XLOC_000420 (si:ch211-194g2.4)


Basic Information

Item Value
gene id XLOC_000420
gene name si:ch211-194g2.4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 35862550 ~ 35867943 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000718
ACACAAACAAAGACCGTTCCCATCTATTCATCAGGGACTGTACTGTGTCATATCTGACACAAATGCATCTCCTGCTAGAGAGCTATTagacaaacacaaaacattttcaatatatactatatacaatGCCATTTAAAAGCTATATAAAGGGCCGTGTCCATCTACAAGTCTTGATCATTGGACTTCTCTTTGTACTTCCTGATACAGTCATTCCTCAAAGACTGAAGACACTGCTATCAGAACAGAGGGCACCAGGGGTTTGTGCGCTAGAGCCATCTATGACCTGCTGCTATGGATGGAGGAACATTAACGGTGTCTGTCAACCTATATGTAAGAGACCCTGTGAGAATGGATTCTGTATTGGGCCTGATCGATGCTCGTGCATGGAGGGCTACAAGGGCAAAGACTGCAGCGAAGatGTCAATGAGTGTGGGCTCCCAGAAAGGCCCTGTTCACACAGCTGCATGAACACAATGGGGAGTTACCGTTGTTTCTGCAATAATGGACACACTCTGGACACTGATGGCAAATCCTGCATCAAGAAACTGGACTGCATCTCCCTTCGCTGTCAGTTTGGTTGCCAAATTGACAGAAATGATGAAGTGGGCTGTGTCTGTCCTCCAGGATTACAACTTGCACCAGATTATAGAACCTGCAAAGacATCAATGAGTGTGATGATCCCTCACACACCTGCACAGAACAccagtcctgcaagaacacttttggGAGTTTCACTTGTGTCTGTAAAGACGGATTTATCTTGGGAACACTCCAAGACACAATCACTTGTCGAGGTATT

Function

symbol description
si:ch211-194g2.4 Predicted to enable calcium ion binding activity.

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-65 Predicted to enable calcium ion binding activity.

Ensembl:

ensembl_id ENSDARG00000094648

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000718 True 800 mRNA 0.45 6 35862550 35867943

Neighbor

gene id symbol gene type direction distance location
XLOC_000419 hhip coding upstream 26687 35790082 ~ 35835863 (+)
XLOC_000418 gab1 coding upstream 252891 35494837 ~ 35609659 (+)
XLOC_000417 usp38 coding upstream 371545 35473219 ~ 35491005 (+)
XLOC_000416 sc:d189 coding upstream 627850 35194454 ~ 35234700 (+)
XLOC_000415 NA coding upstream 769038 35034294 ~ 35093512 (+)
XLOC_000421 NA coding downstream 28449 35896392 ~ 35898437 (+)
XLOC_000422 BX276105.1 coding downstream 81326 35949269 ~ 35954313 (+)
XLOC_000423 mmaa coding downstream 88492 35956435 ~ 35970259 (+)
XLOC_000424 zgc:152968 coding downstream 117870 35985813 ~ 36002774 (+)
XLOC_000425 BX324156.1 coding downstream 286318 36154261 ~ 36154377 (+)
XLOC_000414 NA non-coding upstream 1001493 34857368 ~ 34861057 (+)
XLOC_000408 NA non-coding upstream 1408103 34450659 ~ 34454447 (+)
XLOC_000407 CR848003.1 non-coding upstream 1462196 34400240 ~ 34400354 (+)
XLOC_000403 dre-mir-734 non-coding upstream 1739578 34122880 ~ 34122972 (+)
XLOC_000431 NA non-coding downstream 1098057 36966000 ~ 36966282 (+)
XLOC_000432 FO704615.1 non-coding downstream 1255699 37123642 ~ 37123772 (+)
XLOC_000436 NA non-coding downstream 1723315 37591258 ~ 37638367 (+)

Expression


Co-expression Network