G4659 (actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625)


Basic Information

Item Value
gene id G4659
gene name actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 14971380 ~ 14973191 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6326
CCAAGCTGAATAAACACCAAGTACACAGACCAGAATTTTAGACATGTGCGCTTTATTAAGTTGTTGTGTACACCAGAGGCTTGAAGCCCCATGCACAAACCTTCATACAAGGTAGAAGTTTTGTCTTTTGcataatgacaaaaacaaactggacCAAGTATCATTTAAGGCTGAaagtacaaaaacaaaagattaCATAATTTACATAAGCAATACTACACGTCTGTTGGGCAGTGGGCCCAACCAGAGAATAAACCTTCATAGAGGCAAATAAGGTGGTgaacaaacacatctgaaatgaCCTACACAAACACGACAATGGACATATTCCTCACACATTCACACCGCCTGGGACGCTCTGTACTTCCTGCAGAGTTTCTCCCCATCAGGGGGCATGGTGCTATAGCCATAGTGATGAGGGAAAATGGGAAGTGTTGTGGGCTCAGCATACACCAGTGTGTTGGTGTAGGCATGTATGCAGAGCCAGTCGTTTGGGTTTGTagcagtgtgtgttttggggaagCGGACTGACAAGTCTTTTAGAAGCACTTCCTGTGGACAATGCTGGGGCCGGATTCATCGTACTCCTGCTTGCTGATCCACATCTGCTGGAAGGTGGACAGGGAAGCCAGGATGGAGCCACCGATCCATACAGAGTACTTCCTCTCTGGGGGAGCAATGATCTTGATCTTCATGGTGGTGGGTGCCAGGGCAGTAATTTCCTTCTGCATACGGTCAGCGATGCCAGGGTACATGGTGGTACCTCCAGAGAGCACAGTGTTGGCGTACAGGTCCTTACGGATGTCCACGTCACACTTCATGATGCTGTTGAAGGTAGTTTCATGAATACCGCAAGACTCCATACCAAGGAAAGAAGGCTGGAAGAGGGCCTCGGGGCAACGGAACCTCTCATTTCCAATGGTGATGACCTGTCCGTCAGGCAGCTCGTAGCTCTTCTccagggatgaagaggaggcagcAGTGCCCATTTCTTGCTCAAAGTCCAGTGCAACATAACACAGCTTCTCCTTAATGTCACGCACAATCTCACGCTCAGCTGTGGTGGTGAAGCTGTAACCCCTCTCAGTCAGGATCTTCATGAGGTAGTCTGTGAGGTCTCTGCCAGCCAGGTCCAACCTGAGGATGGCATGGGGCAGGGCGTAGCCTTCATAGATGGGCACTGTGTGGGTCACACCATCACCAGAGTCCATGACAATACCAGTGGTACGACCAGAGGCATACAGGGACAGCACAGCCTGGATGGCCACATACATGGCAGGGGTGTTGAAGGTCTCGAA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: actin, cytoplasmic 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6326 True 1298 lncRNA 0.50 4 14971380 14973191

Neighbor

gene id symbol gene type direction distance location
sh2d3a sh2d3a,LOC104966618 coding downstream 95198 14856366 ~ 14876182 (-)
LOC120562191 NA coding downstream 146484 14811342 ~ 14824896 (-)
LOC120567499 NA coding downstream 164064 14805750 ~ 14807316 (-)
palb2 NA coding downstream 260412 14698682 ~ 14710968 (-)
iqce NA coding downstream 307305 14647019 ~ 14664075 (-)
smcr8b NA coding upstream 67656 15040847 ~ 15052712 (-)
mief2 mief2,LOC102193621,LOC100697825 coding upstream 81260 15054451 ~ 15063940 (-)
alkbh5 alkbh5 coding upstream 92457 15065648 ~ 15070738 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding upstream 99591 15072782 ~ 15131877 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding upstream 320680 15293871 ~ 15298838 (-)
G4658 NA non-coding downstream 674 14969481 ~ 14970706 (-)
G4566 NA non-coding downstream 118547 14850961 ~ 14852833 (-)
G4450 NA non-coding downstream 531717 14439456 ~ 14439663 (-)
G4443 NA non-coding downstream 673928 14297089 ~ 14297452 (-)
LOC120558606 NA non-coding downstream 862687 14105951 ~ 14108693 (-)
G4663 NA non-coding upstream 25950 14999141 ~ 14999689 (-)
G4670 NA non-coding upstream 39734 15012925 ~ 15013189 (-)
G4669 NA non-coding upstream 55295 15028486 ~ 15029138 (-)
G4668 NA non-coding upstream 80275 15053466 ~ 15054067 (-)
G4710 NA non-coding upstream 180353 15153544 ~ 15154146 (-)
ubl5 ubl5 other downstream 67151 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 252278 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 928870 14018902 ~ 14042510 (-)
G4168 NA other downstream 1404114 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 1931100 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 453353 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1372527 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2438862 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2737448 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2844316 17817507 ~ 17835761 (-)

Expression


Co-expression Network