G2428


Basic Information

Item Value
gene id G2428
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7385132 ~ 7385353 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3407
gaacgcgccgctggattgggaaaccctgagttgactgaactagttgttaaccagtgCCGTGACAccggttatgcgggaccgcggttgttagggttagtgaagccgggtaactgaaagagatccagggcatgttgatcttgattcgtagtacaggcctctgctgCTGACCAGCTAAATCAGGGAGAGTGGATGCAGGTTTGCCTCATTAGGTCTTTTCTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3407 True 222 lncRNA 0.52 1 7385132 7385353

Neighbor

gene id symbol gene type direction distance location
LOC120565053 NA coding upstream 145539 7238071 ~ 7239593 (+)
trnae-uuc_49 NA coding upstream 171576 7213485 ~ 7213556 (+)
trnae-uuc_48 NA coding upstream 172098 7212963 ~ 7213034 (+)
trnae-uuc_47 NA coding upstream 173127 7211934 ~ 7212005 (+)
trnae-uuc_46 NA coding upstream 175690 7209371 ~ 7209442 (+)
LOC120568176 NA coding downstream 4746 7390099 ~ 7437258 (+)
pus10 pus10 coding downstream 227570 7612923 ~ 7640109 (+)
LOC120570741 NA coding downstream 308232 7693585 ~ 7703831 (+)
LOC120563246 NA coding downstream 333603 7718956 ~ 7743994 (+)
LOC120563293 NA coding downstream 372333 7757686 ~ 7765391 (+)
G2386 NA non-coding upstream 141660 7241821 ~ 7243472 (+)
G2374 NA non-coding upstream 236648 7147274 ~ 7148484 (+)
G2361 NA non-coding upstream 298873 7085736 ~ 7086259 (+)
G2355 NA non-coding upstream 329325 7055267 ~ 7055807 (+)
LOC120562278 NA non-coding upstream 356010 7026754 ~ 7029122 (+)
G2486 NA non-coding downstream 168687 7554040 ~ 7557441 (+)
G2505 fam161a,LOC102790424 non-coding downstream 203290 7588643 ~ 7591076 (+)
G2512 cct4,LOC102790717,LOC104959023 non-coding downstream 216680 7602033 ~ 7603591 (+)
G2523 NA non-coding downstream 273051 7658404 ~ 7659023 (+)
G2524 NA non-coding downstream 274047 7659400 ~ 7660095 (+)
G1973 NA other upstream 850762 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 947915 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 982492 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1468758 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1913723 5387393 ~ 5471409 (+)
G2530 NA other downstream 313912 7699265 ~ 7699540 (+)
G2557 NA other downstream 556194 7941547 ~ 7948253 (+)
G2590 NA other downstream 704460 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1016362 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1232030 8617383 ~ 8643702 (+)

Expression


Co-expression Network