G4668


Basic Information

Item Value
gene id G4668
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15053466 ~ 15054067 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU6341
gATGGCTTgggggaaagaagctgttcctGAGTCTATTTGTCCTTGTCCTGATTGACCTGTAGCGCCTGCcagagggcagcaggtcagacagGCAGGATGGGAGCAGTCTGGGATGATTGCCTTAGCTCTGCTGAGGCAAcgggatgaatggatgaatggttCTTCAGGGAGGGGAGGGTGCAGCCGATGATCCTCTGTGGGGTGTTGCCCCATGAGGAGAGTCATGCAACTTTGTAAACGTTTTGCACTATTTTCATGCAAATGTCAATCAAAATGCTAAAATCATGTCATGTGAGAGCCAGCTGATAACTGTTACCATCCGCTGATAGCCTGATAACAACAGAAATGGATGACTGCCAACATGTGACATGGATTTCTGTAAGATGTAAGTCATTTCAGTTTACCTGTGTCTTAAAACAATACTCTCATGCCCATACAGGATGTACATTAAATTAGTTATTGATCACTGTAATAATTCCTCCTGCATGCTGGCAGAGAGTAGATCCGTTCCTAAAGATTTCAATAAGTGATGGGGAACAAAATCTTCGGTCCTCATTCTGAAAAAATTGTGAGCTTATCCTTAAATGTGCTGAAACTTATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU6341 True 602 lncRNA 0.42 1 15053466 15054067

Neighbor

gene id symbol gene type direction distance location
smcr8b NA coding downstream 754 15040847 ~ 15052712 (-)
sh2d3a sh2d3a,LOC104966618 coding downstream 177284 14856366 ~ 14876182 (-)
LOC120562191 NA coding downstream 228570 14811342 ~ 14824896 (-)
LOC120567499 NA coding downstream 246150 14805750 ~ 14807316 (-)
palb2 NA coding downstream 342498 14698682 ~ 14710968 (-)
mief2 mief2,LOC102193621,LOC100697825 coding upstream 384 15054451 ~ 15063940 (-)
alkbh5 alkbh5 coding upstream 11581 15065648 ~ 15070738 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding upstream 18715 15072782 ~ 15131877 (-)
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding upstream 239804 15293871 ~ 15298838 (-)
LOC120561684 NA coding upstream 256631 15310698 ~ 15311959 (-)
G4669 NA non-coding downstream 24328 15028486 ~ 15029138 (-)
G4670 NA non-coding downstream 40277 15012925 ~ 15013189 (-)
G4663 NA non-coding downstream 53777 14999141 ~ 14999689 (-)
G4659 actbb,LOC102799139,LOC103383494,LOC102218394,LOC101168921,LOC108244554,LOC106519625 non-coding downstream 80275 14971380 ~ 14973191 (-)
G4658 NA non-coding downstream 82760 14969481 ~ 14970706 (-)
G4710 NA non-coding upstream 99477 15153544 ~ 15154146 (-)
G4713 NA non-coding upstream 145678 15199745 ~ 15263432 (-)
G4722 arpc1a,LOC102781765 non-coding upstream 224191 15278258 ~ 15321383 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding upstream 274121 15328188 ~ 15329291 (-)
G4797 NA non-coding upstream 676588 15730655 ~ 15730956 (-)
ubl5 ubl5 other downstream 149237 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 334364 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1010956 14018902 ~ 14042510 (-)
G4168 NA other downstream 1486200 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2013186 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 372477 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1291651 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2357986 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2656572 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2763440 17817507 ~ 17835761 (-)

Expression


Co-expression Network