XLOC_004270



Basic Information


Item Value
gene id XLOC_004270
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36568924 ~ 36569266 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00008842
CAGATGGACTTACCCTTGGTTGGCCTTGTTGTGCTGGTTGGCAGATTTGTTTTTGAAGAtgataatataaaaacaacaaaatatcacaagAGGAATAACTTTTGGGAGTGGATTTTACTGTTGAAGCTGATAAAAAGAAAATTTGTAAATGTTCAACAAGTGAGTGTGTGCGACGAACAACCACATAAGTCAAAATGAGATAACCACATGGCATCAATTGTGTGAACTTTATATACATAAACAGTTTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00008842 True 248 lncRNA 0.35 2 36568924 36569266

Neighbor


gene id symbol gene type direction distance location
XLOC_004268 zbtb40 coding downstream 93800 36422233 ~ 36475124 (-)
XLOC_004267 psma5 coding downstream 217931 36342997 ~ 36350993 (-)
XLOC_004266 sort1a coding downstream 227735 36280523 ~ 36341189 (-)
XLOC_004265 nfya coding downstream 289260 36254284 ~ 36279664 (-)
XLOC_004264 NA coding downstream 322168 36242059 ~ 36246756 (-)
XLOC_004271 CR457444.8 coding upstream 51451 36620717 ~ 36627322 (-)
XLOC_004272 cacna2d3 coding upstream 119528 36688794 ~ 36765834 (-)
XLOC_004273 cacna1da coding upstream 224207 36793473 ~ 36964002 (-)
XLOC_004274 BX248521.2 coding upstream 440895 37010161 ~ 37015507 (-)
XLOC_004275 BX248521.1 coding upstream 469154 37038420 ~ 37044539 (-)
XLOC_004063 CR854846.1 misc downstream 20441246 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 23877233 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 23947157 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 23977628 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 24055662 12512966 ~ 12513262 (-)
XLOC_004257 NA non-coding downstream 827480 35578730 ~ 35741444 (-)
XLOC_004255 NA non-coding downstream 1127507 35438013 ~ 35441417 (-)
XLOC_004254 BX293991.1 non-coding downstream 1343785 35225022 ~ 35225139 (-)
XLOC_004249 NA non-coding downstream 1991818 34550847 ~ 34577106 (-)
XLOC_004276 NA non-coding upstream 516354 37085620 ~ 37095534 (-)
XLOC_004278 CR352285.1 non-coding upstream 728235 37297501 ~ 37298097 (-)

Expression



Co-expression Network