G3045


Basic Information

Item Value
gene id G3045
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9161187 ~ 9163911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4273
GTCTTCTTGAATATGCAGTTAAAAGAAAAAGGTGTCCGTTTCTCAGACAGAGATTTAAGCGTAGTCCTGGACTGTTTGCTGAAAGACAACTTCTGTCAAAGTCTCTGGAGATGTTCGTTGCGGTCTTGCatctattttgtagcttgtttgTGTCTTAAGATTGAGAATTAATTTTGTTAAGCCACAGCAACCTCGATGGACCAGCATGCAATGCAGCCACAATACACTTTCTTATCTTAACTGGGAAATCTTTGTGTCTTGTTTTTAAATCACAGGCAAATGTGGGATTTCAATCTTCAAACTCAAAGCATTTTACCTTTCTGAATATGAATTAAACAACATACCGTGAAAAAGGACATGGCAAAAACTAATTTTTTCAAGATTTTTACATTTCTAAATTCAAATTcttgcattgtttaaaacagTATAATTAAAGTCAAATGTGCTTCTCAGCAGACGGATAAAACACCGCAGGGGTCTTTGTTTTTCGCTCCTTTGGTGGCAGCTCGTACACACAGAGGCCTGTAACGGCATGTGTCACTCCCAACAGCGGCAGAAATAGATGAGGCAGGAAGGAAAAGATAAGAGGAGAAACTTAAACCGCAACAAAAGAACTGCATCTGAATCAAAGACTGGTCACATAGAGAATGGAGGAAAGAAAGATTGGTAGGttgatttaaatacaaaaagaggaagaaaagtgGTTTTCACAGAGGCAGTGCCTGCAGACTCCCAGATCAAAATGAGCCAGCAGGGCTGATGTTCTGCAGGCTGTGAACAAAACACACCCACCTGCTTCTAAATGAGAAACGGCAGCCTCCCTGCTTCATAATTATACATGTAACCCGCCCACACAAAGTGTGGCTACCTGATGAGGAGGGagagtgtgcgtgcgtgtgtatgtgtgtgtgtgtgtgtgtctctacgtGCTCTTCCACGGATGTATGTGCTAGAGAGAATACAGCGTTGTATTCACAGAAACCTGGCTTCTGGCTTTTAAAGAATGTGTCTTTTCTCGTTTTAGAAGAAAACGGAGAGAGGAAACGAAGATGCCATCAGAATAACAACAGTATACGAACGATGACAAGAAACGACAATTATTCCAAAACTGCTTCCGTCAGTTACATCTAAAAATCTGGAAACGAGCCGTACTAAAAATCCTGATTCttctttgtgtgcgtgcgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtttctaatgTACAATCAGCTGCTTTGAAGTGGTCGGACCTGAGGTATAAATGACAACCAGATGTGCAGCGGGACATTAACAGAAACAGAAGAAACCTCTCGGCAGAGAGGAGCATGGCAATCGTATACATTGTGGGTCTTTCTTTGCTGGTAGCACGCAGCATCGCATGCCATCCTGAAACCAAATGGCACGCCATGTGGCGTCTACTAAGTGAGGTTACAGTAGTTGCTGTTTgacatgttttttcttttcttctttttttatcacGTTATTGACATTGTCTTTCACtcagaagaaagaaaatcatcaaatcaaataaaaaataaaaaacaaaacctgaAAAGCAAAAGAGAAATCGATTGGCTTACCTGAAGATGCAAAAACAgtcaaataaatacacatatattCATAAGTATATAGTTTTTCCTCATTTTCATTATATAAAGGTAcattttcctgtgtgtgtggtttttttttttggaatgcaGTGTAAAAGATTTTGGATGTATTGATCTTTTACAAGACAGCAGATAAAGGAAGGTTAACTTGCCCACCTGTCCCCCACCCCCAATCTCCCCTCTGGGTCTCTGATTTCACCGGttgtgagaaataaaaaaaattaaaaaaaattaaaaagaaaagaaaatccccCTGTCATGTTTCAACCTGGAGTTATGTTACacctaaaataaaaactaaaaaaaacacaataaagcataaaagaaaagaaaaaataaacccTCAGTTAACAAAAAGACCTGGTTCTTTCTCAGACCAGGGTGGGACCGACTGCCTCGCCTCCAGGGTGAAACCAGATGACCGAATCCCAAAATGTTTTGACTTTTAGGAGGAAGAAATGAGAGGTTCGCAGCCCTCCCATACCAACCCCATCCAGTGCTCAGAACAGGAATAGCTGTAAAGCCCCTGtgggtcttcttttttttcttctctctctcaatctGTTGCTCATTATATACTTCTATAAGGTTTTGTTGTtgcgaaaagaaaaaaaatacctgAAAAGAGGTAGGGTGGCAAATATTGGTCAGTCAGACACTTGAAGcgtctccctcctccctttgcAAGAAGGAGgcgaaacaaagaaaagaaaaacgaacagatgagaaaagaaaaaaagagcggAGGATACTACATTTCCCAGAGTATCAGCTATCCCTTCGCCAGGCTCCCGGGTAAGGTATACGTAAAAGTACGAGGCACAGAAAGGAGTCATTATTCTGAGATTGAGGTATAGCACTTTGTCTCTGCTCTATCGTTTTTTGAAGTTTATACGTGTATAAATTACATCTTGTACAGGTAGTTAAGTCTGCGCCATTTTCCGACTGACAAATATTGCTGCCCATCCCCCACTGGCTCGATCCTGAGACATTTACAGTACTGAAGGCTACTGTCGCACGCCCGCGTCAGAAAACGACTGCGTTTCCAATTGCAAGCAGCGTGAAGTGAAACTAAAagcaaaagaataaaaacaacagtctggtaaaaagaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4273 True 2725 lncRNA 0.40 1 9161187 9163911

Neighbor

gene id symbol gene type direction distance location
slit1b slit1,LOC100705354,LOC102205586,LOC102298907,LOC101480949 coding upstream 47834 9037179 ~ 9113353 (+)
arhgap19 NA coding upstream 134042 9017973 ~ 9027145 (+)
LOC120568168 LOC104932785,LOC100704818,LOC105931195,LOC103154494,LOC106906982 coding upstream 223959 8932065 ~ 8937228 (+)
LOC120555608 LOC101482510,LOC101157032 coding upstream 271632 8865659 ~ 8889555 (+)
lgsn lgsn coding upstream 362260 8793045 ~ 8798927 (+)
LOC120559502 morn4,LOC104930036,LOC101480080 coding downstream 86528 9250439 ~ 9279934 (+)
LOC120559260 LOC103370034,LOC108247445,LOC107081964,LOC107382403 coding downstream 174808 9338719 ~ 9366798 (+)
LOC120559385 NA coding downstream 219676 9383587 ~ 9395587 (+)
LOC120559460 LOC103373852,LOC100691479,LOC101478757,LOC102296632 coding downstream 286185 9450096 ~ 9455515 (+)
LOC120559363 NA coding downstream 426582 9590493 ~ 9629483 (+)
G3044 NA non-coding upstream 5372 9152879 ~ 9155815 (+)
G3043 NA non-coding upstream 24780 9136191 ~ 9136407 (+)
G3041 NA non-coding upstream 34488 9126183 ~ 9126699 (+)
G3031 NA non-coding upstream 130561 9028783 ~ 9030626 (+)
G2986 NA non-coding upstream 219065 8941879 ~ 8942122 (+)
G3057 LOC103370035 non-coding downstream 16812 9180723 ~ 9181186 (+)
G3072 NA non-coding downstream 99393 9263304 ~ 9306556 (+)
G3085 NA non-coding downstream 243730 9407641 ~ 9496782 (+)
G3069 NA non-coding downstream 303706 9467617 ~ 9516145 (+)
G3090 NA non-coding downstream 338515 9502426 ~ 9525440 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 249279 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 458732 8670171 ~ 8702455 (+)
socs7 socs7 other upstream 517485 8617383 ~ 8643702 (+)
LOC120565323 NA other upstream 746111 8401715 ~ 8415076 (+)
G2590 NA other upstream 1069682 8089813 ~ 8091505 (+)
G3091 NA other downstream 308189 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other downstream 328352 9492263 ~ 9512693 (+)
G3148 NA other downstream 607664 9771575 ~ 9772935 (+)
G3117 NA other downstream 761760 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other downstream 934778 10098689 ~ 10132142 (+)

Expression


Co-expression Network