XLOC_004330 (FP236327.1)


Basic Information

Item Value
gene id XLOC_004330
gene name FP236327.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 40760718 ~ 40761318 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008240
ggctagtacactcaaaaaaatcaactaggcatgtattggatttacaaaataaaaatttgtcagattgaaaagaacaaatcaagtttacgtatgttaaatgattaattcatgttatttgaaactgaatcaagaaataatcaaatgaatttgatcagaacatgttgattcaatgagactgagacgcttcaaatcgacaactctcactctggagagtcacttcgcgcatatcagtaggtggcggtagtgcgtttggatgtcaccatacgaaaacaacaagaagaagtgtgttttcggcacagtttgggaattggttttcccaagagcttgaatgttatgcatgttattttgttggctaaatgtttcttatacattttatattacatattacaattttggatattatataacattttgtatcagaatattaaagaagaaattagtttaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105402

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008240 True 445 lncRNA 0.31 2 40760718 40761318

Neighbor

gene id symbol gene type direction distance location
XLOC_004329 tas1r3 coding downstream 18211 40731602 ~ 40742507 (-)
XLOC_004328 ccdc114 coding downstream 32338 40713723 ~ 40728380 (-)
XLOC_004327 si:ch211-222l21.1 coding downstream 64582 40677616 ~ 40696136 (-)
XLOC_004326 prxl2b coding downstream 113481 40622310 ~ 40647237 (-)
XLOC_004325 miip coding downstream 240832 40505044 ~ 40519886 (-)
XLOC_004331 CABZ01083815.1 coding upstream 97336 40858654 ~ 40860470 (-)
XLOC_004332 CABZ01044765.1 coding upstream 132448 40893766 ~ 40895245 (-)
XLOC_004333 NA coding upstream 187571 40948889 ~ 40949818 (-)
XLOC_004334 zgc:175088 coding upstream 316873 41078191 ~ 41084363 (-)
XLOC_004335 dnajc11b coding upstream 349079 41110397 ~ 41132296 (-)
XLOC_004063 CR854846.1 misc downstream 24633040 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 28069027 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 28138951 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 28169422 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 28247456 12512966 ~ 12513262 (-)
XLOC_004323 NA non-coding downstream 298231 40460851 ~ 40462487 (-)
XLOC_004319 CT033813.1 non-coding downstream 577922 40182681 ~ 40182796 (-)
XLOC_004313 CR847998.1 non-coding downstream 1115408 39637740 ~ 39645310 (-)
XLOC_004312 NA non-coding downstream 1455555 39303597 ~ 39305163 (-)
XLOC_004311 NA non-coding downstream 1547953 39208184 ~ 39212765 (-)
XLOC_004336 CABZ01087025.3 non-coding upstream 431011 41192329 ~ 41201272 (-)
XLOC_004338 NA non-coding upstream 521973 41283291 ~ 41316649 (-)

Expression


Co-expression Network