LOC120559619


Basic Information

Item Value
gene id LOC120559619
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10464821 ~ 10473545 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801475.1
TTAAGACAACTCGCTTTCACATTAAGTTTCTAATGTGACTGGCTTGATACATATGTACGTTATTTACCTGCAGGcatgttttattatttctgaACTTACACACAGAGAAATGAGAGGAGCAGCTTGGAGTTTAACTGCAGCAGCGAGTGGATTGGTCGTCCTTCTCCTCACTGTACCAGTGATACAGAGTCAGAATGGCTGGGGAGTGACTTACACCTCTACTCAGATCTGTGCCTTAAAGGGATCAACAGTGGAAATACGCTGCAGCTACAGATACCCATCCACCAATGGTGATGGAGTTAAGGAAGCATTTTGGTTTACAAAAGAGAGTAATAATGTTTATGTGGATCTGAAAATGGACCTGGAGTATTCAGATCGTGTGCAGtttgactgtaaaaaaaaaggtgtgcaGTATCACTCTGAAAACAAGGACTGCACTCTGAGAATCTCAGACCTGAGACAGAGCGACTCAGCTGTGTACAAGTTCAGGTTCAGAACAGACGATTCAACAGGGAAATATACTGGTTTACCTGGAGTCACTCTGTTGGTAGCAGATCCACAGCTCCAGGTACATGTGAGGAGATCAACAGTCAGATCCCACCAACAGCCTACCTGGACAGAACTGACATGTCATAACAAGTGTCAGCTGCCTGATCATTATTCCTACATCTGGTACAAGAACGGCCAGAAATTTGGAGATAAAAAAGTTTACTTTCATCTAGACCTATTTAATCCTGCAGACAACTATTCGTGtgctgtatcaaaatatgagatGTTCCCCTCTCCTTCAGTGTATGTAAAGCTTCCCTCCGTATCAGTGAGTCCTTCTGGTGATTTAATGGAGGGAAGTTCAGTAAATGTGACTtgtagcagtgatgctaacccagcagctaACTACAGCTGGTACAAGAATAATCTAGTTTCCGAACGCCTCAGTGAAGGACCACAGCTCATCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACATGCTGGGGAGGACATCAGCAAACATCTCTATTAATGTCAAATATGGTCCAAAGCGTgcctctgtgtcagtgagtcccCCTGCTGAGATAGTGGATGGCAGTTCAGTGACtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAACCAAACACTGCTTCAAGGACCGGAAAGAAATTACTATTTCACCTCCATCAGCTCTGAGGACAGAGGCAACTACCACTGCAAGTCTGAGAATCAATATGGACTGATTTACTCCTCATCTCTATCTATAGATGTGCAGTATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgaatctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACATCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCGCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGTTTTCCCAGAAACATGGAAATCTGTCATCATTGGAACAATCCCTGCTGTTTTCCTGGTTGTCGTGTGGCTCTCTATCTTCCTACTCATAAGAAAAAAGAGAACCTCCAAGCAATTACCCGAGCCTGGAGATGGATCAGACAACAGGGAACAGGTGAGCAAGGAGAACAATTCAGTTCAGAGGAGCGGGATGAACTTCACTACGCCAGTATCCACTTCTCCACGAACCAGACAGACCCTGTATACTCCAACATCAGACCAGCTGGACTCCGCAAACATGAGgggcaagaagaagaagaagaagaagacaacgACAAAGTGGAGTATGCTGCTGTCAAATTTAACAGTGCCAGTACTCCGCCGAGAACCAGAGGTCAGGAAACAGGGGAGGATCCAGATGCATGCTACAGTACAGTCAACAAAACTGCTGAATTTAACAGAAAACTCTAGTATTTCCTTTTTCTGATTTCAAGCCATGCTAGCAGCCTCCACTTTGTTCCAGGCTAAAATGGCTCAACAACTACTCGATCTATTGCCATACACTTTCGTTCTGACATTCATGATCATCAGAGGATGACTCATTCTGACTTTGGTTATTCCCTGACTTTAACTCCAACTGCAAAGCATGGcaatatatatacaatttattttctgtgttatGTAAATATACATATGTAGGAAATTGTAAAGACCGTGttaaatatgatataaataCTTTATGATGTAAACATAGTAGCTATTCATGGTGATTATTATATAGTAGTGGAAAAGGGGGTAGGGTTGAATAAACTTTTGCTTCTTCCTATTCCTTTTTCCGGACATGTTTAATTAATattctgttttgtttctgttttgttcttttagtttttattatttaaattttttttttacatgttcgaAATAAAGCATTCATCCATTCAA
>XM_039801484.1
TTAAGACAACTCGCTTTCACATTAAGTTTCTAATGTGACTGGCTTGATACATATGTACGTTATTTACCTGCAGGcatgttttattatttctgaACTTACACACAGAGAAATGAGAGGAGCAGCTTGGAGTTTAACTGCAGCAGCGAGTGGATTGGTCGTCCTTCTCCTCACTGTACCAGTGATACAGAGTCAGAATGGCTGGGGAGTGACTTACACCTCTACTCAGATCTGTGCCTTAAAGGGATCAACAGTGGAAATACGCTGCAGCTACAGATACCCATCCACCAATGGTGATGGAGTTAAGGAAGCATTTTGGTTTACAAAAGAGAGTAATAATGTTTATGTGGATCTGAAAATGGACCTGGAGTATTCAGATCGTGTGCAGtttgactgtaaaaaaaaaggtgtgcaGTATCACTCTGAAAACAAGGACTGCACTCTGAGAATCTCAGACCTGAGACAGAGCGACTCAGCTGTGTACAAGTTCAGGTTCAGAACAGACGATTCAACAGGGAAATATACTGGTTTACCTGGAGTCACTCTGTTGGTAGCAGATCCACAGCTCCAGGTACATGTGAGGAGATCAACAGTCAGATCCCACCAACAGCCTACCTGGACAGAACTGACATGTCATAACAAGTGTCAGCTGCCTGATCATTATTCCTACATCTGGTACAAGAACGGCCAGAAATTTGGAGATAAAAAAGTTTACTTTCATCTAGACCTATTTAATCCTGCAGACAACTATTCGTGtgctgtatcaaaatatgagatGTTCCCCTCTCCTTCAGTGTATGTAAAGCTTCCCTCCGTATCAGTGAGTCCTTCTGGTGATTTAATGGAGGGAAGTTCAGTAAATGTGACTtgtagcagtgatgctaacccagcagctaACTACAGCTGGTACAAGAATAATCTAGTTTCCGAACGCCTCAGTGAAGGACCACAGCTCATCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACATGCTGGGGAGGACATCAGCAAACATCTCTATTAATGTCAAATATGGTCCAAAGCGTgcctctgtgtcagtgagtcccCCTGCTGAGATAGTGGATGGCAGTTCAGTGACtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAACCAAACACTGCTTCAAGGACCGGAAAGAAATTACTATTTCACCTCCATCAGCTCTGAGGACAGAGGCAACTACCACTGCAAGTCTGAGAATCAATATGGACTGATTTACTCCTCATCTCTATCTATAGATGTGCAGTATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgaatctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACATCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCGCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGTTTTCCCAGAAACATGGAAATCTGTCATCATTGGAACAATCCCTGCTGTTTTCCTGGTTGTCGTGTGGCTCTCTATCTTCCTACTCATAAGAAAAAAGAGAACCTCCAAGCAATTACCCGAGCCTGGAGATGGATCAGACAACAGGGAACAGTCAGAGGAGCGGGATGAACTTCACTACGCCAGTATCCACTTCTCCACGAACCAGACAGACCCTGTATACTCCAACATCAGACCAGCTGGACTCCGCAAACATGAGgggcaagaagaagaagaagaagaagacaacgACAAAGTGGAGTATGCTGCTGTCAAATTTAACAGTGCCAGTACTCCGCCGAGAACCAGAGGTCAGGAAACAGGGGAGGATCCAGATGCATGCTACAGTACAGTCAACAAAACTGCTGAATTTAACAGAAAACTCTAGTATTTCCTTTTTCTGATTTCAAGCCATGCTAGCAGCCTCCACTTTGTTCCAGGCTAAAATGGCTCAACAACTACTCGATCTATTGCCATACACTTTCGTTCTGACATTCATGATCATCAGAGGATGACTCATTCTGACTTTGGTTATTCCCTGACTTTAACTCCAACTGCAAAGCATGGcaatatatatacaatttattttctgtgttatGTAAATATACATATGTAGGAAATTGTAAAGACCGTGttaaatatgatataaataCTTTATGATGTAAACATAGTAGCTATTCATGGTGATTATTATATAGTAGTGGAAAAGGGGGTAGGGTTGAATAAACTTTTGCTTCTTCCTATTCCTTTTTCCGGACATGTTTAATTAATattctgttttgtttctgttttgttcttttagtttttattatttaaattttttttttacatgttcgaAATAAAGCATTCATCCATTCAA
>XM_039801493.1
TTAAGACAACTCGCTTTCACATTAAGTTTCTAATGTGACTGGCTTGATACATATGTACGTTATTTACCTGCAGGcatgttttattatttctgaACTTACACACAGAGAAATGAGAGGAGCAGCTTGGAGTTTAACTGCAGCAGCGAGTGGATTGGTCGTCCTTCTCCTCACTGTACCAGTGATACAGAGTCAGAATGGCTGGGGAGTGACTTACACCTCTACTCAGATCTGTGCCTTAAAGGGATCAACAGTGGAAATACGCTGCAGCTACAGATACCCATCCACCAATGGTGATGGAGTTAAGGAAGCATTTTGGTTTACAAAAGAGAGTAATAATGTTTATGTGGATCTGAAAATGGACCTGGAGTATTCAGATCGTGTGCAGtttgactgtaaaaaaaaaggtgtgcaGTATCACTCTGAAAACAAGGACTGCACTCTGAGAATCTCAGACCTGAGACAGAGCGACTCAGCTGTGTACAAGTTCAGGTTCAGAACAGACGATTCAACAGGGAAATATACTGGTTTACCTGGAGTCACTCTGTTGGTAGCAGATCCACAGCTCCAGGTACATGTGAGGAGATCAACAGTCAGATCCCACCAACAGCCTACCTGGACAGAACTGACATGTCATAACAAGTGTCAGCTGCCTGATCATTATTCCTACATCTGGTACAAGAACGGCCAGAAATTTGGAGATAAAAAAGTTTACTTTCATCTAGACCTATTTAATCCTGCAGACAACTATTCGTGtgctgtatcaaaatatgagatGTTCCCCTCTCCTTCAGTGTATGTAAAGCTTCCCTCCGTATCAGTGAGTCCTTCTGGTGATTTAATGGAGGGAAGTTCAGTAAATGTGACTtgtagcagtgatgctaacccagcagctaACTACAGCTGGTACAAGAATAATCTAGTTTCCGAACGCCTCAGTGAAGGACCACAGCTCATCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACATGCTGGGGAGGACATCAGCAAACATCTCTATTAATGTCAAATATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgaatctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACATCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCGCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGTTTTCCCAGAAACATGGAAATCTGTCATCATTGGAACAATCCCTGCTGTTTTCCTGGTTGTCGTGTGGCTCTCTATCTTCCTACTCATAAGAAAAAAGAGAACCTCCAAGCAATTACCCGAGCCTGGAGATGGATCAGACAACAGGGAACAGGTGAGCAAGGAGAACAATTCAGTTCAGAGGAGCGGGATGAACTTCACTACGCCAGTATCCACTTCTCCACGAACCAGACAGACCCTGTATACTCCAACATCAGACCAGCTGGACTCCGCAAACATGAGgggcaagaagaagaagaagaagaagacaacgACAAAGTGGAGTATGCTGCTGTCAAATTTAACAGTGCCAGTACTCCGCCGAGAACCAGAGGTCAGGAAACAGGGGAGGATCCAGATGCATGCTACAGTACAGTCAACAAAACTGCTGAATTTAACAGAAAACTCTAGTATTTCCTTTTTCTGATTTCAAGCCATGCTAGCAGCCTCCACTTTGTTCCAGGCTAAAATGGCTCAACAACTACTCGATCTATTGCCATACACTTTCGTTCTGACATTCATGATCATCAGAGGATGACTCATTCTGACTTTGGTTATTCCCTGACTTTAACTCCAACTGCAAAGCATGGcaatatatatacaatttattttctgtgttatGTAAATATACATATGTAGGAAATTGTAAAGACCGTGttaaatatgatataaataCTTTATGATGTAAACATAGTAGCTATTCATGGTGATTATTATATAGTAGTGGAAAAGGGGGTAGGGTTGAATAAACTTTTGCTTCTTCCTATTCCTTTTTCCGGACATGTTTAATTAATattctgttttgtttctgttttgttcttttagtttttattatttaaattttttttttacatgttcgaAATAAAGCATTCATCCATTCAA
>XM_039801502.1
TTAAGACAACTCGCTTTCACATTAAGTTTCTAATGTGACTGGCTTGATACATATGTACGTTATTTACCTGCAGGcatgttttattatttctgaACTTACACACAGAGAAATGAGAGGAGCAGCTTGGAGTTTAACTGCAGCAGCGAGTGGATTGGTCGTCCTTCTCCTCACTGTACCAGTGATACAGAGTCAGAATGGCTGGGGAGTGACTTACACCTCTACTCAGATCTGTGCCTTAAAGGGATCAACAGTGGAAATACGCTGCAGCTACAGATACCCATCCACCAATGGTGATGGAGTTAAGGAAGCATTTTGGTTTACAAAAGAGAGTAATAATGTTTATGTGGATCTGAAAATGGACCTGGAGTATTCAGATCGTGTGCAGtttgactgtaaaaaaaaaggtgtgcaGTATCACTCTGAAAACAAGGACTGCACTCTGAGAATCTCAGACCTGAGACAGAGCGACTCAGCTGTGTACAAGTTCAGGTTCAGAACAGACGATTCAACAGGGAAATATACTGGTTTACCTGGAGTCACTCTGTTGGTAGCAGATCCACAGCTCCAGGTACATGTGAGGAGATCAACAGTCAGATCCCACCAACAGCCTACCTGGACAGAACTGACATGTCATAACAAGTGTCAGCTGCCTGATCATTATTCCTACATCTGGTACAAGAACGGCCAGAAATTTGGAGATAAAAAAGTTTACTTTCATCTAGACCTATTTAATCCTGCAGACAACTATTCGTGtgctgtatcaaaatatgagatGTTCCCCTCTCCTTCAGTGTATGTAAAGCTTCCCTCCGTATCAGTGAGTCCTTCTGGTGATTTAATGGAGGGAAGTTCAGTAAATGTGACTtgtagcagtgatgctaacccagcagctaACTACAGCTGGTACAAGAATAATCTAGTTTCCGAACGCCTCAGTGAAGGACCACAGCTCATCTTCAGCTCCATCCAGTCCTCTGACTCTGGACAGTATTACTGTACAGCTGAGAACATGCTGGGGAGGACATCAGCAAACATCTCTATTAATGTCAAATATGGTCCAAAGCGTgcctctgtgtcagtgagtcccCCTGCTGAGATAGTGGATGGCAGTTCAGTGACtctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACATCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCGCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGACTGTTGTAGCAGTTTTCCCAGAAACATGGAAATCTGTCATCATTGGAACAATCCCTGCTGTTTTCCTGGTTGTCGTGTGGCTCTCTATCTTCCTACTCATAAGAAAAAAGAGAACCTCCAAGCAATTACCCGAGCCTGGAGATGGATCAGACAACAGGGAACAGGTGAGCAAGGAGAACAATTCAGTTCAGAGGAGCGGGATGAACTTCACTACGCCAGTATCCACTTCTCCACGAACCAGACAGACCCTGTATACTCCAACATCAGACCAGCTGGACTCCGCAAACATGAGgggcaagaagaagaagaagaagaagacaacgACAAAGTGGAGTATGCTGCTGTCAAATTTAACAGTGCCAGTACTCCGCCGAGAACCAGAGGTCAGGAAACAGGGGAGGATCCAGATGCATGCTACAGTACAGTCAACAAAACTGCTGAATTTAACAGAAAACTCTAGTATTTCCTTTTTCTGATTTCAAGCCATGCTAGCAGCCTCCACTTTGTTCCAGGCTAAAATGGCTCAACAACTACTCGATCTATTGCCATACACTTTCGTTCTGACATTCATGATCATCAGAGGATGACTCATTCTGACTTTGGTTATTCCCTGACTTTAACTCCAACTGCAAAGCATGGcaatatatatacaatttattttctgtgttatGTAAATATACATATGTAGGAAATTGTAAAGACCGTGttaaatatgatataaataCTTTATGATGTAAACATAGTAGCTATTCATGGTGATTATTATATAGTAGTGGAAAAGGGGGTAGGGTTGAATAAACTTTTGCTTCTTCCTATTCCTTTTTCCGGACATGTTTAATTAATattctgttttgtttctgttttgttcttttagtttttattatttaaattttttttttacatgttcgaAATAAAGCATTCATCCATTCAA

Function

GO: NA

KEGG:

id description
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801475.1 True 2493 mRNA 0.43 10 10464821 10473545
XM_039801484.1 False 2470 mRNA 0.43 10 10464821 10473545
XM_039801493.1 False 2232 mRNA 0.42 9 10464821 10473545
XM_039801502.1 False 2232 mRNA 0.42 10 10464821 10473545

Neighbor

gene id symbol gene type direction distance location
LOC120565874 NA coding upstream 159801 10302692 ~ 10305020 (+)
LOC120559406 NA coding upstream 168928 10245193 ~ 10295893 (+)
LOC120559277 NA coding upstream 179807 10271511 ~ 10285014 (+)
LOC120565722 NA coding upstream 374665 10087142 ~ 10090156 (+)
LOC120559226 NA coding upstream 481176 9644388 ~ 9983645 (+)
LOC120565884 NA coding downstream 561 10474106 ~ 10493894 (+)
LOC120567770 NA coding downstream 158234 10631779 ~ 10633388 (+)
LOC120565892 LOC104935002,LOC106525101 coding downstream 171706 10645251 ~ 10646090 (+)
wdr83os wdr83os coding downstream 181641 10655186 ~ 10662231 (+)
cacna1ab cacna1a coding downstream 203794 10677339 ~ 10900724 (+)
LOC120559544 NA non-coding upstream 14894 10446927 ~ 10449927 (+)
LOC120559586 NA non-coding upstream 40516 10422208 ~ 10424305 (+)
G3214 NA non-coding upstream 51372 10384147 ~ 10413449 (+)
LOC120559559 NA non-coding upstream 79042 10365462 ~ 10385779 (+)
LOC120559591 NA non-coding upstream 157156 10305788 ~ 10307665 (+)
G3516 NA non-coding downstream 396114 10869659 ~ 10869867 (+)
G3525 NA non-coding downstream 411345 10884890 ~ 10885298 (+)
G3526 NA non-coding downstream 416791 10890336 ~ 10890628 (+)
G3527 NA non-coding downstream 417759 10891304 ~ 10891630 (+)
G3507 NA non-coding downstream 432760 10906305 ~ 10954936 (+)
LOC120559244 NA other upstream 5533 10320573 ~ 10459288 (+)
G3115 NA other upstream 73476 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 201848 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 297207 10123099 ~ 10167614 (+)
G3117 NA other upstream 328662 9925671 ~ 10136159 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1723101 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 1831165 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 2057084 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 2212455 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 2319260 12792805 ~ 12796367 (+)

Expression


Co-expression Network