAGTTCCTGACAGCAATGAAAGGAAAGTTGCTGCTGAGTTTCCGTCAAGCTGCTCTCTTTACTTCAGTCTGAGGACTGCAGGTGTAAAAAGTTTGTACAATAACTCAGTTTGGATTGAAGAGGAAAATGCGTCGCCATCAAACACACAAATGGTTAGTTGATTGTTTTTTGTAGTTTTCTGTTGTCGGTCAGTCAGAATAATgacgacgacgatgatgatgatgatgatggtgcgaAGGGGAAATTCTTAACGCTATTGTAAGTTGACACGTTTTCCCTAATAAGTACGTTAACATTACATTTaagaaacatgtttattttttacaaaatatgatTAATCTGCTTTTAGGTCATACAGGAAGGAAGTGGACTTTATTCGACTCTTCTGCTCTGACTGTTGTGTTTAAGAGAAGTGTTAAGTTCAGGAATAAAACGGTCCAATTTTGTCTACTTCTGTTAACAAAATGACAAGTACAGCAAACTACCTTTGGTCCCAGGAGGATATTCTTGGTCAGGGGGCGACAGCAAACGTCTATAAAGCACGAAACAAAAAAACTGGAGAACTGGTTGCTGTGAAGGTGTTCAACCTGGTGAGCTACAACAGGCCGTACGAAGTTCAGATGAGGGAGTTTGAGGTGCTGCAGCTGCTCAATCACGTCAATATTGTTAAACTCTTCGCTGTGGAGGAGATTATATCGAACCCAAAGCAGAAGATTCTTGTCATGGAGTATTGCTCAGGTGGAAGTTTACTGAACATGCTGGAGCAGCCTGAGCATGCGTTTGGACTTCCTGAGTCCGAGTTCCTCATTGTATTGCATTGTGTGGCTCATGGAATGAACCACCTCCGGGAAAATAGTGTGGTGCATAGGGACATCAAACCTGGGAATATCATGAGGCAAGTGGGTGAGGACGGGCGCTCCGTGTACAAGCTAGCAGACTTTGGTGCCGCTCGTGAGTTGGAAGATGATGAGAAGTTTGTGTCCATATATGGCACAGAGGAATATCTGCATCCGCACATGTACGAGCGAGCTGTGCTGCGTAGTCCCCAGCAGAAAGCATATGGCGTGTCTGTGGATCTGTGGAGCATTGGTGTCACCATTTACCACATGGCTACTGGTAGTCTTCCATTTAGACCATTTGGAGGACCGCGCAAAAACAAGCAGATGATGCACAAGATCACTACAGAAAAACCAGCAGGAACAATAGCTGGTGTACAGAAGGAGGAAGACGGACCCATTGAATGGAGAGACAAACTGCCACTCTCCTGCCAACTATCAGAAGGTTTGAAGACCCAGTTGGTCCCGGTGTTGGCCAACATACTGCTGGCTGACGATGAGAAGTGTTGGAAATTTCCCCAGTTCTTTAGTGCCACTAATGACATCCTGAATCGCATCACCATCTACATCTTCTCTCTTCAGCAGGCCACAACATACAGCATCTACATACAATTCCACAACacGGTCTCAATCTTTTTTGAGGATGTTCAGGCCCAAACTGGAATTGAACCTGCGGCTCAACAGTATTTATTTCAAGGCCATCCTCTCATATTAGATCCAAGCATGAAAGTAGTGAACATTCCCCATACCAGCTCAGATAAGCCCATGATTCTGATCAGCCGGCGACTGGAAAGGATAATTGGATATCCCTTCGAAGAACCTGAATCCCCTCCAATGCCTGGAAAGTTTGACGTcgttgcagattttgttttcacCAAGACCATTGTCAAGGTCATTCATCAGTACCTGCGGATTGCTTATTCGCTGCAGGAATACAGGCAATTTATTCTGCAGGGCTTCAATAGCTACATTGAACAAACAAGCTCTGAAGTCATTGATGTGACGCACAGGATTTCTAAAGTGAAAATGAAGCTGCATTCTTCTATCAGCACAGAGAAAACTCTCCACGTCTTCACTCAGACTTTTGCACATGAGTTTCCAGACTTTATAGACAGTAAGAAGAAATTCCCACTGATTGAAGCGGAATTGCAGCAGATGTGCGGCAGGGGAATCAGAGAATTTCAGAATATACTGCAGTATCTGCGTGTGACACTGTCTAAACACTCAGAGACACTGGCCAATGATAAGAGCATTCAGAAGATGGAGGTTTTGTTGTCGCAGATTGTTGATGTACATTTCCAGTACTTCAGGGACAGACAGACAAGAAAGCTCGGCTATAATGACGAACAGATTCACAAGTTTGAGAAGTTGAATCTGTCTTCATACTTAAAGAAGTTCAAGAGTTTATTCAAGGATGACTGTTTTCAGAAGTACCTGGATGTTCTGAATACCACAGACACGTGTAGCAGGGCTCTGTATGACATGCAGACACATCTAGACAAATTCAGAGATACTTTGCTGCAGAGAATTCAGGATTTGAAGGCACATGAGATCCTGCAGAACAAGGTTCTGGAAAGAGTTGTGCATCGAGCTGTCCAGCAGCCAGTTAAAGCCGAGGTGGTGGatggaaagaaaaaagaagagcACATGATTCTCAAAATGACCAGATTAAAGAGTGAGATGGAGGCTGTGGCATGGGAActacagaaaaacaacaatatGATAGAAAGCCTTTCAGTTGTCACCCCTACCATGCCAgtggagaaaaaaaaccctcaaaccAACAGACCGTGAAGACCTCAAAAGAATACAGACTGCaccaaaatatttatattcacaaagcCCAGATCTCTGAGCTAAAAGAAAacagaaagcaaaacaaaacgCATCTCAAAACTGTTCTTAGTTGTCACTCTACAACTGTAAAGGAACAAATTTCTCACTTTAATGACTGTTTCCAGGAAAAGCAGCTGAAACTTCATGATGTGTACAAGTGTGCAAAGCTGAAAGTACACATTTTGTCTGAACTGACTTACCTGTATGACTGGAGTCTGGTCCCTTTCTGTGACCTGTAGATTGTTTACTTCTTTCTTAATCTGTTACAGTGTTCTTTTCTTGTTTCACTATTGAGCATTTTAAAGTACACCAAAATGTGTTTATGAATATCATGTGGGGGCACAACTGTCCTctcattggtcagaattcatcTGTTTGGGTCCCTACGCTTTATCCAGCACAACGTATTGACTAGTGTGCTCTGCAGGCTTAATATGACCAAACACTATAAATATGCAAAGACACTTCACTCGCTTTACTATGAATGGGACAAGTGTAATGCTTAGGATGACCACCACAGCAAAGGAAGTCCTGCCTTCTGGTTGAAACAGCCAATTGTCAATCCTTTTAGCCATGTGGTTTTTTGGGGGAATAAGGCAAGCCATGTTTTTTGCCGACTACTATGTGCTTGCATTGATTTGGACAGGAGAAATGACATCACAAAGTGTAGCATTGTTGTCCTGAGATCTTTACTTTGGGTCTTGTctcaatttttatattatttactgtgtCAGTTGAAACAGCCATACAGGACATTGGTGTCATGCCAATCTTTGCAAAGACACAGATGCTGGAACAAACTGCAAAtaacatgttttaaatgtaattagtAGGAACAACAATACTTGGACAGGTCACTTTTTTCACATGTGGTTGCTGGTTTGACGTGTGTTATTAAATAGCAGGTTCAGCAAGTGTTTTTTGATATTTCAGGATTTCCCCATTCATTTAGAAAATGGCTGTTGAGTGAACAGACTTTCCTTGAAAGGGATTTTGATATGACTCTATCTAATCTGTAGTAGGGATGTCCAGATATGGAAGTTTGGGCAGATactgataaccgataactctgTATTAACTGGTCAACACAACCAAACAGCCTCACGCTTTGTTTTTGTTCACGCTGGGACACCTTGTTTAGGCGAGTGATTGTTTTGTTGTGGACTCAAGTGTGATTGCAGTGTTCACATACAGTACTGAATGTCTAAACTAACTCAACTAAGAAAGAAAACCTGCCTAATTCTCAAACCAACACTTCAGAAAAGACTGATTTAAAATTGAGCTTGAGTTGATTTTTATATCAGTTATATCTTTTTAgattaaatgttaatgtaattgctgcattttatctttatacAATCTACTAGTATTGATTTCATCAGCCAAGATGAAAGAAATACAGATCTGCAACTAGTCTTCTCGAGTAATCTTAAGACCTAAATATATTGATGACACTGTGCATTCAGTTGGTATTATTGGCATTATTATTGCACAGGCATGGAATAAAGACAGGGGTGTTCAATCTGCCCCATGCTATTGATTTTGTTTCAGAGAGATACAGTAACAGCAATAATGCAGGTTGTGTGTTTTGATCACACAACGTATGGTCCtaaaggaagttttttttttcaacagtgcTCAGCTGGGATCCAAAAAAATGTGAACAGTAAAAGACTTCATGAGGGATCACCGTATTACAAGTACTGACAGGTATAAACAGACTCACTACCATGATGTGGAAAGTGAAAGATGTATGCGGTGGGTTCTGATGTCACATCACAGGGTTTGAGTTTTGGGGAATCCCTCACACTATGGGGAACTGTAATGACCTTAAAGAGACCACGCTGTGGTTCACTGTCAAATTTTATGTATATTTGACTTGACGTGGAAATTTTATTGACTTTCCTTTTTAGCAGTTTGTAAACTTGTATCttagattttattttgtgtatgtgtgtgtgtgtgtgtatttgagatttttgaattaaaaaatactaataaactgtgtgtgtgtgtgtgagagagatgttTAGtcattgtatttatgtatatgtgtgtatgaagacagacagatagat
>TCONS_00007846
GGAAGTTCCTGACAGCAATGAAAGGAAAGTTGCTGCTGAGTTTCCGTCAAGCTGCTCTCTTTACTTCAGTCTGAGGACTGCAGGTGTAAAAAGTTTGTACAATAACTCAGTTTGGATTGAAGAGGAAAATGCGTCGCCATCAAACACACAAATGGTCATACAGGAAGGAAGTGGACTTTATTCGACTCTTCTGCTCTGACTGTTGTGTTTAAGAGAAGTGTTAAGTTCAGGAATAAAACGGTCCAATTTTGTCTACTTCTGTTAACAAAATGACAAGTACAGCAAACTACCTTTGGTCCCAGGAGGATATTCTTGGTCAGGGGGCGACAGCAAACGTCTATAAAGCACGAAACAAAAAAACTGGAGAACTGGTTGCTGTGAAGGTGTTCAACCTGGTGAGCTACAACAGGCCGTACGAAGTTCAGATGAGGGAGTTTGAGGTGCTGCAGCTGCTCAATCACGTCAATATTGTTAAACTCTTCGCTGTGGAGGAGATTATATCGAACCCAAAGCAGAAGATTCTTGTCATGGAGTATTGCTCAGGTGGAAGTTTACTGAACATGCTGGAGCAGCCTGAGCATGCGTTTGGACTTCCTGAGTCCGAGTTCCTCATTGTATTGCATTGTGTGGCTCATGGAATGAACCACCTCCGGGAAAATAGTGTGGTGCATAGGGACATCAAACCTGGGAATATCATGAGGCAAGTGGGTGAGGACGGGCGCTCCGTGTACAAGCTAGCAGACTTTGGTGCCGCTCGTGAGTTGGAAGATGATGAGAAGTTTGTGTCCATATATGGCACAGAGGAATATCTGCATCCGCACATGTACGAGCGAGCTGTGCTGCGTAGTCCCCAGCAGAAAGCATATGGCGTGTCTGTGGATCTGTGGAGCATTGGTGTCACCATTTACCACATGGCTACTGGTAGTCTTCCATTTAGACCATTTGGAGGACCGCGCAAAAACAAGCAGATGATGCACAAGATCACTACAGAAAAACCAGCAGGAACAATAGCTGGTGTACAGAAGGAGGAAGACGGACCCATTGAATGGAGAGACAAACTGCCACTCTCCTGCCAACTATCAGAAGGTTTGAAGACCCAGTTGGTCCCGGTGTTGGCCAACATACTGCTGGCTGACGATGAGAAGTGTTGGAAATTTCCCCAGTTCTTTAGTGCCACTAATGACATCCTGAATCGCATCACCATCTACATCTTCTCTCTTCAGCAGGCCACAACATACAGCATCTACATACAATTCCACAACacGGTCTCAATCTTTTTTGAGGATGTTCAGGCCCAAACTGGAATTGAACCTGCGGCTCAACAGTATTTATTTCAAGGCCATCCTCTCATATTAGATCCAAGCATGAAAGTAGTGAACATTCCCCATACCAGCTCAGATAAGCCCATGATTCTGATCAGCCGGCGACTGGAAAGGATAATTGGATATCCCTTCGAAGAACCTGAATCCCCTCCAATGCCTGGAAAGTTTGACGTcgttgcagattttgttttcacCAAGACCATTGTCAAGGTCATTCATCAGTACCTGCGGATTGCTTATTCGCTGCAGGAATACAGGCAATTTATTCTGCAGGGCTTCAATAGCTACATTGAACAAACAAGCTCTGAAGTCATTGATGTGACGCACAGGATTTCTAAAGTGAAAATGAAGCTGCATTCTTCTATCAGCACAGAGAAAACTCTCCACGTCTTCACTCAGACTTTTGCACATGAGTTTCCAGACTTTATAGACAGTAAGAAGAAATTCCCACTGATTGAAGCGGAATTGCAGCAGATGTGCGGCAGGGGAATCAGAGAATTTCAGAATATACTGCAGTATCTGCGTGTGACACTGTCTAAACACTCAGAGACACTGGCCAATGATAAGAGCATTCAGAAGATGGAGGTTTTGTTGTCGCAGATTGTTGATGTACATTTCCAGTACTTCAGGGACAGACAGACAAGAAAGCTCGGCTATAATGACGAACAGATTCACAAGTTTGAGAAGTTGAATCTGTCTTCATACTTAAAGAAGTTCAAGAGTTTATTCAAGGATGACTGTTTTCAGAAGTACCTGGATGTTCTGAATACCACAGACACGTGTAGCAGGGCTCTGTATGACATGCAGACACATCTAGACAAATTCAGAGATACTTTGCTGCAGAGAATTCAGGATTTGAAGGCACATGAGATCCTGCAGAACAAGGTTCTGGAAAGAGTTGTGCATCGAGCTGTCCAGCAGCCAGTTAAAGCCGAGGTGGTGGatggaaagaaaaaagaagagcACATGATTCTCAAAATGACCAGATTAAAGAGTGAGATGGAGGCTGTGGCATGGGAActacagaaaaacaacaatatGATAGAAAGCCTTTCAGTTGTCACCCCTACCATGCCAgtggagaaaaaaaaccctcaaaccAACAGACCGTGAAGACCTCAAAAGAATACAGACTGCaccaaaatatttatattcacaaagcCCAGATCTCTGAGCTAAAAGAAAa

Function

symbol description
ikbke Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human IKBKE (inhibitor of nuclear factor kappa B kinase subunit epsilon).

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
ko04620 Toll-like receptor signaling pathway
ko04621 NOD-like receptor signaling pathway
ko04622 RIG-I-like receptor signaling pathway
ko04623 Cytosolic DNA-sensing pathway
ko04625 C-type lectin receptor signaling pathway
ko04657 IL-17 signaling pathway
ko05207 Chemical carcinogenesis - receptor activation
ko05161 Hepatitis B
ko05160 Hepatitis C
ko05171 Coronavirus disease - COVID-19
ko05164 Influenza A
ko05162 Measles
ko05168 Herpes simplex virus 1 infection
ko05167 Kaposi sarcoma-associated herpesvirus infection
ko05169 Epstein-Barr virus infection
ko05165 Human papillomavirus infection
ko05417 Lipid and atherosclerosis
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-040718-251 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human IKBKE (inhibitor of nuclear factor kappa B kinase subunit epsilon).

Ensembl:

ensembl_id ENSDARG00000070606

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007845 False 5066 mRNA 0.40 21 21364551 21404358
TCONS_00007846 True 2508 mRNA 0.44 22 21366598 21404044

Neighbor

gene id symbol gene type direction distance location
XLOC_004111 RASSF5 coding downstream 717 21278687 ~ 21363834 (-)
XLOC_004110 dyrk3 coding downstream 97065 21259356 ~ 21267486 (-)
XLOC_004109 mapkapk2a coding downstream 146379 21154678 ~ 21218172 (-)
XLOC_004108 NA coding downstream 244578 21117620 ~ 21119973 (-)
XLOC_004107 fmoda coding downstream 332778 21025895 ~ 21031773 (-)
XLOC_004113 srgap2 coding upstream 1339 21405697 ~ 21586157 (-)
XLOC_004114 BX537291.1 coding upstream 178202 21582560 ~ 21612310 (-)
XLOC_004115 CT573222.1 coding upstream 348117 21752475 ~ 21752589 (-)
XLOC_004116 NA coding upstream 489244 21893602 ~ 21906060 (-)
XLOC_004117 NA coding upstream 685077 22089435 ~ 22094397 (-)
XLOC_004063 CR854846.1 misc downstream 5236873 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 8672860 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 8742784 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 8773255 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 8851289 12512966 ~ 12513262 (-)
XLOC_004104 NA non-coding downstream 411302 20952056 ~ 20953249 (-)
XLOC_004096 BX511159.1 non-coding downstream 1948236 19416178 ~ 19416315 (-)
XLOC_004095 CT737428.1 non-coding downstream 2183996 19180452 ~ 19180555 (-)
XLOC_004093 NA non-coding downstream 2273450 19088414 ~ 19091101 (-)
XLOC_004123 CR555297.1 non-coding upstream 1754831 23159189 ~ 23159307 (-)
XLOC_004125 BX571675.2 non-coding upstream 1901397 23305755 ~ 23309318 (-)

Expression


Co-expression Network