G3107


Basic Information

Item Value
gene id G3107
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9574916 ~ 9620858 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4358
TATTTTTTATTGGGTGTTTCACATACAATTCCACTCACATTTACTTCACACCAATACAAGGTTGCATATAGGAATTTTGTAACCATGGTGActttgaccacacacacacacacacacacaaattatagGACTATCTCCATCTATGTTGCCAGGAATATTTAACAGATACGCAGCAGCCAGTTACCAAAAGAACTGAACAGAtttgtgagaaaaagaaaatcattttcCGGGTCAGTTCGCACGTCACCAGCGTGTTGTGGAGTGTTCACTACTTTAGTTCGGTGTGTTTGGCCGGGCGAGAACATTGCCATTTGTTGTCCAATGATTCACTGACACTGAGAATGTGACTCTGTCCTTTTGCCAGCTAACTGCAGCACGTTGCGTTATGAGTGGGATTGGGAATGTAATCCAAACCAACGACGGAAACAAACCCAAAGCACAAGGGTTTATGGGTACATCTGATAGCACGCAGTTCGTAGTTGGAAAGCTCGACAGAAGAAAATAGGAGTGAGAGCAAAACCACAGTCTTGACTGATGCTCATATTCAGCTTTTTCTATATGTGCTCTCGACTGGTATGAGCACCAGAGACCTAAACGCAACACTGAGCTTCAGTTACAGGTAGGGCTGACTAAGCCCAAATCGACCCATTATCGgtcattttggtcttagtcgactataATTTCTTTAGTCAGTTAGTCGtgctgaatgatttatttccaagaaacctaTGAGCACAGTTCTGGTAAACAacatttaaagtggtgcttttgtggagaaactcagttttgcAGATGGTACGTGCCATGGACTGCAATTATGTTGCATTATATgaactaagaatttctttagccCTAGTTACAGGACAGATTTGTGTAGACTCCCCGACAGCACCAACCATCTCTAACATAGCCGGTTGATATTTTACCAAACCTTTCGCCAACAGCTGAGCTACTTATGAGTCCACAAGCTGTAGTTCGCTTGAAATGGCAAACTAAATACTATCATTCTGGCAAGGAAAGCCTCACTCTCTTGGTGTGATCACACTCTATTTGACGTGGGTCCCTGCttgtgtaactgtaactgtacgTTACGCTGCTGTACAGCCACTTTGAGGTGCATGCCACCACCGCAACTATCAAAGAGGGCTGGAGGAAAAGATACAAAGCAATTTGGTCTTTCTAAAAAGTAGCTGTATATTGATTTTGATTCTTTTTGGCTGAAGCAAAGTGGTTTTAGAGAAGAGGACAAAGAGGGACAGTGTTAAGGAAGGATGGGGGAGGGGGAGTGGGAAGGGACTCAGGGTTGGAGATGGGGAGTGTAAGGGAGAGACGTAGTTGTGGTAGTGGCTTGCAGCTGAGACTCTTAAAAGCAACCAGGAGGAGGCAGATGTGTCACACCAGCATCTTATTCAAAGTGAATGATAAATAGGCAACCTTGTTGCTGGAAGAGGGAACATAATATATATTGTTAAACAGATGTACCCAAGAACAACACACTTTGGCGGCGTTGGCAACTTGCCGTCCAACACCATCATGACCTTAACTTAATTTCTTACAAACTGTTTTGGATGTTTAGACTGCTATGAAGCATGCCGCTGTACTGTTTCTCTGCCCGTTAGTCTCGCGTTGTCAGCTCtatctccgcagcgctgtggcgcaaggtctggctacaccacacatatattctttaaaccaatcacaatcgtcttgggcggtgctaagctctagacgcagcgacggtggttctgcaaaatagtctcaggaaggaatgtgttttggtggaacatttgcaccccgcaaaagacaACGCTACATGAAATATTGAATTAAGTTAATTGTTCAcgcaatacagtaacgtgagctatttaaatgagctgatacatggttaaacttCATTTGCTCTTACTGGcatatcgccgtgtgtacttggtccacagcaatcccaccaatcggtcccaaaatgtccgacttagagaggaaatgctgtgAACATGTTCAGGTAAAAAGGagagttctctgcgcttctgcagaccacagCAATCCGGAgcaaccaaggcaggacacaacagtataaaataacaaaaaaattgccgttgcaacacagatgtcttcttactatcggcaattttttttgttatttcatgctgtaaacatgttctttgtaaatctttacaatcgttccccgaaagaaccaagcaggcctgccttgctGCGCGATCCaacttttctttaaaaagtGCCATgatcagcgtgtagcttgcaagctcgaagtttgttgttgttttatgaaGAGAACGCATTTTGTTTCAGAACTGCAACCCACAGGAGGTGAACATCCTGGAAATATAAATCCAGACTATCTTCCCATCAACTGATCTGAGCTAGCTGGCCACGTTGCTGCAGAGAGGATGGTACGTCAACGCTTTAGGCAAGAAAttcacatatacttggaggtttatgcctcgacgcagaggtccagggttcaaatctaaCCTGTGaccatttcctgcatgtcttcccccctcctctccgctgtcctgtcaaataaaggcggaaaaagcccaaaaaataatctttaaagaaataacCTTGACCTCTGGCGATGCACACAAACTTCCAAAGCTCCACTCACATGCATGTGTACGGATTAACGTGCACTCTCCTGCATACAGGGCAGCACAGTTAGTACAGTACAGTCAGCACATGCTGTAAATGTAGTTCCAATGATAAGTCTTGCTCTTATGAACACAGGATTTGAAGCCAACATTTGGGTTTTTGGTTTCCCAGACTGGACTTTTACGGTAAATTAgattaatatgtttttttttttggaaaaaccCAGCATGTCTTACTTTCTATCCGCAGAAAACAATTAATTATTTAGCCCAATCGACATCAAACTACAAACTACAGATTGACCGCGCTTTGATCTGATATACTGGGACATTGTTGGCCTTTGATTAAATATCCAACGTCAGCCAGGCAGAGGCATCCACCACTGATATAAACGGGGGTTTCCAACAGATTACAGCTACTGAAAATCTCTTGAAAACAAGCAGTGAATGAAcactttgttttgttaaatGCACTTTTCTTTCCCATTGCTTTGTTTTCTACTATGTGAATCCATTAAAAAGCGGCTCTTTTCTCTGCTACTCTGCTACTGAAAAGCTTTAGCTTTTTAGTTCAAATGATGCATTTGCTGTACAGGCTGATTATAAGGGAAAAGTACTTGAACAATGAAAGATGGTGGATATTATGGCCAAATCTATCAGCAGCTTCCAGCAGCTTCAATCCAAAGAAACATGTCCCTACAGTACAGCCTACAGTACATCTGTACACAAGCTGGCATGAATGGGCAGGATTTCatcaaaaaaaaagggggtctAGTGGAAAGGGACAGAATTGGGCGATGAGATCACCATGGCAACGAGAACCTCCGCGGTGAAGAGCATGGGGGAGTTGGGGAGTTTCATGCTGAAGTGGTCTAAAGTGGAGGGAATCGCTCTTCAATTTCATGGTTTTGGGAGATTCTCATGGCCGCGGCCCAAGCACTCACAGTAATgaactcttcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacat
>TU4361
TATTTTTTATTGGGTGTTTCACATACAATTCCACTCACATTTACTTCACACCAATACAAGGTTGCATATAGGAATTTTGTAACCATGGTGActttgaccacacacacacacacacacacaaattatagGACTATCTCCATCTATGTTGCCAGGAATATTTAACAGATACGCAGCAGCCAGTTACCAAAAGAACTGAACAGAtttgtgagaaaaagaaaatcattttcCGGGTCAGTTCGCACGTCACCAGCGTGTTGTGGAGTGTTCACTACTTTAGTTCGGTGTGTTTGGCCGGGCGAGAACATTGCCATTTGTTGTCCAATGATTCACTGACACTGAGAATGTGACTCTGTCCTTTTGCCAGCTAACTGCAGCACGTTGCGTTATGAGTGGGATTGGGAATGTAATCCAAACCAACGACGGAAACAAACCCAAAGCACAAGGGTTTATGGGTACATCTGATAGCACGCAGTTCGTAGTTGGAAAGCTCGACAGAAGAAAATAGGAGTGAGAGCAAAACCACAGTCTTGACTGATGCTCATATTCAGCTTTTTCTATATGTGCTCTCGACTGGTATGAGCACCAGAGACCTAAACGCAACACTGAGCTTCAGTTACAGGTAGGGCTGACTAAGCCCAAATCGACCCATTATCGgtcattttggtcttagtcgactataATTTCTTTAGTCAGTTAGTCGtgctgaatgatttatttccaagaaacctaTGAGCACAGTTCTGGTAAACAacatttaaagtggtgcttttgtggagaaactcagttttgcAGATGGTACGTGCCATGGACTGCAATTATGTTGCATTATATgaactaagaatttctttagccCTAGTTACAGGACAGATTTGTGTAGACTCCCCGACAGCACCAACCATCTCTAACATAGCCGGTTGATATTTTACCAAACCTTTCGCCAACAGCTGAGCTACTTATGAGTCCACAAGCTGTAGTTCGCTTGAAATGGCAAACTAAATACTATCATTCTGGCAAGGAAAGCCTCACTCTCTTGGTGTGATCACACTCTATTTGACGTGGGTCCCTGCttgtgtaactgtaactgtacgTTACGCTGCTGTACAGCCACTTTGAGGTGCATGCCACCACCGCAACTATCAAAGAGGGCTGGAGGAAAAGATACAAAGCAATTTGGTCTTTCTAAAAAGTAGCTGTATATTGATTTTGATTCTTTTTGGCTGAAGCAAAGTGGTTTTAGAGAAGAGGACAAAGAGGGACAGTGTTAAGGAAGGATGGGGGAGGGGggggggggggggggggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4358 True 3638 lncRNA 0.43 2 9574916 9620858
TU4361 False 1301 lncRNA 0.43 2 9574916 9618084

Neighbor

gene id symbol gene type direction distance location
LOC120559460 LOC103373852,LOC100691479,LOC101478757,LOC102296632 coding upstream 119401 9450096 ~ 9455515 (+)
LOC120559385 NA coding upstream 179329 9383587 ~ 9395587 (+)
LOC120559260 LOC103370034,LOC108247445,LOC107081964,LOC107382403 coding upstream 208118 9338719 ~ 9366798 (+)
LOC120559502 morn4,LOC104930036,LOC101480080 coding upstream 294982 9250439 ~ 9279934 (+)
slit1b slit1,LOC100705354,LOC102205586,LOC102298907,LOC101480949 coding upstream 461563 9037179 ~ 9113353 (+)
LOC120559226 NA coding downstream 23530 9644388 ~ 9983645 (+)
LOC120559524 LOC103359075 coding downstream 161076 9781934 ~ 9787552 (+)
LOC120559412 NA coding downstream 181980 9802838 ~ 9817650 (+)
LOC120565722 NA coding downstream 466284 10087142 ~ 10090156 (+)
LOC120559406 NA coding downstream 624335 10245193 ~ 10295893 (+)
G3090 NA non-coding upstream 49476 9502426 ~ 9525440 (+)
G3069 NA non-coding upstream 58771 9467617 ~ 9516145 (+)
G3085 NA non-coding upstream 78134 9407641 ~ 9496782 (+)
G3072 NA non-coding upstream 268360 9263304 ~ 9306556 (+)
G3057 LOC103370035 non-coding upstream 393730 9180723 ~ 9181186 (+)
LOC120559601 NA non-coding downstream 17200 9638058 ~ 9639141 (+)
LOC120559541 NA non-coding downstream 19219 9640077 ~ 9643954 (+)
LOC120559553 NA non-coding downstream 59159 9680017 ~ 9683099 (+)
G3163 NA non-coding downstream 219930 9840788 ~ 9842085 (+)
LOC120559616 NA non-coding downstream 305737 9926595 ~ 9927447 (+)
G3091 NA other upstream 42940 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other upstream 62223 9492263 ~ 9512693 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 663008 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 872461 8670171 ~ 8702455 (+)
socs7 socs7 other upstream 931214 8617383 ~ 8643702 (+)
G3148 NA other downstream 150717 9771575 ~ 9772935 (+)
G3117 NA other downstream 304813 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other downstream 477831 10098689 ~ 10132142 (+)
LOC120565738 NA other downstream 487236 10108094 ~ 10116499 (+)
LOC120559251 NA other downstream 502241 10123099 ~ 10167614 (+)

Expression


Co-expression Network