hsbp1b (hsbp1,LOC102784925,LOC102222837)


Basic Information

Item Value
gene id hsbp1b
gene name hsbp1,LOC102784925,LOC102222837
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 37810354 ~ 37815552 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121849
TAGAACAGCTGACTGTGCGGTGGGTGGTGGTGCGAAGGATTGCTATCTATTTCaaacagttagctagctacaagGCTACAGCACCTGATAGTGAATACAAACTGTAGACGGCGTTTTGAATTTGTATTCTGTTCGGGCACTGATATTGATTTACACCTCAACATGGCGGAGACGGATCCCAAGTCGGTGCAGGACCTTACCAATGTGGTCCAGACACTGCTGCAACAGATGCAGGACAAGTTCCAGACCATGTCGGACCAGATCATCGGGAGGATTGATGAGATGAGCACGCGCATTGATGACTTGGAGAAAAACATCGCCGACCTGATGACCCAGGCTGGTGTTGAAGAGATTGAGGCAGCGCCTGAAAAGGCTAAAGAGGGACAAGGCTCTTAATGAAGGCAGGTAACCCGGTGTGAAGTCGGTCCTATACCCAGGAGCAGCAGACTTTTCCATTCTGATAATGACTTCTATTGATTTGGTGTGTCGTCGTGTGAAatgcttttttatatattgaatATTGTGATAAACGGTTAGTTACGTAATGACTTGAAAAGTTGAACTTTATTTGTGAGCTAGAATAGTGTGATATGCCCTTCAGAACATTTAAGTTCTCATGTGCAGGAATGCAACTTATGGATTTTTGTGCGCTGACCCGGAGGTTATGTCGATGCCATCCTATATCATAATTAAATCCCACGAGGCGATGGCTGATGGGGACAGTTTTGCCCTAGCCTGTGCTGAGAAGTACAACCTGCGGGCTAACGGGCCAGTGGAACCTCCACCCCCACCAACATGGGAAATGGGCACAGTGAACATCTGAAGCCTGTAGTGTTTTACAAACAGCACTGTTACTACCAAGGTGTGGGATGCATTCCAATTTCAACTCCTTTTTCTTCTATTAAAAGTGATTTAATACACTGCTGTCTGTCATGTATTACATAATAAATGTGGCTAGGTGCTGAGAAtttttaataatataaataactc
>XM_039808259.1
ACAGCTGACTGTGCGGTGGGTGGTGGTGCGAAGGATTGCTATCTATTTCaaacagttagctagctacaagGCTACAGCACCTGATAGTGAATACAAACTGTAGACGGCGTTTTGAATTTGTATTCTGTTCGGGCACTGATATTGATTTACACCTCAACATGGCGGAGACGGATCCCAAGTCGGTGCAGGACCTTACCAATGTGGTCCAGACACTGCTGCAACAGATGCAGGACAAGTTCCAGACCATGTCGGACCAGATCATCGGGAGGATTGATGAGATGAGCACGCGCATTGATGACTTGGAGAAAAACATCGCCGACCTGATGACCCAGGCTGGTGTTGAAGAGATTGAGGCAGCGCCTGAAAAGGCTAAAGAGGGACAAGGCTCTTAATGAAGGCAGGTAACCCGGTGTGAAGTCGGTCCTATACCCAGGAGCAGCAGACTTTTCCATTCTGATAATGACTTCTATTGATTTGGTGTGTCGTCGTGTGAAatgcttttttatatattgaatATTGTGATAAACGGTTAGTTACGTAATGACTTGAAAAGTTGAACTTTATTTGTGAGCTAGAATAGTGTGATATGCCCTTCAGAACATTTAAGTTCTCATGTGCAGGAATGCAACTTATGGATTTTTGTGCGCTGACCCGGAGGTTATGTCGATGCCATCCTATATCATAATTAAATCCCACGAGGCGATGGCTGATGGGGACAGTTTTGCCCTAGCCTGTGCTGAGAAGTACAACCTGCGGGCTAACGGGCCAGTGGAACCTCCACCCCCACCAACATGGGAAATGGGCACAGTGAACATCTGAAGCCTGTAGTGTTTTACAAACAGCACTGTTACTACCAAGGTGTGGGATGCATTCCAATTTCAACTCCTTTTTCTTCTATTAAAAGTGATTTAATACAC

Function

symbol description
hsbp1 Enables identical protein binding activity. Involved in axonal transport of mitochondrion. Predicted to be located in nucleoplasm. Predicted to be active in cytosol and nucleus.

NR:

description
PREDICTED: heat shock factor-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121849 True 990 TUCP 0.44 4 37810354 37815552
XM_039808259.1 False 917 mRNA 0.46 4 37810423 37815548

Neighbor

gene id symbol gene type direction distance location
mlycd mlycd coding downstream 42303 37751573 ~ 37768051 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding downstream 929715 36858995 ~ 36880639 (-)
e2f4 e2f4 coding downstream 1084771 36716060 ~ 36725583 (-)
elmo3 elmo3,LOC100697255,LOC103379556 coding downstream 1096663 36684992 ~ 36713691 (-)
rspry1 rspry1 coding downstream 1298056 36497369 ~ 36512298 (-)
LOC120563886 LOC104944047 coding upstream 635785 38451337 ~ 38500027 (-)
bida NA coding upstream 734041 38549593 ~ 38555756 (-)
wee2 wee2,LOC102782747 coding upstream 741449 38557001 ~ 38562972 (-)
agk agk coding upstream 759787 38575339 ~ 38582534 (-)
fgd4a LOC104944238 coding upstream 791702 38607254 ~ 38672771 (-)
G90532 NA non-coding downstream 96264 37713609 ~ 37714090 (-)
G90524 NA non-coding downstream 112377 37697765 ~ 37697977 (-)
LOC120564494 NA non-coding downstream 236225 37563996 ~ 37574129 (-)
G90495 NA non-coding downstream 675815 37134112 ~ 37134539 (-)
G90491 NA non-coding downstream 691087 37119055 ~ 37119267 (-)
G90566 NA non-coding upstream 57207 37872759 ~ 37907697 (-)
G90584 NA non-coding upstream 201720 38017272 ~ 38055320 (-)
G90598 dyrk4 non-coding upstream 274221 38089773 ~ 38090905 (-)
G90604 NA non-coding upstream 281287 38096839 ~ 38099628 (-)
LOC120563873 NA non-coding upstream 317505 38133057 ~ 38134205 (-)
tigara NA other downstream 957713 36843553 ~ 36852641 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 1288391 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 1292427 36512962 ~ 36517927 (-)
G90150 NA other downstream 1943043 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 2638671 35144389 ~ 35171683 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 626315 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 701627 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 1846016 39661568 ~ 39680139 (-)
G91022 bcar1 other upstream 1865233 39680785 ~ 39687012 (-)
G91027 LOC104961098 other upstream 1887077 39702629 ~ 39703068 (-)

Expression


Co-expression Network