XLOC_004157 (kaznb)


Basic Information

Item Value
gene id XLOC_004157
gene name kaznb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25857941 ~ 26180714 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007940
agtgtttgtgtgtgtgtgtgtgtattttgaaaatgtaaaaatccaGTATGTTCCCTGTGTCTGTTGATTTTAGTGAATAGTATATATAGTTTGCTTAGTATTGAAATCATGATATCTAAGAGAAGTCCCCAAAAGGATAGTAAACCAaacatgtgtgtgagtgtgtagcgGAGAGCGAGAACAGGTAGAAGAGGTGTAGAGGGGGTGGGGAAGATCAGAAAACGCCCAAGAGAATCTCCCAGAACAGGCTCAGAGAGAGGACGGCAGCTCAAACTTGTTTATACTCCCTCGCCAGCTCCGCCCTAGTAACCTGTCAGGGAGGAGTGAACGTAGAGGTGTGTGTGAGGCAAGTTTATTTGAGTATTCCTGCTATGAGAAAAGGACAGTGAAGTCAGCCGGAGCCGGCGCTGTTAAGAGCATGAGATCTGAAAGGGAAGAGGGCAGACCAGtgtTGCTGAGGGAGGAGGTGGCGCAGTTACAGGAGGAGGTGCATCTCCTGCGGCAGATGAAGGACATGTTGAGTAAAGATCTGGAGGATTCTCACGGCGGCTGTTCGGCCGATACGCTCTCCGCCGCTGAGCTCAAGGTGCAGCTGGGGGAGAAGGAGCAGGAGCTGGAACGTGCCAAGGAGGCCTTACAAGctaTGAAGGGTGACCGGAAGCGGTTGAAGGCAGAGAAAGCAGACCTGGTAAACCAGATGCAGCAGCTTTATACCACACTGGAAAGCAGAGAAGAGCAGCTCAGAGACTTTATCAGAAACTATGACCAGCACAGAAAGGAGAGCGAGGACGCGGTGAAGGCTCTGGCTAAAGAGAAGGACATGCTGGAGCGAGAAAAATGGGACCTGCGCCGGCAGACCAAAGAGGCCACAGAACAGGCCACTGTCCTGCGCTCACAGATCGACATGAAGGAGAACAGAGTCAAAGAGCTGGAGGCCGAGCTCACTATGGCGAAGCAGTCTCTGGCCACCCTCACTAAAGACGTGCCAAAGCGTCACTCTCTGGCAATGCCATCAGAGCCAGTGGTCAACGGCAGTCAGGAGTGGGTGATGCAGGCAGACCTTCCTCTCACTGCAGCCATCAGACAGAGCCAACAGACCCTGTACCACTCGCATCCCGCAGACAGGCAAGCTGCTTTGAGGATCAGCCCCTGTCACTCGCGTCAGCCCTCCATCATCTCGGACGCTTCGGCTGCTGACGGCGACCGCTCGTCCACCCCGAGCGACATCAACTCGCCCCGCCACAGGACTCACTCTCTCTGCAATTCCATGGAGGACCTCGAGGACCAGAAGCGtaagaagaagaaggagaagaTGAGTCTCGGCTCACTTTCTCGAGTGTTTGCCCGGGGAAAATCTCAGCGCAAGTCCTTGGATCCGGGCCTGTTTGATGACTCAGACAGCGTCTCCAGTCAGACACAGCCCAGCCTATCGGACGGCGAGGATCAGCTGGAGCGACTGCAGCAGGCAGAGCTGACGCGCAGCAGGCCCATGTCTCTGTGGAGAGCCGGCACTGTGCAGGCCTGGCTGGAGGTGGTCATGGCCATGCCAATGTACATGCGCGCCTGCTCTGACAATGTTAAGAGCGGAAAGGTGCTGCTGGGATTGAGCGATGAGGATCTGGAGCTGGGTTTGGGCATTAACAGTCCTATGCACCGCAGGAAGCTCAGACTCGCCATTGAGGACTACAGAGAAGCAGAGAATGGACGAGGCCTGTCTAAAGCTGCAGATATGGACCATCACTGGGTGTCTAAGAGCTGGCTGAGTGACGTCGGGCTGCCGCAGTATTCACAGGTCTTTCACAACCAGCTGGTGGATGGCAGAGTTTTGAACTCCATCACACGCAGAGACCTGGAGACCGTCTTCAACATCACCAACAAGTTCCATGTCACCAGCATCCTGTCAGCCATCCAGCTTCTGCAAATGCTCAATTTCGACAAAGAGTCTATACAGGCACGTCGCACTCAATGCGAGAATCGAGATCTGGATCCGGTGGTCTGGACCAGCCATCGCGTCATTAAATGGATCAGGGATATTGATCTTAAGGAGTATGCTGATAACCTTCAGAACAGTGGCATCCATGGTGCTGTGATGGTTCTGGATCCCACCTTCAGTGCAGACAGCATGGCTAAAGCTCTCGACATCCCCAACAACAAACACATGATCCACCGTCATCTGTACGAGGAAATGAAAGTGCTTCTCAATCCAGCAAGGTCTAACTAATCAGGCTCAGGATTACAGAAAAGAGGGCACTCCAACACATTCTCCTTCGTCAAACTGCCGTAAAACCGAGGAGGGATTTTCTCCCAGGAAAAATGTTGGCAAGAGCCCTTTGAGATTCAATCCTCTGGTGGCTGTTAGCAGAGAGTTGTCGTTTCAGGGCGGTTGTGGATCTCCACCCAGAGAAGAGCGCATCAAGATCCTGCAAAGGACCAAGGGCAGCCCCATGCATGGCTACTCCAGCATAGAGATCACTAATGTCTGAGTAATCAGCCTCTAAACGGACCAAATGAGCTCAATTATTTGTAAAAGAGATTTAAAAATTGACCGTTTGCACTTTAGTGAATTTTATATTGGCAACCAACCATAATTAAGCACTTAATAAAAAATTTTGTAGACATGCTGCGTTAAAAAAGCTAATATTTTGTTACTAATATAATACTTAGATAACCTTATTCCTGTAAATTCCAGTCAGAACTGTAGGTATGCAGCTGAAATCAGTACCACATGTTCAGACGTTCATTCCCTCCATTAAGGCCATCACAAACACTGTGCTTGTGTAAC
>TCONS_00007941
GGAAGTCTGACTTGGGATTTTTTTTGTTCCTCTTCTCCGGcgtgtgttgtgtatgtgtggTCTAAACTGTGGCAGGCGAGGAGGGATAAAGGGGGACCCGTGGCTTGTTCTACCCCCTGACAGAGCCCTTGACACCATGCCCCTCTGTGTGGATTTGCTTCTCAGGGCAAAATCCTGAAAATGATGGAGGACAACAAGCAGCTGGCTCAGCGGATCGATGGGGCCATCCAGTCGGCCAGTCAGGAGGTGACCAACCTGCGCTCCGAGCTGTCCGCCACCAGCCGCAGATTGGCCGAGTTGGGGGCGTGCAACCCCATCGGCCTGGAGAACAACCAGCAAaaccaccatcaccaccaccatcaccaccacctCCACGATCCGTCAGTCCACCACCGGCAGAAGACAGTGGTTTCTGATCTCACTTTCCAAACAGGCATGTCCAGCTTGATGGACTTCGGGACTCCAGATTCTACACTCGACAAAGtgtTGCTGAGGGAGGAGGTGGCGCAGTTACAGGAGGAGGTGCATCTCCTGCGGCAGATGAAGGACATGTTGAGTAAAGATCTGGAGGATTCTCACGGCGGCTGTTCGGCCGATACGCTCTCCGCCGCTGAGCTCAAGGTGCAGCTGGGGGAGAAGGAGCAGGAGCTGGAACGTGCCAAGGAGGCCTTACAAGctaTGAAGGGTGACCGGAAGCGGTTGAAGGCAGAGAAAGCAGACCTGGTAAACCAGATGCAGCAGCTTTATACCACACTGGAAAGCAGAGAAGAGCAGCTCAGAGACTTTATCAGAAACTATGACCAGCACAGAAAGGAGAGCGAGGACGCGGTGAAGGCTCTGGCTAAAGAGAAGGACATGCTGGAGCGAGAAAAATGGGACCTGCGCCGGCAGACCAAAGAGGCCACAGAACAGGCCACTGTCCTGCGCTCACAGATCGACATGAAGGAGAACAGAGTCAAAGAGCTGGAGGCCGAGCTCACTATGGCGAAGCAGTCTCTGGCCACCCTCACTAAAGACGTGCCAAAGCGTCACTCTCTGGCAATGCCATCAGAGCCAGTGGTCAACGGCAGTCAGGAGTGGGTGATGCAGGCAGACCTTCCTCTCACTGCAGCCATCAGACAGAGCCAACAGACCCTGTACCACTCGCATCCCGCAGACAGGCAAGCTGCTTTGAGGATCAGCCCCTGTCACTCGCGTCAGCCCTCCATCATCTCGGACGCTTCGGCTGCTGACGGCGACCGCTCGTCCACCCCGAGCGACATCAACTCGCCCCGCCACAGGACTCACTCTCTCTGCAATTCCATGGAGGACCTCGAGGACCAGAAGCGtaagaagaagaaggagaagaTGAGTCTCGGCTCACTTTCTCGAGTGTTTGCCCGGGGAAAATCTCAGCGCAAGTCCTTGGATCCGGGCCTGTTTGATGGTACTTCCACCCCTGATTACTATATAGAGGAGGATGCTGACTGGTGATAATGCTATGGTGTGAGCGTttagctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtggacGTATGCCTGAAAATGTATGAGTtaaagtgtgtgagtgtgcacaAGCGTTTGTGTGTGCCTTCAAATGTAATCCCAGTGAAAATACAGGAAAGAGGAAGAACTGCTGCCTCCTTGAAATGTACATAACGACACTTAAAAGAAACATCtatgtaaatgaaatatatatttatatatgtatgcatatgtacatatgtttacattcatataaatatatacatgggATCATTTGCGTGTGAATATGTTTATGCTGTTATAATAATGCTTTATTTGTGGTAATATATGTCTCTTTTTTTATAAACTGGAAACTTGAA
>TCONS_00007942
aaaaaaaaaatctgctccctGCAGCAGCGCTTCAACTCGACGATCGGTTTCATaagaagcgagagagagagagagagcaagcatTGAAAGGGAGGGGTAAAGCCGAGGCAGAGGGAGGAGAGAAGAGGGCACACGCACAACAAACGCCAGTCCAACCCTGAGCCCGCGGGAATCCAGCGCTTCTCCCTCCGTCAGCAGGACAGCAGAAAACCTGTCTCAGTCTGGAGAAACCTGCCAACCTCAACACATGATCACAGAGCAGCGGCAGAAGGCAAGACATCATTGCTCTGATTCTCTCTCAGTCATtctccttacacacacacacacacgcacacacacacacgcactctcaTTATCTTACATGAAGCTATTTCTCTCCGTCCTGAGCTCAAACCTCTGTGCTATTCTTACACAGCTGCAACGTTGCTCCAGCTGCTGCTTTCCCAAAAAGACGAACCGCTGCTCTTCTGCGTGGCATTTAGAGACTGACCTGGGACATCCCCCAAACCATGGAGGACACTCTCACCTGCACCCCTACCACCTTTTCCCAAGTCTTCGGCCGCCAAGGACAGTTGATGCAAGCTACTGTGCAATCTCTGAACAGCCTGAACGACCAAATCGCACACTTCATGGTGAACAGACCCAACGCTATGAGTCATGAAGAGGACACCTTTCTGCCCACCGAGAGGGACACTTTGAACCAATCCATGGCTCTAATGAGACACCTGCTCATGGATGCACAGGGCAAAATCCTGAAAATGATGGAGGACAACAAGCAGCTGGCTCAGCGGATCGATGGGGCCATCCAGTCGGCCAGTCAGGAGGTGACCAACCTGCGCTCCGAGCTGTCCGCCACCAGCCGCAGATTGGCCGAGTTGGGGGCGTGCAACCCCATCGGCCTGGAGAACAACCAGCAAaaccaccatcaccaccaccatcaccaccacctCCACGATCCGTCAGTCCACCACCGGCAGAAGACAGTGGTTTCTGATCTCACTTTCCAAACAGGCATGTCCAGCTTGATGGACTTCGGGACTCCAGATTCTACACTCGACAAAGtgtTGCTGAGGGAGGAGGTGGCGCAGTTACAGGAGGAGGTGCATCTCCTGCGGCAGATGAAGGACATGTTGAGTAAAGATCTGGAGGATTCTCACGGCGGCTGTTCGGCCGATACGCTCTCCGCCGCTGAGCTCAAGGTGCAGCTGGGGGAGAAGGAGCAGGAGCTGGAACGTGCCAAGGAGGCCTTACAAGctaTGAAGGGTGACCGGAAGCGGTTGAAGGCAGAGAAAGCAGACCTGGTAAACCAGATGCAGCAGCTTTATACCACACTGGAAAGCAGAGAAGAGCAGCTCAGAGACTTTATCAGAAACTATGACCAGCACAGAAAGGAGAGCGAGGACGCGGTGAAGGCTCTGGCTAAAGAGAAGGACATGCTGGAGCGAGAAAAATGGGACCTGCGCCGGCAGACCAAAGAGGCCACAGAACAGGCCACTGTCCTGCGCTCACAGATCGACATGAAGGAGAACAGAGTCAAAGAGCTGGAGGCCGAGCTCACTATGGCGAAGCAGTCTCTGGCCACCCTCACTAAAGACGTGCCAAAGCGTCACTCTCTGGCAATGCCATCAGAGCCAGTGGTCAACGGCAGTCAGGAGTGGGTGATGCAGGCAGACCTTCCTCTCACTGCAGCCATCAGACAGAGCCAACAGACCCTGTACCACTCGCATCCCGCAGACAGGCAAGCTGCTTTGAGGATCAGCCCCTGTCACTCGCGTCAGCCCTCCATCATCTCGGACGCTTCGGCTGCTGACGGCGACCGCTCGTCCACCCCGAGCGACATCAACTCGCCCCGCCACAGGACTCACTCTCTCTGCAATTCCATGGAGGACCTCGAGGACCAGAAGCGtaagaagaagaaggagaagaTGAGTCTCGGCTCACTTTCTCGAGTGTTTGCCCGGGGAAAATCTCAGCGCAAGTCCTTGGATCCGGGCCTGTTTGATGGTACTTCCACCCCTGATTACTATATAGAGGAGGATGCTGACTGGTGATAATGCTATGGTGTGAGCGTttagctatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtggacGTATGCCTGAAAATGTATGAGTtaaagtgtgtgagtgtgcacaAGCGTTTGTGTGTGCCTTCAAATGTAATCCCAGTGAAAATACAGGAAAGAGGAAGAACTGCTGCCTCCTTGAAATGTACATAACGACACTTAAAAGAAACATCtatgtaaatgaaatatatatttatatatgtatgcatatgtacatatgtttacattcatataaatatatacatgggATCATTTGCGTGTGAATATGTTTATGCTGTTATAATAATGCTTTATTTGTGGTAATATATGTCTCTTTTTTTATAAACTGGAAACTTGAA
>TCONS_00007943
aaaaaaaaaatctgctccctGCAGCAGCGCTTCAACTCGACGATCGGTTTCATaagaagcgagagagagagagagagcaagcatTGAAAGGGAGGGGTAAAGCCGAGGCAGAGGGAGGAGAGAAGAGGGCACACGCACAACAAACGCCAGTCCAACCCTGAGCCCGCGGGAATCCAGCGCTTCTCCCTCCGTCAGCAGGACAGCAGAAAACCTGTCTCAGTCTGGAGAAACCTGCCAACCTCAACACATGATCACAGAGCAGCGGCAGAAGGCAAGACATCATTGCTCTGATTCTCTCTCAGTCATtctccttacacacacacacacacgcacacacacacacgcactctcaTTATCTTACATGAAGCTATTTCTCTCCGTCCTGAGCTCAAACCTCTGTGCTATTCTTACACAGCTGCAACGTTGCTCCAGCTGCTGCTTTCCCAAAAAGACGAACCGCTGCTCTTCTGCGTGGCATTTAGAGACTGACCTGGGACATCCCCCAAACCATGGAGGACACTCTCACCTGCACCCCTACCACCTTTTCCCAAGTCTTCGGCCGCCAAGGACAGTTGATGCAAGCTACTGTGCAATCTCTGAACAGCCTGAACGACCAAATCGCACACTTCATGGTGAACAGACCCAACGCTATGAGTCATGAAGAGGACACCTTTCTGCCCACCGAGAGGGACACTTTGAACCAATCCATGGCTCTAATGAGACACCTGCTCATGGATGCACAGGGCAAAATCCTGAAAATGATGGAGGACAACAAGCAGCTGGCTCAGCGGATCGATGGGGCCATCCAGTCGGCCAGTCAGGAGGTGACCAACCTGCGCTCCGAGCTGTCCGCCACCAGCCGCAGATTGGCCGAGTTGGGGGCGTGCAACCCCATCGGCCTGGAGAACAACCAGCAAaaccaccatcaccaccaccatcaccaccacctCCACGGTTCAAGTCAATAGGAGCGAGTCTTAATAGAGAACGCCCTGTCAGTCACCTCAAGGCTCTTGGAAAATCGCCCATCTCTCAGCAGCAGATGGTCCTGTCCTCTACGCTAGTCACTAAAACGGCCACAAATTTGCTCCCTTGTGGTGGACACTTCACAGCAGTGGCCAAAATGAAAAAGGAAGCATGCGCGGCCAAAGAAATTATGATTTTTAGTCAGCCTGAATAGTGTACTATTATTTGTATATATGGGTTGTGTGTGGGATggatatttaactttttttcataTCACTATAAAATTAAGTTTTGTTGTCCTTCTgctattttttgaaaat

Function

symbol description
kaznb Orthologous to human KAZN (kazrin, periplakin interacting protein).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061215-31 Orthologous to human KAZN (kazrin, periplakin interacting protein).

Ensembl:

ensembl_id ENSDARG00000006601

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007940 False 2782 nonsense_mediated_decay 0.51 14 25857941 25931082
TCONS_00007941 False 1882 mRNA 0.52 8 25882617 26040594
TCONS_00007942 False 2460 mRNA 0.52 10 25882617 26180714
TCONS_00007943 True 1286 processed_transcript 0.51 4 26020099 26180714

Neighbor

gene id symbol gene type direction distance location
XLOC_004156 tmem51b coding downstream 4729 25833219 ~ 25853212 (-)
XLOC_004155 skib coding downstream 28229 25782721 ~ 25829712 (-)
XLOC_004154 plch2b coding downstream 80623 25752198 ~ 25777318 (-)
XLOC_004153 brpf3a coding downstream 123524 25712772 ~ 25734417 (-)
XLOC_004152 CR933820.1 coding downstream 187986 25669839 ~ 25669955 (-)
XLOC_004158 prdm2b coding upstream 8989 26189703 ~ 26217510 (-)
XLOC_004159 foxj3 coding upstream 48204 26228918 ~ 26362334 (-)
XLOC_004160 utp3 coding upstream 189667 26370381 ~ 26375575 (-)
XLOC_004161 st3gal8 coding upstream 387778 26568492 ~ 26590429 (-)
XLOC_004162 efcc1 coding upstream 438419 26619133 ~ 26666627 (-)
XLOC_004063 CR854846.1 misc downstream 9730263 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 13166250 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 13236174 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 13266645 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 13344679 12512966 ~ 12513262 (-)
XLOC_004150 NA non-coding downstream 380961 25475305 ~ 25476980 (-)
XLOC_004147 NA non-coding downstream 449045 25368112 ~ 25408896 (-)
XLOC_004144 dre-mir-499 non-coding downstream 652698 25205153 ~ 25205243 (-)
XLOC_004142 CR628365.2 non-coding downstream 890054 24967771 ~ 24967887 (-)
XLOC_004165 CR847934.1 non-coding upstream 567578 26748292 ~ 26748429 (-)
XLOC_004167 NA non-coding upstream 1321491 27502205 ~ 27507973 (-)
XLOC_004169 NA non-coding upstream 1362864 27543578 ~ 27625465 (-)
XLOC_004173 BX601648.1 non-coding upstream 1603044 27783758 ~ 27806767 (-)
XLOC_004174 NA non-coding upstream 1620145 27800859 ~ 27809715 (-)

Expression


Co-expression Network