LOC120559277


Basic Information

Item Value
gene id LOC120559277
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10271511 ~ 10285014 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800898.1
TCTGAGCTCCACCACTGGACCACATGAACCTGAAGAGAtagagACTCTTGTCCTGCGTATGAGAACATCTCAGACACTGCAGCACAGACAGAAGACCCAGAGGAGCAGGAAGACCTGGTGTGAAGTCCAGTCAGATGCAGCTGAACCAGAGGCGGGACTCACCTGAGGGAAACAAAGTAGTACGACATTGAAATATCCCTGAGGAGAGCGAGGCTGTGGAGGATGCGTGGGAAGTGGATACATTTACCTTCAACTCCAGAAAATGTTATTGTCAGTTTTGAGTAGCAGCAGCAGAATTACTGAAAATGTACTGGCCCCATTTTCATGAAACCTGGTGAAAGGGTGTAGATTGGCCCTAGGAAGaaaccattacattttggagcggatCCGAACTACGGTTTTCTAACAACAGAGGAGAGGCATCTTTAAAGACGACGTCCGTCTTCATGagagatgagaggagCAGCTATGAGTTTAACTGCAGCAGCGAGTGGATTTGTTGTCTTCcttctctctgtgtcagTGATACAGGGTCAGGCTGTCTCGAGAGTGACTTACACCTCTACTCAGATCTGTGCTGTTAAAGGATCAACAGTGAACATACCCTGCAGCTACACATACCCATCAGCTGTAGGTGGCGTTGATAATACAGTTGAGAGAATATTATGGTTTACTAAAAAGAATAATGATGAACCTGTAGATCTGACAACAATGTCAGAGTATTCAGGTCGTGTGCAGTATAACAGTAAAAACAAGGACTGCACTCTGAGAATCtcagacctgagagagagagactcagctGTGTACAAGTTCAGGTTCATAACAAACCATTTAACAGGGAAATATACTGGTTCACCTGGAGTCACTCTGTCTGTTACAGgtCTCCAGGTGCAGGTGAACAGATTAGAGGTCCATGATTCCTCTAACTTGGCAGATCTGAAGTGTCAGAGCAGTTGTCCTCTACCTGGTCATCCTTCCTACATCTGGTACAAGAATGGACAGAACATTCAGGGACAAACATCTGATTCTTATTCAGCCTCCTTGGATCCTACAGACAGCTTTTCCTGTGCTGTAAGAGGACATGAGAAGTCCCGCTCTCCTTCAGTGTTGATAAAGGGTCAGAATGGCTTGGGAGTGACTTACACCTCTACTCAGATCTGTGCTGTTAAAGGATCAACAGTGAACATACCCTGCAGCTACACATACCCATCAGCTGTAGGTGGCGTTGCTACTACAGTTGAGCAGAGCGTCTGGTTAAGACAACAGTTTGTGGATCTGAAAACAGTCTCAGAGTATTCAGGTCGTGTGCAGTATCACTCTGAAAACAAGGACTGCACTCTGACAATCtcagacctgagagagagagactcagctGTGTActatttcaggttcataacaaACCAAGGTGGGAACTATGTTGGTTATCCTGGAGTCACTTTGTCTGTCACAGGTCTCCAGGTGCAGGTGAGCAGATTAGAGGTCGACGAGTCTTTTAACCAGGCAGAGCTGAAGTGTCAGAGCAGTTGTCCTCTAACTGGTCATCCTTCCTACATCTGGTACAAGAATGGACAGAACATTCAGGGACAAACATCTGATTCTTATTCAGCCTCCTTTGATCCTGCAGACAGCTTTTCCTGTGCTGTAAGAGGACATGAGGACTTCCCCTCTCCTTCAGTGTATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaacccagcagctaAATACACCTGGTACAAGGAGAAGCTAGTCTTTAAATATCTCAGTAAAGGACCACAGTTCGTCTTCAGCTTCATCCGGTCCTCTGACTCTGGACAGTATTCCTGTAAAGCTGAGAAAGAAATAAGGAAATACATCAATATAAATGTGAAATATGGTCCAAAGAATacctctgtgtcagtgagtccctctgctgagatagtggagggcagttcagtgactctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCTCCAAAAGCATCAGGACAGATCTTCACCATCACTGACATTAGACCTGAACACAGTGGGAATTATTACTGTGAAGCCCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGATTGTTGTAGCAGGGAGTTCAACAATGATAATGAATATCATCAGGCTGACTGTGGTGGTCCTGATGCTGATTCCTCTGCTGCTCCTGATTCTGTGGGCGAGGAAGAAGACAACTCTGAGCTCCACCACTGGACCACATGAACCTGAAGAGATAGagTTAGACTCTTGTCCTGCGTATGAGAACATCTCAGACACTGCAGCACAGACAGAAGACCCAGAGGAGCAGGAAGACCTGGTGTGAAGTCCAGTCAGATGCAGCTGAACCAGAGGCGGGACTCACCTGAGGGAAACAAAGTAGTACGACATTGAAATATCCCTGAGGAGAGCGAGGCTGTGGAGGGTGCGGGGGAAGTGGATACATTTACCTTCAACTCCAGAAGATTTTATTGTCAGTTTTGAGTAGCAGCAGCAGGTAGGAGTCAGCAGCAGCATGTAGCACAACGTTTAGAAGAATGTGGTGTTGGCAGCTTGAACTGAATCATGTCGAGGTGTCAAACATGATTTATTGTTCAGATCAGCTGATGCTCAGCTGCTCTGTGACTTACTGATGTATATGCAAGTTGATTTTCAACTGTAGAGTTAGTTTTAGGCAATGTTATGCTTAAGGCTACGAAGGATACACTTCATTTAGTGATGAAAATAATTTGATTTTGTACCTTATAAAGttcatctgaaaatgttttggcATGGGGATTTAGATAAAGACCCATAGGAGTTAGGGGGAGTTAagggggagaagaaaaaaaaaaggaaaatgattTACAACATACATTTTGTATAATATGTTATTAGTTTTTTTGGTTGCTGGTGTCTTTGGTTTGCTTATTTTGTTCATTTCTGGGGGTTTTTGTTAGTTCTGTCCCTTTTAGGCTATatcctatatatagtatatttataTAACATGTGCTGTGTATATAATTAGGCATTCTTTAGTCTAAGGTGTATGTCTAATTTTCCGTATCTTTTTTAAAGTGAACTGGGCTGAgccctgtgttgtgttttgattacaatgacTGCATAGAAAGGAACTCATGCCTTTGAGAGTGGAATATGCTTCAGTAACTACTGATTAACTGTgctgtatgtaatgtattttgtttttggacGTGATTTgcaaatgaatgaaaaacaattccaataaaagAGTTAGTTATTTTATAGACATTAAGGAACAAAGTTGTTATGCAAAACGTATTTTTGAAATTCTATGTAATAAATCACTTTTCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800898.1 True 3407 mRNA 0.43 17 10271511 10285014

Neighbor

gene id symbol gene type direction distance location
LOC120565722 NA coding upstream 181355 10087142 ~ 10090156 (+)
LOC120559226 NA coding upstream 287866 9644388 ~ 9983645 (+)
LOC120559412 NA coding upstream 453861 9802838 ~ 9817650 (+)
LOC120559524 LOC103359075 coding upstream 483959 9781934 ~ 9787552 (+)
LOC120559363 NA coding upstream 642028 9590493 ~ 9629483 (+)
LOC120565874 NA coding downstream 17678 10302692 ~ 10305020 (+)
LOC120559619 NA coding downstream 179807 10464821 ~ 10473545 (+)
LOC120565884 NA coding downstream 189092 10474106 ~ 10493894 (+)
LOC120567770 NA coding downstream 346765 10631779 ~ 10633388 (+)
LOC120565892 LOC104935002,LOC106525101 coding downstream 360237 10645251 ~ 10646090 (+)
LOC120559570 NA non-coding upstream 28673 10241427 ~ 10242838 (+)
LOC120559558 NA non-coding upstream 148495 10119599 ~ 10123016 (+)
LOC120559560 NA non-coding upstream 163439 10107339 ~ 10108072 (+)
LOC120559557 NA non-coding upstream 172868 10096473 ~ 10098643 (+)
G3184 NA non-coding upstream 215451 10025780 ~ 10056060 (+)
LOC120559591 NA non-coding downstream 20774 10305788 ~ 10307665 (+)
LOC120559559 NA non-coding downstream 80448 10365462 ~ 10385779 (+)
G3214 NA non-coding downstream 99133 10384147 ~ 10413449 (+)
LOC120559586 NA non-coding downstream 137194 10422208 ~ 10424305 (+)
LOC120559544 NA non-coding downstream 161913 10446927 ~ 10449927 (+)
LOC120559474 NA other upstream 8538 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 103897 10123099 ~ 10167614 (+)
G3117 NA other upstream 135352 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other upstream 139369 10098689 ~ 10132142 (+)
LOC120565738 NA other upstream 155012 10108094 ~ 10116499 (+)
LOC120559244 NA other downstream 35559 10320573 ~ 10459288 (+)
G3115 NA other downstream 105154 10390168 ~ 10391345 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1911632 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 2019696 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 2245615 12530629 ~ 12603122 (+)

Expression


Co-expression Network