G3091


Basic Information

Item Value
gene id G3091
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9472100 ~ 9531976 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4341
ACCTTGGACAAGGTTGGACTACAGCGTCAGCAAAGACCACAGAAGAAAGGCAAATTTCAAAAAACTCTCAAGACACCCACTATGTGGGCTGTGGTGGCATTGCCAAATAACAAgaaaaataatcataataaaaaacaaattaaaacatatttGCTTTCTAGAtctacaatatttttttttttctctatttgtCATTGCAATTCAGGAAGGTGCGCTACATAATCCGGTCAGGGGTTGAGGAGAGGGCTTGAGGGAAGTTATTGAGGacacttccctttttttttttttgtggatcaAAATAAAGCCGCCGCAGAGAAGCTAAAAAGGAGCACCCCAGGCTGCCGAGCGGAAAAGCCGACGAAATCAGAAACTGACAGtcatttcctgtctgtctgtctgtctgtctgtctgttacacCACGGCCTCTCAGGTCCGTGACAGTAGTGCATTTAGGCGAAGGGGATTAAAAGTCCATCCTCTGAAGATGCATGCGGGTAAACATGACAACAATGAGAATATTTCACAAAACAGAACGATGTGTTAATGGTTGGCAGCATCTGGAGCAGTGAGAGCTTTTGGTGTCTGAGTGGTTCAGCAGTATCTTTGGTCAGTTTGAATTAAGGTGCAGTTTTCTctatctttcttttcttttcttttttttaaaactttgctTACATTTTGATGGGGTGAAGTGGGAGTTAAAGAGGGTGGATGGGAGGGTTATTAAaggttggttttttttgtccaaaaCGAATGCGCTGTTGTTTCCATTAACAGCTGGTCCGGCATCAGGacctttttgttattattttttttagatgccGATGCAATCCGAATGGTATGCAGCGCTTCTATAGGAGCCCagccaaataaaaataaaaaaagcacacGCCCACTTCTTTGTCTTCCAGGCCTGGGGCTCCTCCCacttccttatttttttttttagcacttcCTCTATCCTCAAATGCCCTCTCGCCCTCGCCTCACTACCGGCCCTGCCGACAACTACGACCATCTACAAAAACAGTGCAATGTCTATTCATAGGCACACTGGGGTACGAATACagcacacagagggagagaggaacaCTATACACCCATACAGTATGttacatgtcacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacac
>TU4342
gcacacacacacacacacacacacacacagacagacagacagacagacagacagacagacagacagagacgtcagcagcagcagctctggcCTCGTGGTGGTTGTGGTGCAGCCTGCAGAGACAGAGCGGTGAAGACGGCCACTGttttggagaggagaggaccaggagCACGGTGGCAATTTACTCCCATTTTGTTTAGGCtatttcttcctcctcctccttcttcttctttctccccCAAGCATTTCCACCTCTTCATCTCTTCGCTCCTACTCGAAATGTGTACATGGTGGGAGTGGAGGCGGTGCAGAGAAGCTTGGTCAGGTCAGGTTGCTTTGTTGGTGCTGGGAGGGGAAGGGGtggaaagagggaggaggaggaggaggaggaggaaggtagGATGCTGGGAGAGTTTTGTTTAACCCGCCGCCTCATCCCCCTCTTTGCGCCCGCGCTGGCCGCCCGCACTGGCTGCCAAAATCCTCTGTACAAAGTCTTTGGTCCGCCCGGCAACTAAAGGA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0046914 transition metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
TU4341 True 1193 lncRNA 0.43 2 9525558 9531976
TU4342 False 522 TUCP 0.56 2 9472100 9527214

Neighbor

gene id symbol gene type direction distance location
LOC120559460 LOC103373852,LOC100691479,LOC101478757,LOC102296632 coding upstream 16585 9450096 ~ 9455515 (+)
LOC120559385 NA coding upstream 76513 9383587 ~ 9395587 (+)
LOC120559260 LOC103370034,LOC108247445,LOC107081964,LOC107382403 coding upstream 105302 9338719 ~ 9366798 (+)
LOC120559502 morn4,LOC104930036,LOC101480080 coding upstream 192166 9250439 ~ 9279934 (+)
slit1b slit1,LOC100705354,LOC102205586,LOC102298907,LOC101480949 coding upstream 358747 9037179 ~ 9113353 (+)
LOC120559363 NA coding downstream 58517 9590493 ~ 9629483 (+)
LOC120559226 NA coding downstream 112412 9644388 ~ 9983645 (+)
LOC120559524 LOC103359075 coding downstream 249958 9781934 ~ 9787552 (+)
LOC120559412 NA coding downstream 270862 9802838 ~ 9817650 (+)
LOC120565722 NA coding downstream 555166 10087142 ~ 10090156 (+)
G3072 NA non-coding upstream 165544 9263304 ~ 9306556 (+)
G3057 LOC103370035 non-coding upstream 290914 9180723 ~ 9181186 (+)
G3045 NA non-coding upstream 308189 9161187 ~ 9163911 (+)
G3044 NA non-coding upstream 316285 9152879 ~ 9155815 (+)
G3043 NA non-coding upstream 335693 9136191 ~ 9136407 (+)
G3107 NA non-coding downstream 42940 9574916 ~ 9620858 (+)
LOC120559601 NA non-coding downstream 106082 9638058 ~ 9639141 (+)
LOC120559541 NA non-coding downstream 108101 9640077 ~ 9643954 (+)
LOC120559553 NA non-coding downstream 148041 9680017 ~ 9683099 (+)
G3163 NA non-coding downstream 308812 9840788 ~ 9842085 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 560192 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 769645 8670171 ~ 8702455 (+)
socs7 socs7 other upstream 828398 8617383 ~ 8643702 (+)
LOC120565323 NA other upstream 1057024 8401715 ~ 8415076 (+)
G2590 NA other upstream 1380595 8089813 ~ 8091505 (+)
G3148 NA other downstream 239599 9771575 ~ 9772935 (+)
G3117 NA other downstream 393695 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other downstream 566713 10098689 ~ 10132142 (+)
LOC120565738 NA other downstream 576118 10108094 ~ 10116499 (+)
LOC120559251 NA other downstream 591123 10123099 ~ 10167614 (+)

Expression


Co-expression Network