LOC120565884


Basic Information

Item Value
gene id LOC120565884
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10474106 ~ 10493894 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811974.1
AAGGACTGCATTTTCCCTGTCTCAGCATGCACTGAAGTGTAAAGTGATGTTACAAACTTTCCGTTGTCTCCTTAGGAACTTGGTTGAATTGTTCACCGTTGAGAGGATTGCTAGAACATTGTTTAAGATACTGGCTTGGGCCTCCATTTACAAAAAAGGAAGACATGAGAAATAATCTTGTTAGTGTTGAAGAGGTAGTGTGGATGATACCGGTTTGGTCGCAGCAGGTCACAAAACTGGTGTCTTTTTctgcaaaacaacaaacaagtcATTGGCTTTGTAATTTACTGGCACCTGGTTCACTGTGTGTATTAATACTGTAAAGAGGAAGGAAGTCTAGGGTTTAACACCATCTGCTTTCTGTCTCCTGCTTACTTTCATACCCAGAGAGGAACGTTGCGATTCAAGAGAACTTCCTTATATATTAAAAGTAGaatgctttaatgtgactaATCTATATCTTGTCTACATTTGTCTTTTGTCCCTCACTGAAGCCACACAAAGATGAAAGGAGCAGCTATGAGTTCAACAGCAGCAGcgaggtttttttttgtcttgcttCTCTCTGTGCCAGTAATGCAGGGTCAGAACTGGAGAGTGACTTACAATCTTACTGAGATATGTACCTTAAAGGGATCAACAGTGGAAATAAGCTGCACCTACAGATACCCATCCAGAATAAATGGCCGTGACACTACAGTTGAAAAAACAATTTGGTTTACTCAAGTAAGTGATCGTGAGCCTGTGGATCTGAGAACGGACTCAGAGTATTCAGGCCGTGCGCGGTATCACTGCGGTAAGAACAGCTGCACTCTGAGAATCTCAGACCTGAGAAAGAGAGACTCAGCTAAGTACTATTTCATGTTCACAACAAACCAAGAAGGTGGAAAATATACCAGTTCACCTGGAGTCACTTTGTCTGTCACAGATCCAGATCTACAGGTTCAGGTGAAACCAATAGTCCACCAGGGTTATACCaaggcagagctgaagtgtCACAGCGCTTGTCGTCTCCCTGATCATCCTTCCTACATCTGGTACAAGAGTGGACAAGAAATTGAAGCACAAACATCTTCTTTTACAACCTCCTTTGAGTTGACAGACAGCTATACCTGTGCTCTTAAAGGACGTGAAGATTTCCCCTCTCCTTCAGTGTGTGTCCATGGTCAGCACTGCCACAGAGTGCTGTACGCTGAAAGAAGCGTCTGTGCCTTCAAAGGCTCATCAGTGGACATTTATTGCATGTACAGCAGTGTTGAATCTATCACATCTAAGTTCTGGTTCAGTCCTGAACGTAGTCATCAGTGGCAGAGTGTGTCCCAGCCTGAAGACCTTAGTACAGACTCCCAGTATACAGGTCGTGTTCAGGTCATTGAAACATGGAGAGGATACTCCACTCTGAGAATCTctgacctgagagagagagactcagctGAGTATCACTTCAAATACATAACAACAAGCTTTGAATGGAGGAGTAGTTTACCTGGAACAACTCTGACTGTCACAGATCCAGATATGCAGGTGCAGGTGAGGAGATCATCTTGGTATACTTCCTGGGCAGAACTGAAGTGTCACAGCCGTTGTCGTCTACCTCATTATTCTTCCTACATCTGGTACAAGAACGGACAGAAagttcagaaaaaaacattgtattcTTATTCAGTCTACTTGGATCCTGCAGACAGCTATTCCTGTGCTGTAAAAGGACATGAGGATTTCCCCTCTCCTTCAGAGTGTGTCCATGGTCAATTATGCAACAGAGTGACGTACACTGAAAGAAGCATCTGTGTCTCCAAAGGCTCTTCAGTAAACGTTTCTTGCATGTACAACAGTTACCTAGATCAAGTTAAATCTACACTCTGGTTCAGTCCTGAACATAGTTCTCTGTGGCAGAATCCTTCCCAGCCTGAAGACCTTAGTACAGACTCCCAGTATACAGGTCGTGTTCATGTTGAAACAGAGAGAGGACGCTCCACTCTGAGAATCTctgacctgagagagagagactcagctGAGTATCACTTCAAGTTCATAACACCAAGATTTGAATGGAGGAGTATTTTACCTGGAACAACTCTGACTGTCACAGCTCTCCGGGTTAAGGTGAACAGAAACACAGTCTACCCTTCTTATACCTATGCAGAGCTGACGTgtcacagcagctgcagtcCAGCTGATCGGCTTTCCTACGTCTGGTTCAAGAACGGAGCGAGAATCATGAAGGAGGAAAGTTCTTCATATAAAGACCAGTTTTATCTTGGAGACAGCATCTCCTGTGCTTTGAAAGGACATGACCATTACAGATCTTTGGCAGTGTATGCTTTGAAGGttccctctgtgtcagtgagtcccTCTGGTGAAATCATGGAGGGCACTTCAGTGACTTTGACCTGCAAcagtgatgctaacccagcaACTACTTATACCTGGTACATGGAGAACCAAAAACTTCTCAACAAAGAACCACAGCTTGTCTTCAGTTCCATCCAGTCCTCTGACTCTGGAAAATATTACTGTGCAGCTGAAAACGAGCTGGGAAAGAGGACATCTGAATACATCTTTATTAATGTGAAATATGCTCCAAAGCGTgcctctgtgtcagtgagtccctctgctaACTACACCTGGTACAAGGAGAACCAAACACTGCTTCAAAGACCAGAAGACATCTATAATTTCCCCTCCATCAGCTCTGAGGACAGAGGGAACTACTACTGCAAGTCTGAGAATCAGCACGGAGAGTTAGCCTCTAAGTCTGTATTTATAGATGTTCAGTATGGTCCAAAGcttccctctgtgtcagtgagtccctctgctgagatagtggagggcagatcagtgaatctgacctgtagcagtgatgctaacccagcagctaACTACACCTGGTACAAGGAGAATGAAGACTCACCAAAAGCATCAGGACAGATCTTCACCATCACTGACTTCAGAGCTGAACACAGTGGGAATTATTACTGTGAAGCCCAGAACAGAAGAGGACGTCAGAACTCCACCTTACATCTGATTGTTGTAGCAGGAGCATGGAAATCATTAGCCGTTGGAACAACCGCTGCTGTTGTCCTGGCTGTCATACTGCTCTCTGGTTTTATGTTGGCTAGAAAGAAGAGGGCTTTCAAGCAATCACCTGAGCCTAAAGAGAGACCAGGGGAACAGTATCTAACTACTCAGAGACAGCTGGACAATGGGCAGGAGGACCTTCACTATGCCAGTGTCCAGTTCTCCAAGAACCAGCCAGAGTCTCTCTACATCAGACCAGCTCGGCTCCACAGACCGAAGGAGGAAGAGAGCGTTGTGTATGCTGCGGTCACATTTAAGAGAAGTCAGACGGGGAGGAttcagctgtagtgttgacgaactgaccgaagagccggttaattaacccgactcgtgtcactgagccgggagaatcgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811974.1 True 3436 mRNA 0.45 15 10474106 10493894

Neighbor

gene id symbol gene type direction distance location
LOC120559619 NA coding upstream 561 10464821 ~ 10473545 (+)
LOC120565874 NA coding upstream 169086 10302692 ~ 10305020 (+)
LOC120559406 NA coding upstream 178213 10245193 ~ 10295893 (+)
LOC120559277 NA coding upstream 189092 10271511 ~ 10285014 (+)
LOC120565722 NA coding upstream 383950 10087142 ~ 10090156 (+)
LOC120567770 NA coding downstream 137885 10631779 ~ 10633388 (+)
LOC120565892 LOC104935002,LOC106525101 coding downstream 151357 10645251 ~ 10646090 (+)
wdr83os wdr83os coding downstream 161292 10655186 ~ 10662231 (+)
cacna1ab cacna1a coding downstream 183445 10677339 ~ 10900724 (+)
LOC120570847 stx10,LOC102798899 coding downstream 442656 10936550 ~ 10952231 (+)
LOC120559544 NA non-coding upstream 24179 10446927 ~ 10449927 (+)
LOC120559586 NA non-coding upstream 49801 10422208 ~ 10424305 (+)
G3214 NA non-coding upstream 60657 10384147 ~ 10413449 (+)
LOC120559559 NA non-coding upstream 88327 10365462 ~ 10385779 (+)
LOC120559591 NA non-coding upstream 166441 10305788 ~ 10307665 (+)
G3516 NA non-coding downstream 375765 10869659 ~ 10869867 (+)
G3525 NA non-coding downstream 390996 10884890 ~ 10885298 (+)
G3526 NA non-coding downstream 396442 10890336 ~ 10890628 (+)
G3527 NA non-coding downstream 397410 10891304 ~ 10891630 (+)
G3507 NA non-coding downstream 412411 10906305 ~ 10954936 (+)
LOC120559244 NA other upstream 14818 10320573 ~ 10459288 (+)
G3115 NA other upstream 82761 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 211133 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 306492 10123099 ~ 10167614 (+)
LOC120559494 LOC103359075 other upstream 341964 10098689 ~ 10132142 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1702752 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 1810816 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 2036735 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 2192106 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 2298911 12792805 ~ 12796367 (+)

Expression


Co-expression Network