G2980


Basic Information

Item Value
gene id G2980
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 8923167 ~ 8923474 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU4194
GCTCTTCAGGGCTCCGCCAGGCTCCCCACGGCTTCCCACGGCTCATCGAGGCTCCCGGTCCGGGCTGCTGTCTCATTTGCATACGTGCTGTTACTGGAGACGTGCTGAGCTTAAGTTTATGGGAAGAGTGCCGCCGTAATTACGTGGGGGGCCCAGAGACGCGCCTGCAAGTGtatagtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4194 True 308 lncRNA 0.48 1 8923167 8923474

Neighbor

gene id symbol gene type direction distance location
LOC120555608 LOC101482510,LOC101157032 coding upstream 33612 8865659 ~ 8889555 (+)
lgsn lgsn coding upstream 124240 8793045 ~ 8798927 (+)
col9a1a LOC103359055,LOC101077226 coding upstream 149119 8745932 ~ 8774048 (+)
mrpl4 mrpl4,LOC102794479 coding upstream 190657 8720732 ~ 8732510 (+)
si:ch211-69b7.6 NA coding upstream 209071 8704867 ~ 8714096 (+)
LOC120568168 LOC104932785,LOC100704818,LOC105931195,LOC103154494,LOC106906982 coding downstream 8591 8932065 ~ 8937228 (+)
arhgap19 NA coding downstream 94499 9017973 ~ 9027145 (+)
slit1b slit1,LOC100705354,LOC102205586,LOC102298907,LOC101480949 coding downstream 113705 9037179 ~ 9113353 (+)
LOC120559502 morn4,LOC104930036,LOC101480080 coding downstream 326965 9250439 ~ 9279934 (+)
LOC120559260 LOC103370034,LOC108247445,LOC107081964,LOC107382403 coding downstream 415245 9338719 ~ 9366798 (+)
G2947 NA non-coding upstream 122418 8800467 ~ 8800749 (+)
G2946 NA non-coding upstream 122896 8799365 ~ 8800271 (+)
G2942 NA non-coding upstream 142641 8776022 ~ 8780526 (+)
G2909 NA non-coding upstream 202507 8720240 ~ 8720660 (+)
G2714 NA non-coding upstream 278051 8644435 ~ 8645116 (+)
G2986 NA non-coding downstream 18405 8941879 ~ 8942122 (+)
G3031 NA non-coding downstream 105309 9028783 ~ 9030626 (+)
G3041 NA non-coding downstream 202709 9126183 ~ 9126699 (+)
G3043 NA non-coding downstream 212717 9136191 ~ 9136407 (+)
G3044 NA non-coding downstream 229405 9152879 ~ 9155815 (+)
zbtb45 zbtb45,LOC102796714,LOC102207372,LOC100704009,LOC104952775,LOC103470204,LOC101487628 other upstream 11259 8891315 ~ 8911908 (+)
abcc10 abcc10,LOC107102248 other upstream 220712 8670171 ~ 8702455 (+)
socs7 socs7 other upstream 279465 8617383 ~ 8643702 (+)
LOC120565323 NA other upstream 508091 8401715 ~ 8415076 (+)
G2590 NA other upstream 831662 8089813 ~ 8091505 (+)
G3091 NA other downstream 548626 9472100 ~ 9531976 (+)
LOC120559285 LOC103373854,LOC100706414,LOC103154483,LOC106948732,LOC106929595 other downstream 568789 9492263 ~ 9512693 (+)
G3148 NA other downstream 848101 9771575 ~ 9772935 (+)
G3117 NA other downstream 1002197 9925671 ~ 10136159 (+)
LOC120559494 LOC103359075 other downstream 1175215 10098689 ~ 10132142 (+)

Expression


Co-expression Network