G3701


Basic Information

Item Value
gene id G3701
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 11721497 ~ 11722210 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU5102
CACACATTGAAGGTCAGAAACAAGGGGCACAAAAGAAAGCGTTTGACACGTTCAGTGTTGTGTTAAAAGTAGCATGAAGCTTACTTTCAATGATTATTCAACCTTGTTGGCACAGGTAAAAATGCTAGGCACCTCCTGCACGTTACATTCCAGCAATTAAACATATAGCCTAGGCTATGTGGCGTGATATTTATTTCATCTTACCTGGGGCGCCGCAGTCTGCGCAAGCGTCATTTTCAGGGTTTTGAAGGATCTCCCTCAATGCTCGCGTTGCTCTCTCATTTGACGACATTTCAGTTTTCAGATTCCTCCgtttttagagagagagagcgagaggggtcgggggaaagagagggggggcgCCGTCGAGCCACAAACCGCAGCTAAGGTGGGTCTCCTCTGACTCGACTCCCCCACGTGATAGGCTATAGCTAACGGGCTGCGGGCAAGTCCTCACAGGTATGCGCCCTCGGCATAGGCGAGGTGTGCCTCCGACCGTAGAAAAATCAAATCAAGGCCTCTTCAAAAAGTTTTCACGGAAACGtccattctcttttttttctcttctattgcggccctatatatatatatatatatatatatatatatatatatatatatataaatatatatgtaaaagCCAGTGATGACACCCTTCAGGTGGCCTGAGAGGCGCGTGCTGCTGCGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU5102 True 690 lncRNA 0.45 2 11721497 11722210

Neighbor

gene id symbol gene type direction distance location
lgals2b LOC108231364 coding upstream 29426 11686978 ~ 11692071 (+)
LOC120569250 LOC103136458,LOC106522476,LOC103368092 coding upstream 225650 11189782 ~ 11495847 (+)
mfng LOC103362872,LOC102307749,LOC101485425 coding upstream 602164 11085493 ~ 11119333 (+)
trmt1 trmt1 coding upstream 699378 10996728 ~ 11022119 (+)
LOC120570847 stx10,LOC102798899 coding upstream 769266 10936550 ~ 10952231 (+)
LOC120573162 NA coding downstream 409634 12131844 ~ 12136341 (+)
grap2b NA coding downstream 425054 12147264 ~ 12156380 (+)
fam83fb NA coding downstream 437092 12159302 ~ 12173782 (+)
LOC120567046 LOC102300655,LOC103479325,LOC102220725,LOC106923894 coding downstream 568301 12290511 ~ 12291542 (+)
LOC120567022 cacng2,LOC100708132,LOC108230331 coding downstream 627700 12349910 ~ 12426349 (+)
G3696 LOC104957816,LOC103371798 non-coding upstream 21092 11697041 ~ 11700405 (+)
G3669 LOC103371799 non-coding upstream 46139 11667554 ~ 11675358 (+)
G3663 NA non-coding upstream 192051 11529156 ~ 11529446 (+)
G3660 NA non-coding upstream 200880 11519684 ~ 11520617 (+)
G3626 NA non-coding upstream 251680 11469582 ~ 11469817 (+)
G3748 LOC104951079 non-coding downstream 452921 12175131 ~ 12177615 (+)
LOC120562905 NA non-coding downstream 503864 12226074 ~ 12227000 (+)
G3806 NA non-coding downstream 704400 12426610 ~ 12427488 (+)
G3880 NA non-coding downstream 966739 12688949 ~ 12690449 (+)
G3887 NA non-coding downstream 981981 12704191 ~ 12729269 (+)
LOC120559244 NA other upstream 1262209 10320573 ~ 10459288 (+)
G3115 NA other upstream 1330152 10390168 ~ 10391345 (+)
LOC120559474 NA other upstream 1458524 10255444 ~ 10262973 (+)
LOC120559251 NA other upstream 1553883 10123099 ~ 10167614 (+)
LOC120559494 LOC103359075 other upstream 1589355 10098689 ~ 10132142 (+)
LOC120567030 rac2,LOC102196216,LOC108231305,LOC107391413 other downstream 474436 12196646 ~ 12264004 (+)
LOC120565807 LOC103356709,LOC104962452,LOC102300655 other downstream 582500 12304710 ~ 12322209 (+)
mgat3b mgat3,LOC103374702 other downstream 808419 12530629 ~ 12603122 (+)
trnar-ccg NA other downstream 963790 12686000 ~ 12686072 (+)
LOC120555899 NA other downstream 1070595 12792805 ~ 12796367 (+)

Expression


Co-expression Network