G2689


Basic Information

Item Value
gene id G2689
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8474897 ~ 8477720 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU3752
ggcgagagttactctttaatttaccttaactgaacagcttcggagtcattggaacggttatatgactttttttcgggaTGAATGGTGGTCatctcgctcccccctagcgcctgtgagcggaaaaaccagcGTTGCAACTTTATGATATCAGATCTCACGaggtaacaaattgcttcatgtcactgcacacatacgcccattcaggaaccggctaacaaggtagcgatggagtttttcacactatcgtcatggctgagccggcaaaaaaagaagcagaaagctaggaaagcatcgtcggaggaacagaggaagaggaaacggcagactgaccgagagagGAGTCACACACGAGTAAAAATAGgtgctgccaaatatctattctgaagctgtaggggggagctctatagagaaacctgccagcaaaaagagagaaaacagcgAAGAGATGGCCTAAATTGCATAGCGCCTCTTTAATCAagtaaaaaacacattcattccACAAGTTGAAATATTGTTATTCCCTCAACTGTAAATCTGATGAGCAAAACAAGTCCCaaaccacagcagcagctgtgGAAATAACAGGAAATATTAAACTACACGATGTTAAGTCTCTATGCAGACACCTAGCTTTAGAAGAGGGGTGTTGAAACGTTAAGAGGAGCCAAACAAATCACGTCACGAGCAGGTGAGATCCCCGGGGAGAAatgtctccatgtttgttgctTTATGGCTGCGTTGCACAAAAGACATTCAGAGATTACGAGTCAAAACTTGCTTTGGCCTCCGGACGAACATTCCTCCAGATGAGATGTTGTCTTCATCACgtttgtctgtgttttaagcccccccaACGTATTCCTTCCagacagcgctgcctggaatcactaggattaggcaatggttagggttaggtgccttgaagtcaacggttgcagcgctgcctggaaggagacgttggggggcttaaaacaccacaaCATCGAGGCTTCATCACTGGGACGGTTCAAATACTGAACACACTCATATCctcaacatatatatacacacagtaatACACGCTCAGTGTTGAAATGCTCGGTCAAACGATGGATTAGTCGATCAACATAGCTGAGTAGAGAGATGACAGGATATTAAAGGAGAGAGAATACACTAAATTATATATCATCTTCATGTTAAACTATTATTCAAAAATAGTCGTTGGTAGCAGCTCTGGGTCACTGAAACTGATCTACATAAACACATTGTCttctgtgatgatgatgatgatgatgatgatgacgacacACTATGTGAACAGCGCCGTTTGGATCCACCCGGGTACtaaacacattaaacacaacaagACCCTATCTGAGCAAGTCAGAGTAGTTCAGGtttataaaatggaaatatatctatatctacTATTACATTCTCTGCATTTggccaaaaatataaaacacaccCAGAAATTTGAGGTACATCATTGGACACTGGGTGTGCGGAAGAACTGTATTTGTATCTTTAAGTGTGCCTTTTAAAGCACATATAAGATGTAACTTGATCACTTTATAACCAGACAGACTGCAAAGTGATCCTGAACATTccatattaaagtgctcatgttatgctcattttcaggttcataaattgtatttagaggttatatcaataggtttacatggtttaattttcaggaaacaccatattttagttgtactgcaaattgctgcagctcctcttttctccctgtgtgttgagctctgttttagctacagagtgagacatctcacttctgttccatctttgttgggagacgcacatgcacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtagctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtagctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtctgtctctgaagtaaaggctggactacaatagagctgtttggagcagttggtgaacagtgttttctgttggagatggtaagtccctttgggggggactttgggctttttcactttgtaaacctataacgtgcacaaaaaagatagaGACTTGAATActgagagctgtgtgtgtgtttacagtgcaGGTGGTTGTACCTGTTCTGCGTCCAGGTGGCTCTCTGGCGGGAGGTGGTGGTCTGCTGCCCtgctgggaggaggaggagggagagggagagggaggagggggaggagctTGGCTGCGTCCTTGGCTGCCGCCTCCCGAGGTGTGTTTTTTGTGCAGGGAGTTGTGCCTCTGTGGCAGCTCCGGAGCCCCGGCCCCGTCTACGCTGGACGCCCCGTTGGAGACGTTGCCCGATGCGTGCGGCCTgtaggggggaggagggggaggagccGAGGAGCCACCCGTTTGCGGCCTGCTGGAAGACGGAGGCGGCTTCACGGAGCTGGGAGGGGTCGGGCCTCTGCTGGGCATCGGTGGGAGGGGCTTCtctctaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU3752 True 2592 lncRNA 0.47 2 8474897 8477720

Neighbor

gene id symbol gene type direction distance location
LOC120558872 NA coding upstream 94197 8372857 ~ 8380700 (+)
LOC120558930 NA coding upstream 259856 8211071 ~ 8215041 (+)
LOC120558905 NA coding upstream 359703 8109343 ~ 8115194 (+)
ccsapa NA coding upstream 410397 8052523 ~ 8064500 (+)
acta1a actc1a,act2,zgc:86709,LOC105024319,LOC102689871,LOC100534413 coding upstream 425510 8038319 ~ 8049387 (+)
mrpl45 mrpl45 coding downstream 85328 8563048 ~ 8575327 (+)
sp2 sp2 coding downstream 170339 8648059 ~ 8669290 (+)
si:ch211-69b7.6 NA coding downstream 227147 8704867 ~ 8714096 (+)
mrpl4 mrpl4,LOC102794479 coding downstream 243012 8720732 ~ 8732510 (+)
col9a1a LOC103359055,LOC101077226 coding downstream 268212 8745932 ~ 8774048 (+)
G2685 NA non-coding upstream 11249 8460087 ~ 8463648 (+)
G2646 NA non-coding upstream 35645 8289896 ~ 8439252 (+)
G2631 NA non-coding upstream 185930 8251279 ~ 8288967 (+)
G2630 NA non-coding upstream 188323 8240740 ~ 8286574 (+)
G2692 clg6h6orf120,LOC101075423,LOC104933027,LOC103359067,LOC102197258,LOC101473941 non-coding downstream 8022 8485742 ~ 8512923 (+)
G2666 NA non-coding downstream 8398 8486118 ~ 8520808 (+)
G2704 NA non-coding downstream 58046 8535766 ~ 8542597 (+)
G2715 NA non-coding downstream 117002 8594722 ~ 8594986 (+)
G2714 NA non-coding downstream 166715 8644435 ~ 8645116 (+)
LOC120565323 NA other upstream 59821 8401715 ~ 8415076 (+)
G2590 NA other upstream 383392 8089813 ~ 8091505 (+)
G2557 NA other upstream 526644 7941547 ~ 7948253 (+)
G2530 NA other upstream 775357 7699265 ~ 7699540 (+)
G1973 NA other upstream 1940527 6532441 ~ 6534370 (+)
socs7 socs7 other downstream 139663 8617383 ~ 8643702 (+)
abcc10 abcc10,LOC107102248 other downstream 192451 8670171 ~ 8702455 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other downstream 413595 8891315 ~ 8911908 (+)
G3091 NA other downstream 994380 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other downstream 1014543 9492263 ~ 9512693 (+)

Expression


Co-expression Network