G3526


Basic Information

Item Value
gene id G3526
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 10890336 ~ 10890628 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4906
CCCAtttttgatactatttatgCGCTGCATTTTTTTCCATCAATAGCGATTCAAGATATTTGTATTCTATAATTGCCAGGAGCAAGGTCTTGAGTCAGACATTTCGGGGGGACCAATGGGTGGGGTTAGCAATGTCCTCGGCAGTCAGTCTCAGTTCCTATGAGCTCAGGTTTTGTAAAAACATTTCTCCCTGTATTTTCAGTCTTACCTCTTCTCCTGTGCACATCCACAACACTCATAACCAGTGTTGGATGTACAGTATAGTAGCACACACCGGACACAGAGCGCCTGAG

Function

GO: NA

KEGG:

id description
ko04020 Calcium signaling pathway
ko04724 Glutamatergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU4906 True 293 lncRNA 0.44 1 10890336 10890628

Neighbor

gene id symbol gene type direction distance location
wdr83os wdr83os coding upstream 228105 10655186 ~ 10662231 (+)
LOC120565892 LOC104935002,LOC106525101 coding upstream 244246 10645251 ~ 10646090 (+)
LOC120567770 NA coding upstream 256948 10631779 ~ 10633388 (+)
LOC120565884 NA coding upstream 396442 10474106 ~ 10493894 (+)
LOC120559619 NA coding upstream 416791 10464821 ~ 10473545 (+)
LOC120570847 stx10,LOC102798899 coding downstream 45922 10936550 ~ 10952231 (+)
trmt1 trmt1 coding downstream 106100 10996728 ~ 11022119 (+)
mfng LOC103362872,LOC102307749,LOC101485425 coding downstream 194865 11085493 ~ 11119333 (+)
LOC120569250 LOC103136458,LOC106522476,LOC103368092 coding downstream 299154 11189782 ~ 11495847 (+)
lgals2b LOC108231364 coding downstream 796350 11686978 ~ 11692071 (+)
G3525 NA non-coding upstream 5038 10884890 ~ 10885298 (+)
G3516 NA non-coding upstream 20469 10869659 ~ 10869867 (+)
LOC120559544 NA non-coding upstream 440409 10446927 ~ 10449927 (+)
LOC120559586 NA non-coding upstream 466031 10422208 ~ 10424305 (+)
G3214 NA non-coding upstream 476887 10384147 ~ 10413449 (+)
G3527 NA non-coding downstream 676 10891304 ~ 10891630 (+)
G3507 NA non-coding downstream 15677 10906305 ~ 10954936 (+)
G3530 NA non-coding downstream 36352 10926980 ~ 11023608 (+)
G3600 NA non-coding downstream 159458 11050086 ~ 11050822 (+)
G3607 NA non-coding downstream 186225 11076853 ~ 11077060 (+)
LOC120559244 NA other upstream 431048 10320573 ~ 10459288 (+)
G3115 NA other upstream 498991 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 627363 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 722722 10123099 ~ 10167614 (+)
LOC120559494 LOC103359075 other upstream 758194 10098689 ~ 10132142 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 1306018 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 1414082 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 1640001 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 1795372 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 1902177 12792805 ~ 12796367 (+)

Expression


Co-expression Network