G2374


Basic Information

Item Value
gene id G2374
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7147274 ~ 7148484 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3320
GGTTTCCTCGGTGGTCCGACAGCTGCTCCACCACGTTGGGCTGAGGAAGAGTCGGCTCAGTCTCCCCTggttctgctgcttcagagagagaaggaagccAGTTTGACATTTCCTCCTCCAAAAGCCTTTCTTCCTCCAACAGCCTCTCTTCCTCTGGACTTGCTGCTTCTTTTGGATCCGGCGAGGCAGTCTCTGGATCCGGCGAGGCCTCCTCTGTAACCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGATCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCCATCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCCATCTCTGGAGCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGATCCGACGAGGCCATCTCTGGATCCGACGAGGCCATCTCTGGATCCGACGAGGCTTCCTCTGGATCCGACGAGGCTCTCTCTGGATGCGTCAAAGCTTCCTCTAGATACGAAGATTCCTCCACATTAGCAGCCGGGCTGCCTGTGGCGGGTCTGAGCGGCTCCTGGCTCTGACCGCCGCGTTGCTGCTGGGAAGAGGCAGGAGGGACGGCTGAGTCGGACTGGCGGAAAGAGGTTTTAGTGGCACCTCTTCCCGATCGAGAGGTCCCCTGTGTGGATGCCGAGACTGGAAGGTCATCCACC
>TU3327
GGTTTCCTCGGTGGTCCGACAGCTGCTCCACCACGTTGGGCTGAGGAAGAGTCGGCTCAGTCTCCCCTggttctgctgcttcagagagagaaggaagccAGTTTGACATTTCCTCCTCCAAAAGCCTTTCTTCCTCCAACAGCCTCTCTTCCTCTGGACTTGCTGCTTCTTTTGGATCCGGCGAGGCAGTCTCTGGATCCGGCGAGGCCTCCTCTGTAACCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGATCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCTCTGGAGCCGACGAGGCCGTCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCCATCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGATCCGACGAGGCCATCTCTGGATCCGACGAGGCCATCTCTGGATCCGACGAGGCTTCCTCTGGATCCGACGAGGCTCTCTCTGGATGCGTCAAAGCTTCCTCTAGATACGAAGATTCCTCCACATTAGCAGCCGGGCTGCCTGTGGCGGGTCTGAGCGGCTCCTGGCTCTGACCGCCGCGTTGCTGCTGGGAAGAGGCAGGAGGGACGGCTGAGTCGGACTGGCGGAAAGAGGTTTTAGTGGCACCTCTTCCCGATCGAGAGGTCCCCTGTGTGGATGCCGAGACTGGAAGGTCATCCACC
>TU3334
GGTTTCCTCGGTGGTCCGACAGCTGCTCCACCACGTTGGGCTGAGGAAGAGTCGGCTCAGTCTCCCCTggttctgctgcttcagagagagaaggaagccAGTTTGACATTTCCTCCTCCAAAAGCCTTTCTTCCTCCAACAGCCTCTCTTCCTCTGGACTTGCTGCTTCTTTTGGATCCGGCGAGGCAGTCTCTGGATCCGGCGAGGCCTCCTCTGTAACCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGTATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCTCCTCTGGATCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGATCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCGCTGGAGCCGACGAGGCCGTCTCTGGAGCCGACGAGGCCGTCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCCATCTCTGGAGCCGACGAGGCTCCCTCTGGATCCGACGAGGCCATCTCTGGAGCCGACGAGGCTTCCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGAGCCGACGAGGCCATCTCTGGATCCGACGAGGCCATCTCTGGATCCGACGAGGCTTCCTCTGGATCCGACGAGGCTCTCTCTGGATGCGTCAAAGCTTCCTCTAGATACGAAGATTCCTCCACATTAGCAGCCGGGCTGCCTGTGGCGGGTCTGAGCGGCTCCTGGCTCTGACCGCCGCGTTGCTGCTGGGAAGAGGCAGGAGGGACGGCTGAGTCGGACTGGCGGAAAGAGGTTTTAGTGGCACCTCTTCCCGATCGAGAGGTCCCCTGTGTGGATGCCGAGACTGGAAGGTCATCCACC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU3320 False 1127 lncRNA 0.44 2 7147274 7148484
TU3327 True 1169 lncRNA 0.47 3 7147274 7148484
TU3334 False 1001 lncRNA 0.42 3 7147274 7148484

Neighbor

gene id symbol gene type direction distance location
LOC120569727 NA coding upstream 345155 6802005 ~ 6802119 (+)
LOC120569789 NA coding upstream 345758 6801402 ~ 6801516 (+)
LOC120569812 NA coding upstream 347586 6799575 ~ 6799688 (+)
LOC120569778 NA coding upstream 348670 6798490 ~ 6798604 (+)
LOC120569765 NA coding upstream 349694 6797466 ~ 6797580 (+)
trnae-uuc_10 NA coding downstream 18112 7166596 ~ 7166667 (+)
trnae-uuc_11 NA coding downstream 18618 7167102 ~ 7167173 (+)
trnae-uuc_12 NA coding downstream 19136 7167620 ~ 7167691 (+)
trnae-uuc_13 NA coding downstream 19648 7168132 ~ 7168203 (+)
trnae-uuc_14 NA coding downstream 21901 7170385 ~ 7170456 (+)
G2361 NA non-coding upstream 61015 7085736 ~ 7086259 (+)
G2355 NA non-coding upstream 91467 7055267 ~ 7055807 (+)
LOC120562278 NA non-coding upstream 118152 7026754 ~ 7029122 (+)
G2335 NA non-coding upstream 188944 6957681 ~ 6958330 (+)
G2333 NA non-coding upstream 211127 6935889 ~ 6936147 (+)
G2386 NA non-coding downstream 93337 7241821 ~ 7243472 (+)
G2428 NA non-coding downstream 236648 7385132 ~ 7385353 (+)
G2486 NA non-coding downstream 405556 7554040 ~ 7557441 (+)
G2505 fam161a,LOC102790424 non-coding downstream 440159 7588643 ~ 7591076 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding downstream 453549 7602033 ~ 7603591 (+)
G1973 NA other upstream 612904 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 710057 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 744634 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1230900 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1675865 5387393 ~ 5471409 (+)
G2530 NA other downstream 550781 7699265 ~ 7699540 (+)
G2557 NA other downstream 793063 7941547 ~ 7948253 (+)
G2590 NA other downstream 941329 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1253231 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1468899 8617383 ~ 8643702 (+)

Expression


Co-expression Network