LOC120569250 (LOC103136458,LOC106522476,LOC103368092)


Basic Information

Item Value
gene id LOC120569250
gene name LOC103136458,LOC106522476,LOC103368092
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 11189782 ~ 11495847 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817061.1
CTCCGCCGCTGTCCAGGGATAATACTCTTTGCTTTCCCCGTCTGTGCCGCTGCAGAACGGACCGTAAAGCTGCATGCTGCCTCTTCCTACCTGCCTGCCAGACCGAGACCCCGATCAAGCTCTGAGAGTTCTTGCTTTGGCCTGTGGGGAAAGAACCATTTGCTGGGATAACATCTGTTTCCCTGCCTGAGTGGAGAAAGACAAATCCGATCCAACTGGACCACAACACGCACCGTGTATACCACCGTCAACGCCATTTTTACCATTCGATATAGCTGAAGACTCATCATTAAAAAGGACAATTTGTTGATATATGCGAAGAACCATCCAGACCCAGGAGGCTCAGCTGACGCTCTACCCAGCCCGTCCTCCAACGAGCTGgacctctttccctccctctcttttggAGTTCAGTTAATCTACTAAAGTAGAGGTGCTGATTACTTGCTTTGCTGGTGGCCACTCCAGGTGTTACTAAATACTATTATACCAAGGTGCATGTGTGCACACAGGCTTTCGTCGCTAGCGACTGGCAGACGATCTGAGGACATCAAACCCGAGGCCTTCTGCCTTTCTCTGAGAGGGAGTATTTCCTCATCTGTGTTGTCGAGACATACGGTTGTCAGGGGCTATGAGTAGCTGCTGGGGTGACAGTCTCCAAAACCCTTTGACGTGGAACACCTAAGATGGGGACAGGACTTGCTGCCATGCTGCAAGCTCAGCTCTAATCACCGTGAAGACGCCCTTCCGTTCACCTTTCTCTCTACGTAGATTTAACCCGCTTGCCCCTGACCTGCAGTCCTTTTtaatttgaaactgctgtaCGCTGCCTCTCCGCCTTCAACTCCAATTTTTTGCCCCTCCTTTCTCAAACACTCCTAATCCAAACCATGGCCAGCAGACTCTGTTTGTCCTCCATGTTTCTCTCCCTCCTGCTCCCTGCACTGTTCCTCCTCCACCTGCCTGGCATGGTGAAAGGGGACTGCTGGCTGATAGAGGGGGACAAAGGCTATGTTTGGCTGGCTATCTGCAGTCAGAACCAGCCTCCATACGAGACCATCCCCCAACACATCAACAGCACGGTTCATGACCTGAGGCTGAATGAGAACAAACTTAAGGCTGTGCTATTTACCTCCATGTACCGCTTCACAAACCTTACTGACCTCAATCTTACCAAGAACGAGATCAGTTACATCGAGGATGGGGCCTTTGCTGGACAGGCCAACCTACAGgTTCTTCAGCTGGGCTACAACAAGCTGACAAACCTGACTGAGGGCATGTTGAGAGGTCTGGGCCGAATGCAGTGCCTCTTTTTGCAACACAACCTTATTGAGGTCATTGCCAACAATGCCTTCTGGGAGTGCCCCAGCCTCAGCAGCCTGGACTTATCTTCCAATAAGTTGGCCCGTCTTGACCCATCTACCTTCACTGTCCTCAACAGGCTGCTGGTGTGTGAACTAGCAGGAAACCCGTTCCACTGTGGCTGTGAGCTCTACAGCTTCCTCACTTGGCTGGAGGTGTTTAACAATGTAACCCACACCTATGACCGTCTCCAGTGCGAAACCCCTCTGGAAATGACTGGTTATCCACTTCTGAGCCCGCAGCCCGGAAACGGAAAAAATGCCCGTTATGCTCTTTTATCAATGTGTCGCGATGGTGTGATAATTCCAGGGATGACCTCCCAGACACCGGATCAAGAAGGCTCAGGTATGGGTTTGGACAACCCAGACCAAGGTCTGTACCACCAACCAACCATATCGTCCACTGCAGACCCTACCTATAACCATCAGATTTCCATCAAGCTTCAAACTGTCTCCCTCTACACCGCTTCTCTAATGGTGCAGATCCCACGACCATACAGTAAGATGTACATCCTCTCCAAGTACAACCACACGTTTGTTGAAGACATCAAGccccttaaaaacaaaaaggaggtACTTACTttggacaaactgaaacctcACACAAATTACACTTATTGTGTGCTTTCTGCAAGCAAAACTCAGCGCAACAACCACACCTGTCTGACCTTTTCCACACGTGCTATTGGGTCAGAGGACCAGCGAACCGATCCATCCACAACTACCCACTACATCATGACCATCTTGGGATGTCTGTTTGGCATGGTCATTGTGCTTGGATTAGTCTATTACTGTCTCAGACGACGACGCATccaggaagagaagaagaaagctaTAAGTGTGAAGAAAACTATTTTGGAGATGAGGTATGGCCCAGAGGCGGCTGCGGCAGTAGCCAATGACCCCGGTGCCATGCAGCGTCTCCAGGAGCAGGCTCACCACCAGCACCACCAttcaggaggagcaggaggcaaGCTGCCCCCGTCTGCCTCCTCTAGCACAGGCATGCTCCATGGCTCAGCCAACACCAGTTCTTCTCGCCTCTCCACCCTGCCGCAAGTGGAAAAAATGGCCACTGCCTTCTCTGAGGCAATGGGCGGCAAGGGCAACTACATGGATGTGAGGACGGTGGGAATGGCAGGGGaaggcagagagggaggggtgggAGCTGGAGGAGCAGTGATAGCAGGGGAGGTAGTTGTGGATAGGCGAGGCGGGGCTGAAAATGGGATAGAGGCTGGGGAGGATTCGGATGACGATGGCCGTGGCTCAGCGTCAGAGATCTCCACCATTGCCAAGGAGGTGGACAAGGTGAACCAGATCATCAACAACTGCATTGATGCTCTGAAGCTGGATGCCTCTGCTAATGTTGTAACCACGGCTGACAATGGCAACTCTGTTTCCTCCTCCCAGCCACCAACTTGCATTGCGTCCCTCCCCCGCAACCTCCTGCCCCTCTCTCCAGGCCACCCTGGAGATCAGATCATGGCCTCCTCTCCAAAGGTGCATCTAAAGTCTCACCCCCAGCCTCATCCTCAGCCCCATCCTCAGCCACATCCTCAGCCACATCCTCATCCTCAGCTACATCAGCCGCCTCACCCCCCTTCTATGGCTCCAGTGCCCCTGGTCATGCCCCTGTCTGAGCGGCCAGGCATCAGTGGTGGGGGGTTCCTCTCCCCTCCTTACCGTGACCCACCCCCAGCCAATGCAGTGCGGCCCCTTCAGAGGCAGTTGAGCGCTGACACTGCTGTAGTGAAGAACCGTTGTGGTGTCCCCGCTGTGGGATCTGTCAAGAGCAACAGAGTGTTCAGTGTGGATATCCCTGAGCAGCGCAGCGATCCTCCCAAGTACCCAACAGAAAAAGGCAGCCCTGTGGGTTGTGGTGGAGGGGGTGGAAGTGGAGGAGCTGGCGGAATAGGAGGCTGCAACGGGAATGGGATGGGAAACATAAATGGTGGTGGGGTGAGTGTGAATGGGGGCGGGATGGGGTGTAATAAGGGGAGTGGAGGTGCGGGGGTTGGCCCcggacagcagcagcaccactTGGAAGTTCAGCCTGACTACCACAGCTCCGAGCACCGCCACTCTTTTCCTGCACTCTACTATGAGGGCGGCAACGACTCACCCTCACAGGCCCAAAAGGCCTCATTCCTGAAGCCACTGGGCCGCACCAAGAGGGATGCCACATCCACCTACTCCCAGCTCTCACCTTCTCGTcaccacaactacaactctgGCTACTCCTCCAGTCCAGAGTATTCTTCTGAGAGCACACTGCGGATCTGGGAGCGATTCCGGCCTTACAAGAAAAGCCCCAGAGAGGAGGCCTCCTATATAGCAGCAGGCCACGCCCTGCGTAAGAAGGTTCAGTTTGCCAAGGACGAGGACCTTCACGATATTTTGGACTACTGGAAGGGGGTTTCTGCCCAGCAGAAGCTGTGAGCAGCTGTGAGGGAAGCTAAGTCGAATGTTCTTAGGAAGATTCTGAAGTTCGATCCCAACAGCAGACTAATAAAGGGGAATATATGTTAATGTAGCAAGATATATGATATTTCCTGTGAGGTGTCAAGTGACATGGGTCGTTTCCCTgggtgatattttttttattgattctaTGATAAACTATTGGCATTTTAAGAGGTTGTCTGTTTTCACCACAATACTAAGTAGTAATTGACAAGAATCAAGCTGTTCACCAGACTACCTTATACTGGGCACTTTGGCCCTCGCAAGCTTCCGTAGGCCTGCTGAATCCCTACTAATGAGCAAAAAAGAGGTGGTAACAAGCACCTCTTCTTTTACCTGTCTTTTACCTCAATACTGGTACACTGTAGCTCGGTTATCTCACCAGAAGCAGCCCCCCCCCCAGCTTCTAATACCATCCTACCACCATTCACACAACAATCATTCCACTGCACCTCCAACACCTGTTCTCCTATAGAAGCATCATTTAGGGAGATAATGAGGGAGGGAGCAGGATGAGGAATTAGGTGCATTTGTTTTAGAGTAGCCTGAATATCCTTCTTTGGGGGAGGACATTAGATGGTACTTAGCGGGCTAATTGTTCTTCCTGGCATTTAGCCAGTGTAAGAATAGGTCGGGGAGGATGTGTGTTGAGCATGCTTATCGATTTGAAACACCTAACTACGTATGTTCAACGGTGTGTGGgcatgtatacagtatgtgca

Function

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 29-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817061.1 True 4549 mRNA 0.52 8 11189782 11495847

Neighbor

gene id symbol gene type direction distance location
mfng LOC103362872,LOC102307749,LOC101485425 coding upstream 70449 11085493 ~ 11119333 (+)
trmt1 trmt1 coding upstream 167663 10996728 ~ 11022119 (+)
LOC120570847 stx10,LOC102798899 coding upstream 237551 10936550 ~ 10952231 (+)
cacna1ab cacna1a coding upstream 289058 10677339 ~ 10900724 (+)
wdr83os wdr83os coding upstream 527551 10655186 ~ 10662231 (+)
lgals2b LOC108231364 coding downstream 191131 11686978 ~ 11692071 (+)
LOC120573162 NA coding downstream 635997 12131844 ~ 12136341 (+)
grap2b NA coding downstream 651417 12147264 ~ 12156380 (+)
fam83fb NA coding downstream 663455 12159302 ~ 12173782 (+)
LOC120567046 LOC102300655,LOC103479325,LOC102220725,LOC106923894 coding downstream 794664 12290511 ~ 12291542 (+)
LOC120571013 NA non-coding upstream 62362 11119952 ~ 11127420 (+)
G3611 NA non-coding upstream 66525 11122586 ~ 11123257 (+)
G3610 NA non-coding upstream 67320 11121254 ~ 11122462 (+)
G3607 NA non-coding upstream 112722 11076853 ~ 11077060 (+)
G3600 NA non-coding upstream 138960 11050086 ~ 11050822 (+)
G3660 NA non-coding downstream 23837 11519684 ~ 11520617 (+)
G3663 NA non-coding downstream 33309 11529156 ~ 11529446 (+)
G3669 LOC103371799 non-coding downstream 171707 11667554 ~ 11675358 (+)
G3696 LOC104957816,LOC103371798 non-coding downstream 201194 11697041 ~ 11700405 (+)
G3701 NA non-coding downstream 225650 11721497 ~ 11722210 (+)
LOC120559244 NA other upstream 730494 10320573 ~ 10459288 (+)
G3115 NA other upstream 798437 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 926809 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 1022168 10123099 ~ 10167614 (+)
LOC120559494 LOC103359075 other upstream 1057640 10098689 ~ 10132142 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 700799 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 808863 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 1034782 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 1190153 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 1296958 12792805 ~ 12796367 (+)

Expression


Co-expression Network