XLOC_004319 (CT033813.1)



Basic Information


Item Value
gene id XLOC_004319
gene name CT033813.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40182681 ~ 40182796 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00008222
gctggcagctagctctctgcaactcttgcATTGTTTTCCtcctgaagctaagcagggctgcgcccggtcattacctggatgggagaccacatgggaaagctaggttgctgccggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107379

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00008222 True 116 rRNA 0.56 1 40182681 40182796

Neighbor


gene id symbol gene type direction distance location
XLOC_004317 EMP3 coding downstream 10386 40134856 ~ 40172295 (-)
XLOC_004316 fam83e coding downstream 53959 40103720 ~ 40128722 (-)
XLOC_004315 tnfrsf9b coding downstream 81435 40088141 ~ 40101246 (-)
XLOC_004314 uts2b coding downstream 152542 40024182 ~ 40030139 (-)
XLOC_004313 CR847998.1 coding downstream 537371 39637740 ~ 39645310 (-)
XLOC_004320 trim62.2 coding upstream 44957 40227753 ~ 40257225 (-)
XLOC_004321 trim62.1 coding upstream 148995 40331791 ~ 40418975 (-)
XLOC_004322 tnfrsf1b coding upstream 248833 40431629 ~ 40457325 (-)
XLOC_004323 NA coding upstream 278055 40460851 ~ 40462487 (-)
XLOC_004324 si:dkeyp-61b2.1 coding upstream 284822 40467618 ~ 40504170 (-)
XLOC_004063 CR854846.1 misc downstream 24055003 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 27490990 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 27560914 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 27591385 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 27669419 12512966 ~ 12513262 (-)
XLOC_004312 NA non-coding downstream 877518 39303597 ~ 39305163 (-)
XLOC_004311 NA non-coding downstream 969916 39208184 ~ 39212765 (-)
XLOC_004308 CU210919.2 non-coding downstream 1092690 39089875 ~ 39089991 (-)
XLOC_004305 AL845324.2 non-coding downstream 1232930 38947987 ~ 38949751 (-)
XLOC_004330 FP236327.1 non-coding upstream 577922 40760718 ~ 40761318 (-)
XLOC_004331 CABZ01083815.1 non-coding upstream 675858 40858654 ~ 40860470 (-)
XLOC_004332 CABZ01044765.1 non-coding upstream 710970 40893766 ~ 40895245 (-)
XLOC_004333 NA non-coding upstream 766093 40948889 ~ 40949818 (-)

Expression



Co-expression Network