LOC120559616


Basic Information

Item Value
gene id LOC120559616
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 9926595 ~ 9927447 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639337.1
AGTTAGACTCGTGTCCTGAGTATGAGGACATCTCAGAGACTGCAGCACAGACAGAAGACCCAGAGGAGCAGGAAGACCTGGTGTGAAGTCAAACCAGAGGGAGACTCACATggaggaaaataaaaagaagtcTTTAACTCCAAACGTTTTCATTCTCAGTTATTTAGAAGCAGCAGGTAGCAGAAGATTAGAgaagaatgcagctttatttgtacctGTGCAGGTACATAACATAACTGAACTCAGTTCAGGATTTGACTTAATATGCAAAGTGATATTTTATGTAGTAAAATAATTTTAAGAAATATTGTTCACCCTTTCATATCACACCTGTCCTGGCAGAGAAAGCCAGTAAAGTCCAACTATTCCACAGCATGTACAGTAGATCTTATATGGTatatttttacacattaaaaaacatgaGCTCAGCTCTGTCAAACTTTGCTAGTTGTTCATTTGTATTGAatgaattgtattgtattgcatGTATTGTAGTGTGAACATCATGCCAGTtccctctcactgctgcagagggAGATAGTGTTCAGGTGCAAGCTTTTGATTTCAGCTTTAAACAAACTCTTTTTGGGTTCATTCTTCAGAATGAAGTTTTTATTGATCAGTAATGAgtgcaaattaaatttaaatcagTTGGTATGTTCTGATGTATTTCTCACTTGCCCAATGTTGTCCATCTGTAAAACTTGTCACAGTGTAATAAAGGTTTACTCTGGTGAACAACCTAAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639337.1 True 751 lncRNA 0.37 2 9926595 9927447

Neighbor

gene id symbol gene type direction distance location
LOC120559412 NA coding upstream 108945 9802838 ~ 9817650 (+)
LOC120559524 LOC103359075 coding upstream 139043 9781934 ~ 9787552 (+)
LOC120559363 NA coding upstream 297112 9590493 ~ 9629483 (+)
LOC120559460 LOC103373852,LOC100691479,LOC101478757,LOC102296632 coding upstream 471080 9450096 ~ 9455515 (+)
LOC120559385 NA coding upstream 531008 9383587 ~ 9395587 (+)
LOC120565722 NA coding downstream 159695 10087142 ~ 10090156 (+)
LOC120559406 NA coding downstream 317746 10245193 ~ 10295893 (+)
LOC120559277 NA coding downstream 344064 10271511 ~ 10285014 (+)
LOC120565874 NA coding downstream 375245 10302692 ~ 10305020 (+)
LOC120559619 NA coding downstream 537374 10464821 ~ 10473545 (+)
G3163 NA non-coding upstream 84510 9840788 ~ 9842085 (+)
LOC120559553 NA non-coding upstream 243496 9680017 ~ 9683099 (+)
LOC120559541 NA non-coding upstream 282641 9640077 ~ 9643954 (+)
LOC120559601 NA non-coding upstream 287454 9638058 ~ 9639141 (+)
G3107 NA non-coding upstream 305737 9574916 ~ 9620858 (+)
LOC120559556 NA non-coding downstream 17568 9945015 ~ 9945296 (+)
G3130 NA non-coding downstream 22088 9949535 ~ 9950184 (+)
G3181 NA non-coding downstream 71746 9999193 ~ 10001030 (+)
G3183 NA non-coding downstream 97413 10024860 ~ 10081778 (+)
G3184 NA non-coding downstream 98333 10025780 ~ 10056060 (+)
G3148 NA other upstream 153660 9771575 ~ 9772935 (+)
G3091 NA other upstream 394619 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other upstream 413902 9492263 ~ 9512693 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 1014687 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 1224140 8670171 ~ 8702455 (+)
LOC120559494 LOC103359075 other downstream 171242 10098689 ~ 10132142 (+)
LOC120565738 NA other downstream 180647 10108094 ~ 10116499 (+)
LOC120559251 NA other downstream 195652 10123099 ~ 10167614 (+)
LOC120559474 NA other downstream 327997 10255444 ~ 10262973 (+)
LOC120559244 NA other downstream 393126 10320573 ~ 10459288 (+)

Expression


Co-expression Network