XLOC_004341 (megf6b)


Basic Information

Item Value
gene id XLOC_004341
gene name megf6b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 41712391 ~ 41779281 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008251
tgggaaacatccatacactcttattctcacacatacaatatggccaatttagcttacccaattcccctatagcgcttgcgcttggactgtgggggaaaccggagcaccggaggaaacccacaccaacacggggagaacatgcaaactccacacagaaatgccactgagccaccgcatcGCCTTAATCCAGTTTAGTAAGCTAAAATTAAGTTAACCCAGTGTTTTTCAGAGTGTAAAATGATCGATGGATCACATAATCTACAGCAGTTGTGCAATCAGAATTAAACTGAACAATAATCAATAGCCACAATTACacattattaatttttcttcgacttagttctttatttattagaggtcgtcacagcagaatgaaccgctaacttttccagcatatgttttacacagccaatgcccttccagccacaacccagtactgggaaacacctatacactctgactcacacactacgaccaatttagttaatccaattcacctatagcgcatgtatttggactgggagaaaccggaggaaacccacgccaacactgggagaacatgcaaactccacacagaaatgccaactgacccagccaaggctcgaaccagcgaccttcttgctgttaggccacagcgctaaccaatgagccactttGCTGCCCCACATTCACACAATAATGCTGGTAAATTATAGAGCAAAGTTATTTAATAATGCAGCAATTAAGACAAAATGAGAATAAGTTCCACTCAGAAGGCTCTTTATTGTGCATCAATGCTGTTAAATGCATGAACAGAAGCTTCAGAGctgatggaggaggaggaggaggtgaagaCTTTCTCACAGACAGGGAGGGAGTAAAACCCTTGTGTTTCAGATTTTTCCTCTCAGAACAACTTTAGCTTTCATCAAACATCTGCTGCTTGTTTCACATCAGATGTTAATGACTGAATATCTTGAATCATGTCAGGATGGCTCGGGCTCTGTCTTCTGTGCGTCGGGGTTAATATTCGTCCCGTTGATGTTGCCTATTATTCTGGCTATTGGCATCATTTGAGGCTCTGTCACAGGCCACAGTGTTTTCATGGATACAGCAGATTTAATATGGGATACTGGATACCAGATATTGACGAGTGCCAGGTTCATAACGGCGGCTGCCAGCACACATGTGTGAACACTAGGGGTTCGTATCACTGCCAGTGTAACGCCGGCTCTCGACTGCATGTGGACGGACGCACCTGCATCGCTGTTCAGTCCTGCGGCGTTGGGAATGGCGGCTGTGAGCATTTCTGTGTCCAGCAGACGGCGGGTCATGTCCAGTGTCGCTGCAGACCTGATTACAGACTGGACGCGGATGGAAAACACTGCACATTGGTGAACCCGTGTGCGGAGCAGAATGGCGGATGTTCTCAGATGTGTCATAGGGATGGAGCTCAGGCCCGCTGTGAATGTCATCCAGGTTATCAGCTCGCTGAAGACGGCAAGACATGTGAAGACATTGATGAGTGTGCGTTGGGTCAGACGGACTGTGCTCATGGCTGTCGTAACACCAGAGGAtccttcatgtgtgtgtgttctgctgccTATGAGCTCGGGGTGGACGGTAAACAGTGCTATCGTATTGAGATGGAGATCGTGAACAGCTGTGATCATGATAATGGTGGTTGTTCTCATCACTGTGAACATTCGACCGCTGGTCCGCTGTGCAGCTGTAATGAAGGATATCAGCTGGACCACGACCACAAGACCTGCGTCGATATAAACGAGTGTGTCGACGGCAGCTCGTGTTGTGAACATGACTGTACGAACTATCCTGGAGGATACGAGTGTTACTGTACAGCCGGATATCGACTGAACACTGACGGATGCAGCTGTGATGATATAGATGAGTGTTTGGCTGTTAATGGAGGATGTGATCATGCTTGTCTGAACAGCGCCGGCTCTTTCCAGTGTTCCTGTAGACGTGGATATCGACTCGATGAGGACAGAAGATCCTGCATACtgatggAGGAGTCAGTGGAGGCGTTGAGCAGCGGTCAGACAGTCAATAAACCTGGACCAGGACCTCAGCTCACCATCCTGCAGGACTTCGATCAGATCCTGGAGAAATACGAGGACTACGAGGACGACACTGGAGAACTGCGTGCCGAGAGCACTTTAGCTGAGAAATTCATTTGTTTGAACGATTCGTTCGGCGTTGACTGCAGTCTGTCCTGTGAGGACTGTGTGAACGGAGGAGTGTGtaacaaacacagaaatgcctgtGACTGTCCTGACGGATGGACTGGAGTCGTCTGTAATGAGAcATGCCCTGAGGGTTGGTTTGGCAGGAATTGCTCACTGTTGTGTAAGTGTAAGAACGGTGGTGTGTGTGATCCGGTGTCCGGGAGCTGTCGCTGTCCACCAGGGGTCAGTGGAGAGCTGTGTCAGGACGGCTGTCCGAAGGGTCTCTATGGGAAGTTTTGCAATAAAAGGTGTAACTGCGCTAATAACGGACGTTGTCATCGCACTTATGGAGCGTGTTTGTGTGACCCGGGACTGTATGGACGATTCTGCCACCTTCCGTGTCCGAAGTGGATGTTTGGTCCCGGTTGTTCAGAAGAGTGTCAGTGTGTCCAGCAGAACACTATAGAGTGTCACCGTCATCATGGAGACTGCATCTGCAAACCTGGATACAGAGGCCACACCTGCAAAGACGAGTGTGAATCAGGGTTTTTTGGCTCTGCTTGTGAGAATAAATGCTCTTGTCCGCCTGGAGTGACCTGTGATCATGTGACTGGAGCTTGTCAACCCAAATGTCCAGCTGGAAAAACAGGCGACAAATGTGACCAAGATTGTGTGGAAGGGAGATTTGGGATTGGATGCTCTCAGTCTTGTGACTGCTCTGGCGCACCATGTGACAAAGTGACTGGTCAATGCACGTGTCCTGCTGGAACGTTTGGAAAGCGCTGTGAAAAAGAGTGTCCTGAGGGCCGCTGGGGTCTGGGCTGTCAGGAATGGTGTCCGGTGTGCGAGAACGGAGGCCGCTGTGACCGGCGTAACGGCACATGTGTGTGTTCTCCTGGATTCATCGGCAGATTGTGTCAGAACTCATGTCCTGCGGGTCGCTTCGGTGTGGGCTGTCAGCTCAGATGTGTGTGTGATCTCGGAGTTCGCTGTAATCCTGTAAGCGGACGCTGCTCGTGTCCTCCAGGCTGGACGGGACACAACTGCAGGAAGGtgtgtgacGCGGGCCGCTGGGGTCTGGACTGTGAGAGTGTATGTGACTGTCGTAATGCTGACGGTGTGTGTGATGCTCAGACTGGACGCTGTCATTGTGAGGCCGGATTTACTGGAGCACGATGTGACCAGAAATGCCCGGCTGGCTCGTTTGGGCCCGGCTGTAAGCATCGCTGCCAGTGTGAAAATCAGGCATCATGTGACCACGTGGGCGGAGCTTGTACCTGTAAGACCGGCTGGACCGGAACCTTCTGTGAAAAACCCTGTCCGCAGGGTTTCTATGGTCTGGACTGtcagcagaagtgtgtgtgtttgaacggCGGTCTCTGTGATCATGTGAGCGGTCAGTGTTTCTGTAAGGCCGGATGGATCGGGACGCGCTGTAACCAGACGTGTCCTGCGGGATGGTTTGGCGTGAGCTGTTCTCAGACCTGTGTTTGTCACAATAACAGCAGCTGTGATGCAGTGAGCGGTCAGTGTGAATGCGGTGCAGGCTGGACAGGAGACACATGCTCACAGCGCTGTCCTGCAGGTGTGTTCGGGGACGGTTGTGTTCACAGGTGTTTGTGTCAGAACGGGGCCTCGTGTGACCCTGAGAGTGGACACTGCTTCTGTCCTAGCGGCTGGACGGGGGCCGCCTGTCAGCTTgaaTGTCCAGCGGGGAGGTTCGGCTCAGACTGTCAGGACAGATGTGAATGTGTGAATGGAGCTCAGTGTGATGGTCAGACGGGTCGCTGTGTTTGTCCGCCGGGCTGGACAGGAGAGCGCTGTGAGAATGagtgtgaACGGGGCTGGTTTGGCGTGGGTTGTGAGGACCGCTGTCAGTGTGATCACGGTGCTGTCTGCCATCACGTGAGCGGTCAGTGTCTCTGCCCTGCTGGATGGAGAGGAAGACGCTGTGAGAAAGcaTGTCTGCCGGGCTCATTTGGTCAGGATTGTGTCCAGCGCTGCTCTTGTCCGTCCGGCTCCTCGTGTCATCATGTGACCGGTCACTGTGGTTGTGCTCCAGGATTCACCGGCGACGGCTGTGAACACAGTTGTCTGCCTGGCACGTTCGGCCAGGACTGTAATCAGGTGTGTCAGTGTTCAGAAAGAAACCAGCTCTGCCACCCGGTGACTGGAGTGTGTTACTGCGCGCCCGGATTCACTGGACTCAAGTGTGAACAGACGTGTCCGCAGGGTTTGTACGGCTCAGGCTGTGAGCATCAGTGTGAGTGTCTGAATGGTGGAGTTTGTCTCTCAGACTCGGGATCCTGTCAGTGTCCAGCCGGATTCATTGGAGCTCAATGCAATCAAACATGTCCAGCGGGTCGCTATGGTCTGGACTGTGCTCATGTGTCAGCGTGTGGGACAGGAGTGAGGAATGATCCGGCTACAGGAAGATGCACTGCACATCAAGTCTGTCCTCCAGGTTGGTTTGGTTCTGGCTGTTCTCAGCGTTGTGACTGCAGTAACAGAGGTGTGTGTGACGGAGTCTCTGGAAACTGCTCATGTGCTCTCGGCTGGACCGGCAAACACTGTGATAAAGagTGTCCTGATGGCAGCTTTGGGCCTGACTGCTCTCTTCAGTGTTCCTGTCAGAATAACAGCACATGTGACCGAGTGACAGGAAGTTGTCATTGTCGTCCAGGATATTACGGTCATCTGTGTGAACACGcgtGTCCGGCTGGTCTCTTCGGCTCTGGGTGTCAGCAGCAGTGTGACTGTATGAACGGAGCCTCCTGTCATCCGGATACAGGACAGTGTGTGTGTCCCGCTGGAGTCCACGGCCCGCGCTGTCAGCACGTGTGTGCTCAGGGCAGGTTTGGTGTGAACTGCTCTCAGTCATGTGACTGTGCTGATGGAGCGTCATGTGACCCGGTCAGCGGCCGCTGTGTTTGTCCATCAGGGAAGACTGGAGTGCGGTGTGACAGCGACTGCAGTGTGAACCGGTTTGGCCCTGACTGCTCTCTGCTGTGCGAGTGTGAAAATGGAGCTCAGTGCGACAGCAGAAATGGACGCTGCTTCTGTCTGAGCGGCTGGATCGGCTTCACATGTTCACAGAGCGCTCCTCCAGAACTGAACTCCAGACGGTCAGAAGAGGATCAGCTTCAGCTCAACACTTCAtagcgtacacacacacacacacacacacacacacacacacacacacacagaataaatAATGTGTTGAAGTGTTTGCAGGTTCTGTCACACCCGCAGGAGCTCGCTGTGTTTTCTGTGCAGAAGAGAAAGCAAGAGTGCTGGAAAAcagaaattacacacacacacaca

Function

symbol description
megf6b Predicted to enable calcium ion binding activity. Orthologous to human MEGF6 (multiple EGF like domains 6).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-101112-3 Predicted to enable calcium ion binding activity. Orthologous to human MEGF6 (multiple EGF like domains 6).

Ensembl:

ensembl_id ENSDARG00000074808

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008251 True 5492 mRNA 0.52 34 41712391 41779281

Neighbor

gene id symbol gene type direction distance location
XLOC_004340 NA coding downstream 2334 41699575 ~ 41710057 (-)
XLOC_004339 CR759952.1 coding downstream 337265 41375011 ~ 41375126 (-)
XLOC_004338 NA coding downstream 395742 41283291 ~ 41316649 (-)
XLOC_004337 mrps16 coding downstream 489420 41216191 ~ 41222971 (-)
XLOC_004336 CABZ01087025.3 coding downstream 511119 41192329 ~ 41201272 (-)
XLOC_004342 CR847970.1 coding upstream 3402 41782683 ~ 41786522 (-)
XLOC_004343 mrto4 coding upstream 66778 41846059 ~ 41853874 (-)
XLOC_004344 her2 coding upstream 186836 41966117 ~ 41966854 (-)
XLOC_004345 NA coding upstream 196296 41975577 ~ 41999417 (-)
XLOC_004346 her15.2 coding upstream 215006 41994287 ~ 41996957 (-)
XLOC_004063 CR854846.1 misc downstream 25584713 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 29020700 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 29090624 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 29121095 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 29199129 12512966 ~ 12513262 (-)
XLOC_004333 NA non-coding downstream 762573 40948889 ~ 40949818 (-)
XLOC_004347 NA non-coding upstream 224882 42004163 ~ 42026598 (-)
XLOC_004348 NA non-coding upstream 237473 42016754 ~ 42019865 (-)
XLOC_004349 NA non-coding upstream 263281 42042562 ~ 42044281 (-)
XLOC_004352 NA non-coding upstream 333791 42113072 ~ 42125282 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000057_00257594_00301277 NA coding CI01000057 null 257571 ~ 301508 (-)