tigara


Basic Information

Item Value
gene id tigara
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36843553 ~ 36852641 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121733
CTAAACTCTCTGTGCGACATTTGCTCTCAAGGAGCGAGACGCGCACTGACTTCAGTCGTCTGTATTACTCCGCCGTTGCATTGAAGAGCATGGCAGCTCTAACATTTGGGCTAACACTTGTTCGACAGCCAGGGCATCGATTCAGTCTTGTCTGAGATCGGTCTGCAGCAGGCCGAGGCAGCAGGCTGTTACCTGAAAGATGTCGAGTTCACCAACGTGTTTGTCAGTGATATGCTGCGGGCCCAGCAGACTGCTGAAACAATAGTGAAACACAACAGTAGTTGTTCTGCTCTCCGAATGGTGTGTGACCCTTTACTTAAAGAGAAAagctttGGGATAGCAGAGGGGAGACGGGTGCAGGAGTTGATAGAGATGGCCCAGGCAGCCGGTCAGTCGTTTACAGACTTCACCCCTCCGAAGGGGGAGACTCATGAGCAAGTGAGGCTAGGGATGTAGCTGTTGTACTAGGGTCAAGTGTATCTGTTTCTCTGTTATGTCATTGTTCATACGGGTGTAAtacttctctctctgttctccttcCTGTTTTTTAACAGAAATATTTGTCTGTATCACTCTttgctcttctttttcttcttaaaagCTCGTAGTTGTGCCACAGAATTGCTCGGCTTAAGACAGTACAGCATGGCATGCTCTGCACATGGTACCAATAATGCGGTGCTCAGgtgtggaatgtaactaagtactaaTGGTGGGAACGTCACGATTCGATACACAATACAAGGCACGGCTCACAATACCGATTATATCACAATACAGCAATTCTGCGTTAATTAATATTATGCTAGACAATGCTATTGATTAGATTAGGTAGACCTAGAATTGGAAAATGTCAGTGCTACATCAGCAAAATATAAGACACtgagcacacatacagaatatacaagaaataataTAATGATGCACCACGACATCGGTCTAACTATTAATACAAAATGCCCATGAAAAGTGcaggttttctttctttctttatttactactactactactactaagtCCAATTCTGCAGCCTGAGTGTTTCAGTGTGTAAATTAATATTACACAACTATATAGAAACTATGGGTCCAGACTTTGGACTTAAACGTGGCTGGGGCATCTGTTATTTTCCTCAAACTGCTCTTCGCCATCCCGTGGaaaacctcttcctcttctgcTGGTTAACCTATGTTAGAGTTTCCCCTCATTCATGTGTTGAGCACCACCTCAAGGAGCATTGAAGTAGCGACCCTATGAAATCTATTTAGAgcttattttattcattaaaatATCCATACATCACAAATAGAAGGACAACAATATAATGCTGTATCAatattttcaacaaaaaaagtcatagtatagaatgttgtaaaaagtcacagtatagtatgaggaaaagttcataaaaaaaagtcatagtatagtatgtttaaaaaaagtcatatagtatatttaaaaaaagtaaaaaacagtcatagtatagtatgttgaaaaaaaatcatagtatagtatgtcaaaataatcatgaaaaagtcatagtttactATCTGGAAAAATTttaatagaatagtatgtcgaaaaatatgataaacaattcatagtatagtttgtcaaaaactGGCATGAATAGTCATAacatagtatatcgaaaaaagtcatagtgtagtatgctgaaaaaagtggtaaaaaagtcatggtacagtacgtcgaaaaaagacatagtatttaaaaaagaaatcatgaatATTAAAACACAACTTTCCATTTTCCAAACATTCTCCTATCACCCTGAGCAATCTGACCTGACACACAGGTTTATGTTTTGGACAAATTagtctttttcactttgtatatTGGACCTCAAAACCCCTGCAACACTTAAGGTTTGAACACACGACTTTCAGTCTTGTAAGCATTCTTATATCACCCTGAACTATCTGACCCAACACACATGACTGTAGTGTCTTTACGATTTGATTTCATCACTTAAGACTCACCGATAAATAGTATAGTAATTcatcacaaaaaataaaataataagtcATGAAGTCatgaataagtcatagtatagtatgtcgaaaaagagacatagtatagtatgtcaaaaaggtaatggtatagtatgtcgaaaaaagtgctaaagaagtcatagtatagttagtcgaaaaaaggcataaaaagtcaaagcatagtatataatatataattgatAAAACAAGTCGTTGTATAGTACGTACAAAATAGTCagagcatagtatgtcgaagaaagtgatgaaaatcatagtatagtatgtcaaagaaaatcTGGAAGAAcgtgcaaactccacacaaaaaaagtcacGACCAAAGAAAGTTGAAGAATAAGAATTGGATAACAATACTgtgaatcagcattcacacaattaAAAATAGCAGAAGCAATTGAATAGTAGCCATCATGTccataaaggtcccatgacatggtgctctttggatgcttttatataggcctt
>XM_039809721.1
atattcaacaacaaaaccttATGGAACAGCATCTACACATTTTTGTGCCATAACTGTTTGTATGTAGATGttttaacagaaaaaaaggagaatagAGGCTATGTGGGACTCACATTTTTGGGGCTGCAGCCATTTTTTTTAGTATACTGAGCAATATTTGATTTCAAAGAAATCTAAAAGTATTCAGATTATATATATTGAGTTACCTAGCTAGTTAGGCTAGCCtgcagtgctgcggaggaaggtctgtctgtctgcaatGAGTGGCTTATATATAGAGTATTACAGGTTTCTTATTTCATAATTCTATTCAACCAATCAGAAGAGGGGCTAAATACTTACAAGCTTTTACGTCTGCATCATATAGCCTATTAATAATGTTCTAAATGTCGAATCCATTCACGTGATACTATTGGGCCACCTGTGAAAGTAACCCAATCACTGCAGCATGTTCCAACTTCCTCGCAAAATGTTGACAGAGTGGTCTAAACTCTCTGTGCGACATTTGCTCTCAAGGAGCGAGACGCGCACTGACTTCAGTCGTCTGTATTACTCCGCCGTTGCATTGAAGAGCATGGCAGCTCTAACATTTGGGCTAACACTTGTTCGACATGGGGAAACGCAGTACAATAAAGAAGGCCTGCTACAAGGCCAGGGCATCGATTCAGTCTTGTCTGAGATCGGTCTGCAGCAGGCCGAGGCAGCAGGCTGTTACCTGAAAGATGTCGAGTTCACCAACGTGTTTGTCAGTGATATGCTGCGGGCCCAGCAGACTGCTGAAACAATAGTGAAACACAACAGTAGTTGTTCTGCTCTCCGAATGGTGTGTGACCCTTTACTTAAAGAGAAAagctttGGGATAGCAGAGGGGAGACGGGTGCAGGAGTTGATAGAGATGGCCCAGGCAGCCGGTCAGTCGTTTACAGACTTCACCCCTCCGAAGGGGGAGACTCATGAGCAAGTGAAGGAGCGAGTCAAAGAGTTTCTGGAGAAAATGCTCCAGCAAATTGGGGCCGAACACTGGCATGAAACCTCTGCATCTGCTCCACCCGAAACATCTCCTGTGGTGGGACAGGCAGACGATGGGGTCAGGGGCGTCCCGGTCCACACTTTGGTCGTCACCCATGGGATCGTCATCTACGTGGCAGTGCGCTTCTTTGTGGAGGAGTTACATTGCTCCTTGCCTTCAGATTTTGACAGAGCACATATGTTCTCCTTATGTCCTAACACAGGCCTATGTCGCTTTATACTAACCATGACAAAAGAGGACGACAGGTTCAAATTGTCCGGGATCCGCTGTGTGTTCCTCCACAGGGGGGACCATGTTATACAGAACGGAGCTAGAtgaatggagtttttttttaataagctgTAGAAGATAACTGAGTTTAAGATTTTAggttctgtatttattgttcattTGGTGCTCCGTCACCTCACAGTACAGCTTAATAAAACGTTGGCATCAGTGGATGAGCTGTTTCCTAGTTGTTCAATATAAGCATGTTTTGATAATGTAATTATTAAATACAAATTGTAggtgctgtttattattgtatagTTTACCCAGCTGCAGTATGTGTTAAAAACACACGTCATAAAATACGTAAATGAATTGAATTCAGTAATCCAGTttataatgaaattaaaaaagtatgCATCCCCATTATGTAATACAGTGGCCTTCAACAAATAGGCTGTTTTATTTTCAGGGTTTGAATGCTGTCTCACAAGTCGAGCACCTTCATTTAAACTCATGTTGCAGGGCGATGTCATCACTTTGTTACTGTCTCGCTGTTCATTACTGTAAACATGGGCAGCTGTGtgctttaaccctcctgttgtcctcgggtcaaatttgacccattttcaaaaggtttctatgtcagaaatttgggtttctctcaaccaaattgtcaaaaaaaataacgtggatggttccatacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121733 True 2492 lncRNA 0.37 4 36846823 36852156
XM_039809721.1 False 1948 mRNA 0.43 6 36843553 36852641

Neighbor

gene id symbol gene type direction distance location
e2f4 e2f4 coding downstream 117970 36716060 ~ 36725583 (-)
elmo3 elmo3,LOC100697255,LOC103379556 coding downstream 129862 36684992 ~ 36713691 (-)
rspry1 rspry1 coding downstream 331255 36497369 ~ 36512298 (-)
LOC120564168 arl2bp coding downstream 348521 36485748 ~ 36495032 (-)
LOC120563930 aars,LOC102788534 coding downstream 414444 36394437 ~ 36429109 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding upstream 6354 36858995 ~ 36880639 (-)
mlycd mlycd coding upstream 898932 37751573 ~ 37768051 (-)
LOC120563886 LOC104944047 coding upstream 1598696 38451337 ~ 38500027 (-)
bida NA coding upstream 1696952 38549593 ~ 38555756 (-)
wee2 wee2,LOC102782747 coding upstream 1704360 38557001 ~ 38562972 (-)
LOC120563961 NA non-coding downstream 11975 36788789 ~ 36831578 (-)
G90422 LOC103466852 non-coding downstream 194866 36636576 ~ 36648687 (-)
G90360 NA non-coding downstream 311561 36530971 ~ 36531992 (-)
G90181 NA non-coding downstream 735292 36106593 ~ 36108261 (-)
G90144 NA non-coding downstream 1049307 35794030 ~ 35794246 (-)
LOC120563667 NA non-coding upstream 232486 37085127 ~ 37088496 (-)
G90489 NA non-coding upstream 246253 37098894 ~ 37099191 (-)
G90491 NA non-coding upstream 266414 37119055 ~ 37119267 (-)
G90495 NA non-coding upstream 281471 37134112 ~ 37134539 (-)
LOC120564494 NA non-coding upstream 711355 37563996 ~ 37574129 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 321590 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 325626 36512962 ~ 36517927 (-)
G90150 NA other downstream 976242 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 1671870 35144389 ~ 35171683 (-)
G89928 NA other downstream 2165452 34676243 ~ 34678101 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 957713 37810354 ~ 37815552 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 1589226 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 1664538 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 2808927 39661568 ~ 39680139 (-)
G91022 bcar1 other upstream 2828144 39680785 ~ 39687012 (-)

Expression


Co-expression Network