LOC120562278


Basic Information

Item Value
gene id LOC120562278
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 7026754 ~ 7029122 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639730.1
ACAGCCAAACTGTTTCAACAAGGACATCGCCAAAACAAGAAGAATGTTGAGTATGTGTTGGCTGCGTGCAGGATTAATTCTACAGCAGCCATGTGTTGTCTTCTTCACAAAAAAGATCCTATTTGAACAGCATACACAATCAAATGCTTTATAGTGggCATGGATGAAGACGCCATCAACGAGGCCACTGAAGAAACCAGTGTTGGGATTTATGTTCTTAAAGAACATGCTTCAAGTGATGAACCAGGGGACATTGGTATTGTCCTTGAAGGCATCAAGATGTTGCAAGATCTTTATAATGTAGCATTACCTGTTGCTACGCTGTTTGGACTAATGTACAGTATGCCCTGAACTTCAGCTACCCTGCTTGCCTTTGATCCAAAAGATTTGCATGGAACTTGAGGAGGGAAACTTAC

Function

GO: NA

KEGG:

id description
ko01040 Biosynthesis of unsaturated fatty acids
ko04146 Peroxisome

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639730.1 True 416 lncRNA 0.42 3 7026754 7029122

Neighbor

gene id symbol gene type direction distance location
LOC120569727 NA coding upstream 224635 6802005 ~ 6802119 (+)
LOC120569789 NA coding upstream 225238 6801402 ~ 6801516 (+)
LOC120569812 NA coding upstream 227066 6799575 ~ 6799688 (+)
LOC120569778 NA coding upstream 228150 6798490 ~ 6798604 (+)
LOC120569765 NA coding upstream 229174 6797466 ~ 6797580 (+)
trnae-uuc_10 NA coding downstream 137474 7166596 ~ 7166667 (+)
trnae-uuc_11 NA coding downstream 137980 7167102 ~ 7167173 (+)
trnae-uuc_12 NA coding downstream 138498 7167620 ~ 7167691 (+)
trnae-uuc_13 NA coding downstream 139010 7168132 ~ 7168203 (+)
trnae-uuc_14 NA coding downstream 141263 7170385 ~ 7170456 (+)
G2335 NA non-coding upstream 68424 6957681 ~ 6958330 (+)
G2333 NA non-coding upstream 90607 6935889 ~ 6936147 (+)
G2325 NA non-coding upstream 141850 6883354 ~ 6884904 (+)
G2324 NA non-coding upstream 144320 6881962 ~ 6882434 (+)
G2273 NA non-coding upstream 167167 6857142 ~ 6859587 (+)
G2355 NA non-coding downstream 26145 7055267 ~ 7055807 (+)
G2361 NA non-coding downstream 56614 7085736 ~ 7086259 (+)
G2374 NA non-coding downstream 118152 7147274 ~ 7148484 (+)
G2386 NA non-coding downstream 212699 7241821 ~ 7243472 (+)
G2428 NA non-coding downstream 356010 7385132 ~ 7385353 (+)
G1973 NA other upstream 492384 6532441 ~ 6534370 (+)
aftpha LOC102296338,LOC102796226,LOC101483123,LOC102200161 other upstream 589537 6407400 ~ 6437217 (+)
LOC120573424 lgalsl,LOC104947409 other upstream 624114 6385601 ~ 6402640 (+)
snrpb2 snrpb2 other upstream 1110380 5876547 ~ 5916374 (+)
acaa1 acaa1,LOC102793903 other upstream 1555345 5387393 ~ 5471409 (+)
G2530 NA other downstream 670143 7699265 ~ 7699540 (+)
G2557 NA other downstream 912425 7941547 ~ 7948253 (+)
G2590 NA other downstream 1060691 8089813 ~ 8091505 (+)
LOC120565323 NA other downstream 1372593 8401715 ~ 8415076 (+)
socs7 socs7 other downstream 1588261 8617383 ~ 8643702 (+)

Expression


Co-expression Network