G3214


Basic Information

Item Value
gene id G3214
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10384147 ~ 10413449 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4517
GAAGaaaccattacattttggagtggATCCAAACTACGGTTTTCTAACAACAGAGGAGAGGCATCTTTAAAGACGACGTCCGTCTTCATTagagatgagaggagCAGCTATGAGTTTAACTGCAGCAGCGAGTGGATTTGTTGTCTTCcttctctctgtgtcaggtACTGTATATCTACAGTTACATTCATTCTTTAAAAGAGGGATTCTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4517 True 213 lncRNA 0.54 5 10384147 10413449

Neighbor

gene id symbol gene type direction distance location
LOC120565874 NA coding upstream 79127 10302692 ~ 10305020 (+)
LOC120559406 NA coding upstream 88254 10245193 ~ 10295893 (+)
LOC120559277 NA coding upstream 99133 10271511 ~ 10285014 (+)
LOC120565722 NA coding upstream 293991 10087142 ~ 10090156 (+)
LOC120559412 NA coding upstream 566497 9802838 ~ 9817650 (+)
LOC120559619 NA coding downstream 51372 10464821 ~ 10473545 (+)
LOC120565884 NA coding downstream 60657 10474106 ~ 10493894 (+)
LOC120567770 NA coding downstream 218330 10631779 ~ 10633388 (+)
LOC120565892 LOC104935002,LOC106525101 coding downstream 231802 10645251 ~ 10646090 (+)
wdr83os wdr83os coding downstream 241737 10655186 ~ 10662231 (+)
LOC120559591 NA non-coding upstream 76482 10305788 ~ 10307665 (+)
LOC120559570 NA non-coding upstream 141309 10241427 ~ 10242838 (+)
LOC120559558 NA non-coding upstream 261131 10119599 ~ 10123016 (+)
LOC120559560 NA non-coding upstream 276075 10107339 ~ 10108072 (+)
LOC120559557 NA non-coding upstream 285504 10096473 ~ 10098643 (+)
LOC120559586 NA non-coding downstream 8759 10422208 ~ 10424305 (+)
LOC120559544 NA non-coding downstream 33478 10446927 ~ 10449927 (+)
G3516 NA non-coding downstream 456210 10869659 ~ 10869867 (+)
G3525 NA non-coding downstream 471441 10884890 ~ 10885298 (+)
G3526 NA non-coding downstream 476887 10890336 ~ 10890628 (+)
LOC120559474 NA other upstream 121174 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 216533 10123099 ~ 10167614 (+)
G3117 NA other upstream 247988 9925671 ~ 10136159 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1783197 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 1891261 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 2117180 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 2272551 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 2379356 12792805 ~ 12796367 (+)

Expression


Co-expression Network