LOC120565892 (LOC104935002,LOC106525101)


Basic Information

Item Value
gene id LOC120565892
gene name LOC104935002,LOC106525101
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10645251 ~ 10646090 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039812002.1
ATGAGGTCCCTGTTGAAGCTCCTCGTTATTCTGTTTTGCGTCCAGAGGGGAGAGGGCCACTGGCTGAGATCGCTGAATGATCAGAAACAAGAAACCACATCTCCACACACGTCACCAAATGAAGACAAGAGAAATGGAGATCCAGCCGCAGAAGACGGCCAAACAGAAGCTCCTGGAGCCGGGCCATCCCCCGATCCCATCATCCCGATCCCAGTCCGGTCACGTCGCTCTACCCTGGACTCCCAGTGCGGCCTGCGCTCCATCCTGCTGCAGGTTCGAAACCTCGGGCTGGGCTACGACTCAGACGAGACCGTCCTCTTCAAGTACTGCAGCGGGACGTGTCCGCACGCTCGATCCAACCACGACCTCACCCTCACCAACCTGCTGGTAAGCGGGGTGCTCCCTCAGCCGGCCCCCGGGGAGCTGTGGCACAACGCGCCCTGCTGCAGGCCCACCCACCACGAGGACATGGCCTTCCTGGATAACTCGCACCGCTGGCACAAGGTGGAGAAGCTGTTGGCCGCGGGGTGCAGCTGTGTTGGCTAG

Function

NR:

description
PREDICTED: persephin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039812002.1 True 546 mRNA 0.61 2 10645251 10646090

Neighbor

gene id symbol gene type direction distance location
LOC120567770 NA coding upstream 11863 10631779 ~ 10633388 (+)
LOC120565884 NA coding upstream 151357 10474106 ~ 10493894 (+)
LOC120559619 NA coding upstream 171706 10464821 ~ 10473545 (+)
LOC120565874 NA coding upstream 340231 10302692 ~ 10305020 (+)
LOC120559406 NA coding upstream 349358 10245193 ~ 10295893 (+)
wdr83os wdr83os coding downstream 9096 10655186 ~ 10662231 (+)
cacna1ab cacna1a coding downstream 31249 10677339 ~ 10900724 (+)
LOC120570847 stx10,LOC102798899 coding downstream 290460 10936550 ~ 10952231 (+)
trmt1 trmt1 coding downstream 350638 10996728 ~ 11022119 (+)
mfng LOC103362872,LOC102307749,LOC101485425 coding downstream 439403 11085493 ~ 11119333 (+)
LOC120559544 NA non-coding upstream 195324 10446927 ~ 10449927 (+)
LOC120559586 NA non-coding upstream 220946 10422208 ~ 10424305 (+)
G3214 NA non-coding upstream 231802 10384147 ~ 10413449 (+)
LOC120559559 NA non-coding upstream 259472 10365462 ~ 10385779 (+)
LOC120559591 NA non-coding upstream 337586 10305788 ~ 10307665 (+)
G3516 NA non-coding downstream 223569 10869659 ~ 10869867 (+)
G3525 NA non-coding downstream 238800 10884890 ~ 10885298 (+)
G3526 NA non-coding downstream 244246 10890336 ~ 10890628 (+)
G3527 NA non-coding downstream 245214 10891304 ~ 10891630 (+)
G3507 NA non-coding downstream 260215 10906305 ~ 10954936 (+)
LOC120559244 NA other upstream 185963 10320573 ~ 10459288 (+)
G3115 NA other upstream 253906 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 382278 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 477637 10123099 ~ 10167614 (+)
LOC120559494 LOC103359075 other upstream 513109 10098689 ~ 10132142 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1550556 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 1658620 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 1884539 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 2039910 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 2146715 12792805 ~ 12796367 (+)

Expression


Co-expression Network