G2685


Basic Information

Item Value
gene id G2685
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8460087 ~ 8463648 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3745
TTTCCCCATATTTATTTGAAACGATTTCAAAATGGTAAAAACATGGTTGATTAACATGAAATGACCACAGGGTTCCTGCTCCGAGAGCGGACGCGGTGACGACAGGAGGAGACACAAAACGTGTCGGGAGTGAAGTTCAATTGTGTTTTCATCTGCCACCCACACCTTCACTACAGAACCCACCACACAGATTTATACAAACAGGACCCCCCAAAATGTTGGCTCGTtggcaaaaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgtcttatTCACCCTGAAGGCCAAAACATCCAGAGACGTGCTACAGAGAGTCCATCAGACCGGGAACATTGTTATAATCATTTCTCTTTCCTATATTACAAGCTTTTTACAACATAAAAATAGATCAATAACTATGATTACCATACTCCTTAATGTAAATATACAatatttattgcattttcaaatAAACTTGTTTCTTATTTACCTTGTTGTCGCCATCTTTCCCCCCCTAAAAATGAACCAAAGATAATAAAAAGCACTGGTACCGATGAGTGAGAACAGATGTGTGTAAGGCTggaccagcagggggcgctgcagCACTGAGAATCTCAGCATTACTTTTTGTTCATCTTAGGTTGAATATGAAGTGATATTAGTGttttaaagaaaagtaaaataacCTCCACCTGCTTTAACAGTTTCTCTGGCACTtaagtgttcattttttttcttcttcttttggttAGCTGCTACCAACTACAATCTGCACAAACTGCTCCTTGCATagcaataaaacaatatatatatcgTCCTCCTCTGGCTGTACagtcctatcaaataaaaagGGACACCAGTAGCAAAGTAGTGATGGGGAGGATTCAGAACAGAGTTGAGCTTTTAGACCGACTTGTGTGGACAGAAAGTTAGATAAAGGATCCCTTATAAACACCTCCCACACTCTGCACTGCAAACCTACAGctaaggctacatctacactgctatggtttatttttatttgtttttaagcagcgtccacacaacacacagtttaagctccagtagcagaactaatctaacctgactccgccagatggattcgcatttgctcggcatatccatctgggaactttccgttggagaacttttgggaagggggcgaaaatcctggttagccgattggataaaccatctgtctatctaccacccatagttggtgatagacggggccaaatcaaccaatcagatcaaactcttgccgaaaccagtcgggagaagagcaaaaacatcttttcctccgagaaaagcctccagtgtcgttttttttttttttgctcttctttcaaagaaggaatactttctaattcggataaaacttgctgttatagctacgctcatctcaatccgttgtttagactgaacggtcgcttctcgttgcgtcacaccatCTTAATCTCCATCCATACTAACACGTCTGACAACGCATATCACATGACCGTTCACGCACACGCTGGGCACGTGCGTGACGCTGTAAACAGGAAGCCGATTGTCTGACGTTGCTCTGCGGTTGGTAATAACGGACGTAGAAGTTGAAAACACAGAAActactttggagaaagaacaacaagggggaaaagtaagagcagggattAATTAGCTTGGGGCGACAACGAGGTGGAACGGTTACCGAAAGGTCTGTACGCTACCTCACCGATAAGACTGACGGACGTGCGTCCTCGTTTCCAAGCGTCTCCGTTTGTGCCGGTCCAGACTAGTACGCAACCCCCCCGAGTGTTTAAACCATAACAGAGCAGCAGtgttttccaaatgtctccgttttaggggcAGTAGAGGGGGCGCGAGGCGAAAACGTAGCAAAAGAAGAACCGTAGTAGTGCAGATGTAGCTTAAATCAAACATACTTGGGTATGTACACAATGTACacaacgtacacacacacattaacttaGTGTTGTTACCTCACAGGAACCCCGGTGGGTTCGGAGAGAGAGACGCGGACTACATGAACTACAGTTTGTCAAAcacaaaaaaggtaaaaattaGGAATGAACCCTCTTAGTTTTTCTAGATTATTTTTTGAActgtgacccccccccccccagggtcTTCTGTGGTCATAAGTGCATAAATAAGATATCATGCACAGTGTCTCGGTTTAGCAGTTTATCTGCCGTGCAACATCGCCTGAAGATGGAAATATAAAACACCCCTGACTTAAGGAATGTAGGggatacacaaaaaaaaaagaaaaagaagaagcaggAAATAGTCCCTGTCGaagtgtaaatgtaaaatgaccAGGCAAGGCATCGGTCATAACTTGGCCAGCTTTCTATGAATGCTTTTCGTCCATAATTGAGAGGAATTATTCAAAACATGtcaattatatttaaaatgtgtatggAAACTGTCCTGTTGGAGTTCATCTGACTCCACCTGCTTTTGGCACACTGACACAGAGAGTTGTTTCAAAAACGCACCCTCACTTGGCACTGCTGGAATGGCTATTTAAGACAAAAtataacccccccccaaaaaaataaaaaaataatatcaacTGTTAAGCCCCCCACATTCATGGCATCATCAGTTTTGTGTAGGAATCCACCTGCTCAAAACATGAATTCAAAACTTTCCATTCGTAGTGTTGAATTTCTTTTAACCCCGACACCAAAATAATAAAGTCAAACGTTATTCAGAATTATGAAAACCACCGTTAGTATCACGATTatgcgttaaaaaaaaaaagaaagaaggtgGAATGCACAGATGATTTTGGAAGTGTTCGGAGCTTGGTCCTGATATGTTTGTTGACCAGAAGCCTCTGCGTCCCGGCAGCAGAGGAGCAGTCGAGGTGGTCGGAGGTCGGAGCGTCCGGTCCTGACCTCCGAGTGGTTGGTTTGTTCTCTCGTGCAAAGACAGAAGGTGAGCGGCGAGTCGTGGTGTTTACTTTGTGCTTCCAGCTTTTAGTGTtggtgtgtatgttgtgtgatTTGAGTGCTtcttcacctctctctctgtctctccctctctctctccctgtctctctccctctctctctccctctctctctctctctctctctccaaccgTCCGTCTGTCGAGTCGGCTGACTGAGAGTTAAAGTCCTGAGCTGAGGGTCCGTTCACCTCCCCACCGGGGGGGCAGGAGGAGCTCCTCTCATCACGCCtaaaagggagggaggagaaacgAGATGGAGGGTCACTACagggagcacacacacagagacacacagacagagagagagagagacag
>TU3746
TTTCCCCATATTTATTTGAAACGATTTCAAAATGGTAAAAACATGGTTGATTAACATGAAATGACCACAGGGTTCCTGCTCCGAGAGCGGACGCGGTGACGACAGGAGGAGACACAAAACGTGTCGGGAGTGAAGTTCAATTGTGTTTTCATCTGCCACCCACACCTTCACTACAGAACCCACCACACAGATTTATACAAACAGGACCCCCCAAAATGTTGGCTCGTtggcaaaaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgtcttatTCACCCTGAAGGCCAAAACATCCAGAGACGTGCTACAGAGAGTCCATCAGACCGGGAACATTGTTATAATCATTTCTCTTTCCTATATTACAAGCTTTTTACAACATAAAAATAGATCAATAACTATGATTACCATACTCCTTAATGTAAATATACAatatttattgcattttcaaatAAACTTGTTTCTTATTTACCTTGTTGTCGCCATCTTTCCCCCCCTAAAAATGAACCAAAGATAATAAAAAGCACTGGTACCGATGAGTGAGAACAGATGTGTGTAAGGCTggaccagcagggggcgctgcagCACTGAGAATCTCAGCATTACTTTTTGTTCATCTTAGGTTGAATATGAAGTGATATTAGTGttttaaagaaaagtaaaataacCTCCACCTGCTTTAACAGTTTCTCTGGCACTtaagtgttcattttttttcttcttcttttggttAGCTGCTACCAACTACAATCTGCACAAACTGCTCCTTGCATagcaataaaacaatatatatatcgTCCTCCTCTGGCTGTACagtcctatcaaataaaaagGGACACCAGTAGCAAAGTAGTGATGGGGAGGATTCAGAACAGAGTTGAGCTTTTAGACCGACTTGTGTGGACAGAAAGTTAGATAAAGGATCCCTTATAAACACCTCCCACACTCTGCACTGCAAACCTACAGctaaggctacatctacactgctatggtttatttttatttgtttttaagcagcgtccacacaacacacagtttaagctccagtagcagaactaatctaacctgactccgccagatggattcgcatttgctcggcatatccatctgggaactttccgttggagaacttttgggaagggggcgaaaatcctggttagccgattggataaaccatctgtctatctaccacccatagttggtgatagacggggccaaatcaaccaatcagatcaaactcttgccgaaaccagtcgggagaagagcaaaaacatcttttcctccgagaaaagcctccagtgtcgttttttttttttttgctcttctttcaaagaaggaatactttctaattcggataaaacttgctgttatagctacgctcatctcaatccgttgtttagactgaacggtcgcttctcgttgcgtcacaccatCTTAATCTCCATCCATACTAACACGTCTGACAACGCATATCACATGACCGTTCACGCACACGCTGGGCACGTGCGTGACGCTGTAAACAGGAAGCCGATTGTCTGACGTTGCTCTGCGGTTGGTAATAACGGACGTAGAAGTTGAAAACACAGAAActactttggagaaagaacaacaagggggaaaagtaagagcagggattAATTAGCTTGGGGCGACAACGAGGTGGAACGGTTACCGAAAGGTCTGTACGCTACCTCACCGATAAGACTGACGGACGTGCGTCCTCGTTTCCAAGCGTCTCCGTTTGTGCCGGTCCAGACTAGTACGCAACCCCCCCGAGTGTTTAAACCATAACAGAGCAGCAGtgttttccaaatgtctccgttttaggggcAGTAGAGGGGGCGCGAGGCGAAAACGTAGCAAAAGAAGAACCGTAGTAGTGCAGATGTAGCTTAAATCAAACATACTTGGGTATGTACACAATGTACacaacgtacacacacacattaacttaGTGTTGTTACCTCACAGGAACCCCGGTGGGTTCGGAGAGAGAGACGCGGACTACATGAACTACAGTTTGTCAAAcacaaaaaaggtaaaaattaGGAATGAACCCTCTTAGTTTTTCTAGATTATTTTTTGAActgtgacccccccccccccagggtcTTCTGTGGTCATAAGTGCATAAATAAGATATCATGCACAGTGTCTCGGTTTAGCAGTTTATCTGCCGTGCAACATCGCCTGAAGATGGAAATATAAAACACCCCTGACTTAAGGAATGTAGGggatacacaaaaaaaaaagaaaaagaagaagcaggAAATAGTCCCTGTCGaagtgtaaatgtaaaatgaccAGGCAAGGCATCGGTCATAACTTGGCCAGCTTTCTATGAATGCTTTTCGTCCATAATTGAGAGGAATTATTCAAAACATGtcaattatatttaaaatgtgtatggAAACTGTCCTGTTGGAGTTCATCTGACTCCACCTGCTTTTGGCACACTGACACAGAGAGTTGTTTCAAAAACGCACCCTCACTTGGCACTGCTGGAATGGCTATTTAAGACAAAAtataacccccccccaaaaaaataaaaaaataatatcaacTGTTAAGCCCCCCACATTCATGGCATCATCAGTTTTGTGTAGGAATCCACCTGCTCAAAACATGAATTCAAAACTTTCCATTCGTAGTGTTGAATTTCTTTTAACCCCGACACCAAAATAATAAAGTCAAACGTTATTCAGAATTATGAAAACCACCGTTAGTATCACGATTatgcgttaaaaaaaaaaagaaagaaggtgGAATGCACAGATGATTTTGGAAGTGTTCGGAGCTTGGTCCTGATATGTTTGTTGACCAGAAGCCTCTGCGTCCCGGCAGCAGAGGAGCAGTCGAGGTGGTCGGAGGTCGGAGCGTCCGGTCCTGACCTCCGAGTGGTTGGTTTGTTCTCTCGTGCAAAGACAGAAGGTGAGCGGCGAGTCGTGGTGTTTACTTTGTGCTTCCAGCTTTTAGTGTtggtgtgtatgttgtgtgatTTGAGTGCTtcttcacctctctctctgtctctctctgtctctccctgtctctctccctgtctctctccctctctctctccctctctctctctctctctctctctctctccaaccgTCCGTCTGTCGAGTCGGCTGACTGAGAGTTAAAGTCCTGAGCTGAGGGTCCGTTCACCTCCCCACCGGGGGGGCAGGAGGAGCTCCTCTCATCACGCCtaaaagggagggaggagaaacgAGATGGAGGGTCACTACagggagcacacacacagagacacacagacagagagagagagagacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3745 False 3415 lncRNA 0.44 2 8460087 8463648
TU3746 True 3431 lncRNA 0.56 2 8460087 8463648

Neighbor

gene id symbol gene type direction distance location
LOC120558872 NA coding upstream 79387 8372857 ~ 8380700 (+)
LOC120558930 NA coding upstream 245046 8211071 ~ 8215041 (+)
LOC120558905 NA coding upstream 344893 8109343 ~ 8115194 (+)
ccsapa NA coding upstream 395587 8052523 ~ 8064500 (+)
acta1a actc1a,act2,zgc:86709,LOC105024319,LOC102689871,LOC100534413 coding upstream 410700 8038319 ~ 8049387 (+)
mrpl45 mrpl45 coding downstream 99400 8563048 ~ 8575327 (+)
sp2 sp2 coding downstream 184411 8648059 ~ 8669290 (+)
si:ch211-69b7.6 NA coding downstream 241219 8704867 ~ 8714096 (+)
mrpl4 mrpl4,LOC102794479 coding downstream 257084 8720732 ~ 8732510 (+)
col9a1a LOC103359055,LOC101077226 coding downstream 282284 8745932 ~ 8774048 (+)
G2646 NA non-coding upstream 20835 8289896 ~ 8439252 (+)
G2595 NA non-coding upstream 134828 8099027 ~ 8325259 (+)
G2602 NA non-coding upstream 156763 8194013 ~ 8303324 (+)
G2614 NA non-coding upstream 162137 8167739 ~ 8297950 (+)
G2631 NA non-coding upstream 171120 8251279 ~ 8288967 (+)
G2687 NA non-coding downstream 3413 8467061 ~ 8495618 (+)
G2670 NA non-coding downstream 6906 8470554 ~ 8509264 (+)
G2689 NA non-coding downstream 11249 8474897 ~ 8477720 (+)
G2692 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 non-coding downstream 22094 8485742 ~ 8512923 (+)
G2666 NA non-coding downstream 22470 8486118 ~ 8520808 (+)
LOC120565323 NA other upstream 45011 8401715 ~ 8415076 (+)
G2590 NA other upstream 368582 8089813 ~ 8091505 (+)
G2557 NA other upstream 511834 7941547 ~ 7948253 (+)
G2530 NA other upstream 760547 7699265 ~ 7699540 (+)
G1973 NA other upstream 1925717 6532441 ~ 6534370 (+)
socs7 socs7 other downstream 153735 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 206523 8670171 ~ 8702455 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other downstream 427667 8891315 ~ 8911908 (+)
G3091 NA other downstream 1008452 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other downstream 1028615 9492263 ~ 9512693 (+)

Expression


Co-expression Network