LOC120561684


Basic Information

Item Value
gene id LOC120561684
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053112.1
NCBI id CM020909.1
chromosome length 48724115
location 15310698 ~ 15311959 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804872.1
AATGAGCATTTGAGATGCAGCAAACCCCAGGGTAGATGAGCACTGGTGGATCCCAGCAGCAACACGCTGACTGCTGATTCCTGCATGGCTGAGGATGCATCAGAGGATCTCGCCTCCCCCAGTCAATCAGTTTCCTCCTTAGTGgcctcttcttttttctttcagcaCTTTAACAGCAAAACTGAACTCCTCTCCTATTTGATCTTGTGTGTTGCCAAAATGCCATTCATTCCATCTGCTGTGTCCATTTCACGCTCTGTGTCAGGACTGACCGGGAAGGAGAGACCTATCCACAACACTTCATCTACAACTACTTTGACCAAGGTCCCAAAAGAAGACAAAGCCAGTAGCTCAGTGAAGGAGCGACTGGCTTCGAACCTCAAGCAGCTGGGGAAGAAGAGCCAACCCAGGAGTCATCTGCCAACTGCCAAAGGAGTGTCAGGGACAGAGCTGCTTGCAAAGAGAAGGGAGAGATTGCTGCCTTCATCACAAACAGTCAGCTTCTTAGCATCCAACACGGGTGCGTCCCTGTCTAAGACGCAGCAGAACAAACATGTGAGCCAGAGCTCTGTGAAGACTGAGCCAGAGATGAAGACGAGGGCCAGGCATCACAAGGAGGGCCGTTTCACACTGACTCTCACACCTGAGGctgtcctgctgctgcagcGGAGGAACAATGAGAGAAATCGACATTCAGCGTCCAGAAATGCCGGAAGTGGAGGAGGCCTTTCTGGAAGCGCCTCAGATTCCAGAAGCAGGAGGGAAAACGTCTCTAAAAGGCATCAACcagcaacacagagacacagcactCCAAACAGCAGAGTCACTGCTAAAACAAACAGTGATGCTGAACTGGGAGACATAAGCTCAATTGTGAAAATCTCACTTCTGAATGAGCAACATAAGTATGATGATGTGGAGTATGAGGAAGAGGACCATGGTGTGGATGAGTGCGTGGTGCTGAAATGTACAGAGTGGCTCCGTGGGTTGGAAAACACACCGGTAACAGTGGGACACAGCCTGACTAAGAGTGCAATTGGTGTGAAAAGTTTCTAAAGATAAAATGAGAAGTGTTGCTTAAATGAGGTGTCATTTTCCAACCTGAGAATGAACTGCAGTTTTGGTTTGTGTTGGCTAGTTGCTATTTGAAGATGTGCTTGTGTTCTGTATTCCCTGATCCCTGCTTGTAATTGtataaaatataatgtttctCTTTTACTGGGCCTAGTCGCGCTAATATATTCATCCATTTCAACAGTTTT

Function

GO:

id name namespace
GO:0030001 metal ion transport biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804872.1 True 1262 mRNA 0.48 1 15310698 15311959

Neighbor

gene id symbol gene type direction distance location
zgc:77849 LOC104921184,LOC104966096,LOC102796782,LOC100695168,LOC101467750,LOC103369343 coding downstream 11860 15293871 ~ 15298838 (-)
myo15ab myo15a,LOC102296698,LOC101486664 coding downstream 178821 15072782 ~ 15131877 (-)
alkbh5 alkbh5 coding downstream 239960 15065648 ~ 15070738 (-)
mief2 mief2,LOC102193621,LOC100697825 coding downstream 246758 15054451 ~ 15063940 (-)
smcr8b NA coding downstream 257986 15040847 ~ 15052712 (-)
LOC120557175 NA coding upstream 473 15312432 ~ 15313905 (-)
foxk1 foxk1 coding upstream 65241 15377200 ~ 15393673 (-)
LOC120564677 LOC104962345,LOC107388844,LOC108244157 coding upstream 83876 15395835 ~ 15401445 (-)
gpank1 gpank1 coding upstream 98539 15410498 ~ 15414963 (-)
LOC120564766 NA coding upstream 107293 15419252 ~ 15424386 (-)
G4713 NA non-coding downstream 47266 15199745 ~ 15263432 (-)
G4710 NA non-coding downstream 156552 15153544 ~ 15154146 (-)
G4668 NA non-coding downstream 256631 15053466 ~ 15054067 (-)
G4669 NA non-coding downstream 281560 15028486 ~ 15029138 (-)
G4670 NA non-coding downstream 297509 15012925 ~ 15013189 (-)
G4729 arpc1b,LOC100695691,LOC102293678,LOC101469153 non-coding upstream 16229 15328188 ~ 15329291 (-)
G4797 NA non-coding upstream 418696 15730655 ~ 15730956 (-)
G4798 NA non-coding upstream 423396 15735355 ~ 15735682 (-)
G4799 NA non-coding upstream 423830 15735789 ~ 15736178 (-)
G4815 NA non-coding upstream 469438 15781397 ~ 15781753 (-)
ubl5 ubl5 other downstream 406469 14901146 ~ 14904229 (-)
LOC120555938 LOC103372451,LOC105939179,LOC103462061,LOC108245380 other downstream 591596 14712144 ~ 14719102 (-)
LOC120558548 pde4a,LOC102299733,LOC102791271 other downstream 1268188 14018902 ~ 14042510 (-)
G4168 NA other downstream 1743432 13531753 ~ 13567266 (-)
LOC120560438 dnal4,LOC108261343,LOC106591471,LOC108436609,LOC108412416 other downstream 2270418 13037270 ~ 13040280 (-)
sdk1a sdk1,LOC104962449,LOC103362694 other upstream 114585 15426544 ~ 15685639 (-)
LOC120558720 NA other upstream 1033759 16345718 ~ 16347922 (-)
LOC120569099 NA other upstream 2100094 17412053 ~ 17421098 (-)
LOC120560175 NA other upstream 2398680 17710639 ~ 17713898 (-)
epn3b LOC102786458,LOC100695148,LOC103373411,LOC101478063,LOC105919984,LOC107373120,LOC108247943,LOC102303243 other upstream 2505548 17817507 ~ 17835761 (-)

Expression


Co-expression Network