G1780


Basic Information

Item Value
gene id G1780
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 5318782 ~ 5319304 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU2462
cctgacaatacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccgtgacagtacctaggtaaggactactagccagttagaagcagagtatgagggcctgCCCAGgcgtacctaggtaaggactactagccagtcagaagcagagtatgagggtgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgtcctgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2462 True 295 lncRNA 0.38 2 5318782 5319304

Neighbor

gene id symbol gene type direction distance location
LOC120563443 NA coding upstream 121665 5180196 ~ 5197117 (+)
LOC120563472 NA coding upstream 139040 5158881 ~ 5179742 (+)
LOC120563603 stxbp6 coding upstream 369670 4947658 ~ 4949112 (+)
LOC120563657 NA coding upstream 379312 4856686 ~ 4939470 (+)
zgc:172076 NA coding upstream 512075 4783353 ~ 4806707 (+)
btbd3a LOC103354797,LOC102313104,LOC101466369,LOC100710091,LOC102793615,LOC104954790 coding downstream 42047 5361351 ~ 5371770 (+)
ndufaf5 ndufaf5 coding downstream 181728 5501032 ~ 5518108 (+)
LOC120564466 NA coding downstream 270365 5589669 ~ 5591008 (+)
LOC120564476 NA coding downstream 287150 5606454 ~ 5607801 (+)
LOC120563910 NA coding downstream 470993 5790297 ~ 5803234 (+)
G1759 NA non-coding upstream 22117 5284816 ~ 5296665 (+)
G1771 NA non-coding upstream 33438 5282947 ~ 5285344 (+)
G1761 NA non-coding upstream 93354 5224793 ~ 5225428 (+)
G1612 NA non-coding upstream 246847 5067789 ~ 5071935 (+)
LOC120563689 NA non-coding upstream 293860 5024030 ~ 5024922 (+)
G1782 NA non-coding downstream 4932 5324236 ~ 5324489 (+)
G1773 LOC108251774,LOC106535048,LOC107394211 non-coding downstream 16043 5335347 ~ 5340471 (+)
G1772 NA non-coding downstream 21288 5340592 ~ 5345899 (+)
G1784 NA non-coding downstream 29808 5349112 ~ 5414538 (+)
G1786 NA non-coding downstream 56274 5375578 ~ 5377774 (+)
G1756 NA other upstream 96038 5218068 ~ 5222744 (+)
G1600 NA other upstream 280068 4977783 ~ 5038714 (+)
G1487 LOC103369331 other upstream 858378 4455207 ~ 4460404 (+)
pex6 pex6,LOC104944420,LOC104961583 other upstream 882696 4408438 ~ 4436086 (+)
LOC120562910 NA other upstream 1504212 3792746 ~ 3814570 (+)
G1775 NA other downstream 53313 5372617 ~ 5374907 (+)
acaa1 acaa1,LOC102793903 other downstream 68089 5387393 ~ 5471409 (+)
snrpb2 snrpb2 other downstream 557243 5876547 ~ 5916374 (+)
LOC120573424 lgalsl,LOC104947409 other downstream 1066297 6385601 ~ 6402640 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other downstream 1088096 6407400 ~ 6437217 (+)

Expression


Co-expression Network