LOC120559260 (LOC103370034,LOC108247445,LOC107081964,LOC107382403)


Basic Information

Item Value
gene id LOC120559260
gene name LOC103370034,LOC108247445,LOC107081964,LOC107382403
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9338719 ~ 9366798 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800864.1
CATCATTATCACCGCGGTTATTGAGCTGCTCCAcggtccctccctccctctcccgcATGGACCGGAACCACGCAGTGCCACGTGACCGCGGAGCTCTGGACTGAACGAGCCTCTCTCACACCCGCATCATGGCTGCGGAGGATGCGGCCGCGCGGTCCCGAACCGGAGCCCTGCTCCCCCGCGGGGCTCCGCTCTCTCCTCcccgcctgctgctgctgctctccctggcCGCGGGCTCCCTGCTCCCCGCCCCGGCGCTCGGCTTGCTCGGCTTTCGGCCGGAGGAGACCGGAGCGGAGCTGTCCGTGGCGGACGGGGTGCTGAAAGCCACCGAGGGGACCCGCTTCATGCTGCGGGTTTATTACTCCACCTCCCCGCAGAGGCTGAACCGCACCGCGGCGACTCGCGCCAACAACGCCGCGCCCTGGGTCGCCTTCATCGAGGAGCCGAGTCCCGGGCGAGAGGGACAAGCTCACCCGAAGCGGAACATGTGCATGGACAAGAACGCCAGGACGTCCGACATCGAGGTTTTGGGCTCTTTCAAGTCCGCTTCCAGTCAAAACTCGGTGCTGGTGGAGCTGCTGGCCAAAGACCTGCGGAGGGGGGAGAAGATGAAATACTACTCCATGTGCGCCTTTGACGGATCCAAATGGGAACACTACCGGACGCGGGATTTCTGGGTGGCCGTGGTGGAGCGCTCGGCTGTCCCGGAGCTCTGGCTGCAGGTGCTGGTGTCCGTGCTGCTGCTCGGGCTCTCGGCGCTGTTCAGCGGGCTGAACCTGAGCCTGCTGGCGCTGGACCCGGTGGAGCTGCAGGTCCTCCAGAACAGCGGCACCGACAAGGAGCAGAACTACGCGCGGAAAATCGAGTCGGTGCGTCGGCACGGCAACTACGTGCTCTGCACTCTGCTGCTGGGCACCGCGATCATCAACGCCTCGCTCGCCGTGTGGATGTGCCAGATCCTGGGCATGACCTGGCTCTCCACGGTCATCTGCGCCTTCGGCATCTTCTTCGTCGGGGAGATTCTCCCGCACTCGGTGGCGTCGCGCCACGGCCTCGCCATCGCCTCCAAAACCATCTGGGTGACGCGGCTGCTCATGGTGATCTCCTTCCCCATCTCCTACCCCATCAGCAAACTGCTGGACCTCATCCTCAACCAGGAGATCTCGAACTTCTACACCAGGGAGAAGCTCCTGGAGATGCTGCGCGTGTCCGACCCGTACCACGACCTGGTGAAAGAGGAGCTCAACATCATCCAGGGAGCGCTGGAGCTGCGGACCAAGACCGTGGAGGACGTGCTGACGCCGCTGAGCGACTGCTTCATGCTGGCCTCGGACGTGGTGCTGGACTTCAACACCATGTCGGACATGATGCAGAGCGGATACACGAGGATACCGGTGTTCGAGAACGAGCGCTCCAACATCGTGGACATCCTGTTCGTCAAGGACCTGGCGTTCGTGGACCCGGACGACTGCACCCCGCTGAAGACCATCACCCAGTTCTACAAACACCCGCTGCACTTCGTGTTCAACGACACCAAACTGGACGCCATGCTGGAAGAGTTCAAGAAAGGGAAGTCCCACCTGGCCATCGTGCAGCGGGTGAACAACGAGGGAGAGGGCGACCCTTTCTATGAGGTGATGGGCATCGTCACCCTGGAGGACGTCATCGAGGAAATCATCAAGTCAGAGATCCTCGACGAGACGGACCTCTACACTGACAATCGTACGAAGCGCCGTGTTTCTCACCACGAGCGGAAGCAGCAGGACTTCTCCATCTTCAAACTGTCGGAGAACGAGATGAAAGTGAACATCTCTCCTCAGCTTCTCCTGGCAACACACCGCTTCCTGTCCACAGAGGTGGAGCCCTTCAAACCCGCTCACATCTCAGAGAAGATCTTGCTGAGGCTGATCAAACACCCCAGCGTGGTTCAGGAACTCAGCTTCGACGAGAAGAACAAGCGAGCGTCGCAGCACTTCCTGTTCCAGCGCAACAAACCCGTGGACTACTTTGTCCTGGTCCTGCAGGGTCGAGTTGAGGTGGAGTTTGGTAAGGAGGCGCTGAAGTTTGAGAATGGAGCGTTTTCCTACTTTGGGGTTCCTTCCATCATGCCAGCAGTCCACAGATCCCCCTCTCGCAGCAGTGGTTTGGACCGCTCTGAGTCCATGCTGTACGGAGGCAGCATGAGCCAACTAAACGGTGGGGGGAACGTCTACCTGCCAGACTACTCTGTCAGACAGCTCACACATCTGCAGATCATCAAGATCACCCGGAGCCACTACCAGAACGCTGTGACAGCCACCCGGATGGACAGCTCTCCTCTGACGCCGGATGCAGACGGCCGTCTGGCAGAAGGCAACGGCCCAACCCCAGAGGCCCCGGCCGCGGAGCACGGCGCCACGCTGATGCCCCCGgggcacagcagcagcagcagcaccaccaccaccactctcATGCCCCCACCCAGGGAGCACGGCCGGCCCAGCTCCGCCCGAACCCGAGGACAGCAGTCCAGCGTCCCGCACAGCACCTCGCTGCTGAACGAGAAGAACCGCATCGTCCGCAGCAAGTCTGACGGCCAGAAGAGCCCCAGCGACTCAGTGTTTCTCAGGATGGATGAGATCCCTTACATCAGGGAGGACAGATCTGAGGCCGACGCGCACACTGACATGGCCTCTGTTCCCATAGAAACGGACACGTCCCCTTTCATCAGCAGCCTGTCCCTCAGCGGCTCAGAGGACACACTGGGCAAGAAACTCCTGCTCAAACTCAGCcacaagaagaggaaaaaatcCCGCGAAGGAGAAAGAACACCAGAGGACATTTCAGAACAGCCGCTGGTGAAAACCTAgcagcgtgcgtgtgtgcgtgaatgtgtgcgcgcgcgtgcgtgtgacGGACCCGGACATTCAATCATCTGATGGTTCTTTAAGTTGTTTGTGAAGACGATGTGGTTGGTGAACTACAGCTATCAGAGTTTTATCTGAAAACAacacaccccctccccccctcccactGTGGGAGTTTATAAAGTGGACCCATCCACAGATATGTACTGAACTCATGGATGGAAGACATcagtttataaaaataaaaaaaacggggGGGTCGCAGCTTTGCAATATGCATTATACTGGAACTTCACAGGTTTTTTCATGCTGATGCTTGTAAAGGAATGACTGTGAATGTTAAAGGTTTGTAGAAAATAATAgttttatactatatatagtatatatatgatCACTTCTCCAATGGAGCTGAGGGGAATAACAGTACACAGGAATCGGATGGAAGACACCAAAGACGTTGCTGTTTTTATACTGCCCCGAATTGCATGGGGACATCTCAACAGAACAGAAGTAAACTGGCCGCTTTGTGCTCAGGCTTTTGGTTTGAAAGGTCTCTTGATTAATGTTGCTTGTTTACCTGCTAATGAGATCTATAGTCTAACATGAACCGACAACAAATATTATTCTTTTCGTCTTCTATTTATGTACGGACAAGCATTTTATATCCAGATTGTGTCCgtttttaaaacatttcccTCCCTTTTTCCAAAATGCAGATTGGCACACACGTCTAATAAGATCTTTACAAACCAggggcatttttttttcttcttttttcttgcgATCAATTTGCacatcaatatattttttttcccactgttttttgttgttgtcatgaGTTCTTTCACAAAGATCGCAAATATGACGCAGTGACAAAGCGACACCTAATCTTTTTTTCCAAACAATGTTGATTTTTCTGAGCTCCTGTtgcataaaacaacaacaacatgggTTCACATAGCCTGAACACAGAGCCACCCGAGGCGACAAACTTTTACTGCTTTCAACCTTGACTAAGGCAGCGCATATCATATCCACTTCTTTTAattacctttcacaataaaagtcctcgATGGCGTAACTGCTTACCTGTCGGCAGGGTCCACAGTTAGCACCAGCCACCAGCCAAACGCTGATAatatatgcaagtggctggtagatttgcgtcactcaccagccaaaaaaaacaatggtaatttATTGAGTGTCTGGTCAAATTTTAACATtaactagccatttggctggtggaaatttgtttttattttgtacccTGCCTGCCGGTAGCCTATAAATATTCCGAAGTGAGGATTTCGCATTTTCGTGTTGTTTATTCATAACGCTCCCAGTGTGTAAAGGCCTTAAGCAAGTACATAAtgtggccaaaagtatgtggacgcCTCTGTTTTTCTGGTTTGGGCCGCCTACTTACAATGAACGGAAGTCTTAATGCAACAGCATACAATGAATTTTAGACATAAATGTAACTTTGCATCAGTAGTTTTTGTATGTTAGTGTCAGGTGGTAAAAACACAAATGGTTGAAACGCCCGCTCTGCATCATCGCAGCTGTATGTTCAAACAGCAGGCTGACTCTGAAGTAGCTGATTGATTGTGCACCTTGTTATCTGACAATAGTCAGATTGGATTTGTATGGTTGTTCAATTGTTATGTTGCTTATTCTGCTTCGTGGTGAAACTCATCGCTATAACGCCTCCGCTTATCCAGAAATGACCCTcatccttttttgttttgagcTCTTCTTTTTCATTATCTGAGCCGAAAGTTTCATTTTGAAGATATGTGACGCAAATCGCATTTTTAtagctcataaaaaaaaaagtcttcttcTGAACCTTAGAGCGCTATTAGACTGTGGCTCAGACATGGATAGAAGACAGATTGGAGCCGCCTGTCTgcatatagatttttttttttaaatgtctttcatTTCAGTTCAGTTGTATTCATGACACGATGTGTGACCACTGAACCTCTTTAAATATTCTGCTCGTGCTGAGCCCTTTTCATTAGATCCATTTCAATTATAAATGAATCTCGTTTTCTCTAGCATTTCTTTATTGGAGGGGGAAATGAAAGTGTCTGCAAAGTGGCTGAAACTACTGTTGTTCCCCACAACATATGATGGTTGTATCCCCTTGTGTCATATAGGATGCCAAGATTACATCTGTTATTGGGTTTAGAAGATTATCTACACTGGAAACACATACCTCCAATAAGGCTCTGTTGCAGACTCGGATGTACAGTACGTCTTCACTCATCGGCGTCTCCAATCATttctcaaccaatcagcattaATGTAAATATTAATAACTAGCTTGACACAACTTGACTTTTCATCTTCACTTTAAATGTCACTGGACTGA
>XM_039800873.1
CATCATTATCACCGCGGTTATTGAGCTGCTCCAcggtccctccctccctctcccgcATGGACCGGAACCACGCAGTGCCACGTGACCGCGGAGCTCTGGACTGAACGAGCCTCTCTCACACCCGCATCATGGCTGCGGAGGATGCGGCCGCGCGGTCCCGAACCGGAGCCCTGCTCCCCCGCGGGGCTCCGCTCTCTCCTCcccgcctgctgctgctgctctccctggcCGCGGGCTCCCTGCTCCCCGCCCCGGCGCTCGGCTTGCTCGGCTTTCGGCCGGAGGAGACCGGAGCGGAGCTGTCCGTGGCGGACGGGGTGCTGAAAGCCACCGAGGGGACCCGCTTCATGCTGCGGGTTTATTACTCCACCTCCCCGCAGAGGCTGAACCGCACCGCGGCGACTCGCGCCAACAACGCCGCGCCCTGGGTCGCCTTCATCGAGGAGCCGAGTCCCGGGCGAGAGGGACAAGCTCACCCGAAGCGGAACATGTGCATGGACAAGAACGCCAGGACGTCCGACATCGAGGTTTTGGGCTCTTTCAAGTCCGCTTCCAGTCAAAACTCGGTGCTGGTGGAGCTGCTGGCCAAAGACCTGCGGAGGGGGGAGAAGATGAAATACTACTCCATGTGCGCCTTTGACGGATCCAAATGGGAACACTACCGGACGCGGGATTTCTGGGTGGCCGTGGTGGAGCGCTCGGCTGTCCCGGAGCTCTGGCTGCAGGTGCTGGTGTCCGTGCTGCTGCTCGGGCTCTCGGCGCTGTTCAGCGGGCTGAACCTGAGCCTGCTGGCGCTGGACCCGGTGGAGCTGCAGGTCCTCCAGAACAGCGGCACCGACAAGGAGCAGAACTACGCGCGGAAAATCGAGTCGGTGCGTCGGCACGGCAACTACGTGCTCTGCACTCTGCTGCTGGGCACCGCGATCATCAACGCCTCGCTCGCCGTGTGGATGTGCCAGATCCTGGGCATGACCTGGCTCTCCACGGTCATCTGCGCCTTCGGCATCTTCTTCGTCGGGGAGATTCTCCCGCACTCGGTGGCGTCGCGCCACGGCCTCGCCATCGCCTCCAAAACCATCTGGGTGACGCGGCTGCTCATGGTGATCTCCTTCCCCATCTCCTACCCCATCAGCAAACTGCTGGACCTCATCCTCAACCAGGAGATCTCGAACTTCTACACCAGGGAGAAGCTCCTGGAGATGCTGCGCGTGTCCGACCCGTACCACGACCTGGTGAAAGAGGAGCTCAACATCATCCAGGGAGCGCTGGAGCTGCGGACCAAGACCGTGGAGGACGTGCTGACGCCGCTGAGCGACTGCTTCATGCTGGCCTCGGACGTGGTGCTGGACTTCAACACCATGTCGGACATGATGCAGAGCGGATACACGAGGATACCGGTGTTCGAGAACGAGCGCTCCAACATCGTGGACATCCTGTTCGTCAAGGACCTGGCGTTCGTGGACCCGGACGACTGCACCCCGCTGAAGACCATCACCCAGTTCTACAAACACCCGCTGCACTTCGTGTTCAACGACACCAAACTGGACGCCATGCTGGAAGAGTTCAAGAAAGGGAAGTCCCACCTGGCCATCGTGCAGCGGGTGAACAACGAGGGAGAGGGCGACCCTTTCTATGAGGTGATGGGCATCGTCACCCTGGAGGACGTCATCGAGGAAATCATCAAGTCAGAGATCCTCGACGAGACGGACCTCTACACTGACAATCGTACGAAGCGCCGTGTTTCTCACCACGAGCGGAAGCAGCAGGACTTCTCCATCTTCAAACTGTCGGAGAACGAGATGAAAGTGAACATCTCTCCTCAGCTTCTCCTGGCAACACACCGCTTCCTGTCCACAGAGGTGGAGCCCTTCAAACCCGCTCACATCTCAGAGAAGATCTTGCTGAGGCTGATCAAACACCCCAGCGTGGTTCAGGAACTCAGCTTCGACGAGAAGAACAAGCGAGCGTCGCAGCACTTCCTGTTCCAGCGCAACAAACCCGTGGACTACTTTGTCCTGGTCCTGCAGGGTCGAGTTGAGGTGGAGTTTGGTAAGGAGGCGCTGAAGTTTGAGAATGGAGCGTTTTCCTACTTTGGGGTTCCTTCCATCATGCCAGCAGTCCACAGATCCCCCTCTCGCAGCAGTGGTTTGGACCGCTCTGAGTCCATGCTGTACGGAGGCAGCATGAGCCAACTAAACGGTGGGGGGAACGTCTACCTGCCAGACTACTCTGTCAGACAGCTCACACATCTGCAGATCATCAAGATCACCCGGAGCCACTACCAGAACGCTGTGACAGCCACCCGGATGGACAGCTCTCCTCTGACGCCGGATGCAGACGGCCGTCTGGCAGAAGGCAACGGCCCAACCCCAGAGGCCCCGGCCGCGGAGCACGGCGCCACGCTGATGCCCCCGgggcacagcagcagcagcagcaccaccaccaccactctcATGCCCCCACCCAGGGAGCACGGCCGGCCCAGCTCCGCCCGAACCCGAGGACAGCAGTCCAGCGTCCCGCACAGCACCTCGCTGCTGAACGAGAAGAACCGCATCGTCCGCAGCAAGTCTGACGGCCAGAAGAGCCCCAGCGACTCAGTGTTTCTCAGGATGGATGAGATCCCTTACATCAGGGAGGACAGATCTGAGGCCGACGCGCACACTGACATGGCCTCTGTTCCCATAGAAACGGACACGTCCCCTTTCATCAGCAGCCTGTCCCTCAGCGGCTCAGAGGACACACTGGGCAAGAAACTCCTGCTCAAACTCAGCcacaagaagaggaaaaaatcCCGCGAAGGAGAAAGAACACCAGAGGACATTTCAGAACAGCCGCTGGTGAAAACCTAgcagcGATGCCAAGATTACATCTGTTATTGGGTTTAGAAGATTATCTACACTGGAAACACATACCTCCAATAAGGCTCTGTTGCAGACTCGGATGTACAGTACGTCTTCACTCATCGGCGTCTCCAATCATttctcaaccaatcagcattaATGTAAATATTAATAACTAGCTTGACACAACTTGACTTTTCATCTTCACTTTAAATGTCACTGGACTGA

Function

NR:

description
PREDICTED: metal transporter CNNM1-like

GO:

id name namespace
GO:0030554 adenyl nucleotide binding molecular_function

KEGG:

id description
K16302 CNNM; metal transporter CNNM

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800864.1 True 5232 mRNA 0.51 10 9338719 9366798
XM_039800873.1 False 3071 mRNA 0.60 11 9338719 9366798

Neighbor

gene id symbol gene type direction distance location
LOC120559502 morn4,LOC104930036,LOC101480080 coding upstream 58785 9250439 ~ 9279934 (+)
slit1b slit1,LOC100705354,LOC102205586,LOC102298907,LOC101480949 coding upstream 225366 9037179 ~ 9113353 (+)
arhgap19 NA coding upstream 311574 9017973 ~ 9027145 (+)
LOC120568168 LOC104932785,LOC100704818,LOC105931195,LOC103154494,LOC106906982 coding upstream 401491 8932065 ~ 8937228 (+)
LOC120555608 LOC101482510,LOC101157032 coding upstream 449164 8865659 ~ 8889555 (+)
LOC120559385 NA coding downstream 16789 9383587 ~ 9395587 (+)
LOC120559460 LOC103373852,LOC100691479,LOC101478757,LOC102296632 coding downstream 83298 9450096 ~ 9455515 (+)
LOC120559363 NA coding downstream 223695 9590493 ~ 9629483 (+)
LOC120559226 NA coding downstream 277590 9644388 ~ 9983645 (+)
LOC120559524 LOC103359075 coding downstream 415136 9781934 ~ 9787552 (+)
G3072 NA non-coding upstream 32163 9263304 ~ 9306556 (+)
G3057 LOC103370035 non-coding upstream 157533 9180723 ~ 9181186 (+)
G3045 NA non-coding upstream 174808 9161187 ~ 9163911 (+)
G3044 NA non-coding upstream 182904 9152879 ~ 9155815 (+)
G3043 NA non-coding upstream 202312 9136191 ~ 9136407 (+)
G3085 NA non-coding downstream 40843 9407641 ~ 9496782 (+)
G3069 NA non-coding downstream 100819 9467617 ~ 9516145 (+)
G3090 NA non-coding downstream 135628 9502426 ~ 9525440 (+)
G3089 NA non-coding downstream 151473 9518271 ~ 9605820 (+)
G3107 NA non-coding downstream 208118 9574916 ~ 9620858 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 426811 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 636264 8670171 ~ 8702455 (+)
socs7 socs7 other upstream 695017 8617383 ~ 8643702 (+)
LOC120565323 NA other upstream 923643 8401715 ~ 8415076 (+)
G2590 NA other upstream 1247214 8089813 ~ 8091505 (+)
G3091 NA other downstream 105302 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other downstream 125465 9492263 ~ 9512693 (+)
G3148 NA other downstream 404777 9771575 ~ 9772935 (+)
G3117 NA other downstream 558873 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other downstream 731891 10098689 ~ 10132142 (+)

Expression


Co-expression Network