bida


Basic Information

Item Value
gene id bida
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 38549593 ~ 38555756 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810014.1
CGCGACAATAACAGAATCAGTCAGACGGACTAGCAGCTAGCGACCTCAGCAGGACGGTTGTACGAATCTAGTTAGTTGTAGAAAGTTAAAAGCTACCCGGCATAAGAAACGAATaccgaaAGACGTTATCGATGGATAACCGGGGGGATCTGACCAGCGGGCAGAACGCCGCCGCCCTGGTCATGTTGGCCTTCCTTCAAGCTGACTGCAGAACTTCAGAATACGGGAAGGAGCTTCTCTCCCTGGGCAAGGATTTAAATCTTACCCGGGACATCGACGATCGGGACGAGGACCTTGAAACTGATGGCCACCTACCTAGTCGCTTCACAGCTGCTCTGGATGATATTCAGCCTTCAGTGGAGCTGCAGTGGCCTAGGAACCGTGTAGAGGCAGCCAACCTCCAGCAGATCGCAGAAGGGCTGAGAGAAATTGCAGACCAGCTGGAacacgttgttgttgttgctcagGCTACCCAGAACCTGAGGAGGAACCTAACCAACTCCCCCTCTGACCAGTGGAAAGACCACCTCACCCAGGAGGTGAGGAAGGCGATGAGGCACGGCATTGGTCTGGAGCATCTACCTCAAGAGCGAGTCATGATGGCCCTCACGCTCACCCTGGTGAAGGGGGTGTGCGAGCAGGCCCCTCGGCTGCTGAGAAAACTCTTCCACACCGCGCTGCAGTACATCAACCCCGCGAGGGCCAGGTGACTCGCGAGCTGCAGGCCTGAGAGGAAGTAACTGAGAAACGGCTGGAGGAAGACGGCTGAAGCCGAAACTGGCACCTGCTCCTCATGACCAGTCGACTGTGAAAGGAGCTGCGtttagttgtaaaaaaaaaaaaaaaaaaaaaacttttcacatgaaagaaaagagacgatgaatttgtttacagttaTATTTTGGAAACAGGTTGAGTCTGACACTTGAATTTTGACATTACTTTGTGCTCTGTTTATTCTTGCTTAAAAATGTAGCTTTTGATtttgtactttaaaaaaaagatttttgtattcaattattttgtttttggaatACACGGTGTCATTTGATTAAATATATTTTCCTGG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016070 RNA metabolic process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0046483 heterocycle metabolic process biological_process

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810014.1 True 1069 mRNA 0.49 4 38549593 38555756

Neighbor

gene id symbol gene type direction distance location
LOC120563886 LOC104944047 coding downstream 49566 38451337 ~ 38500027 (-)
mlycd mlycd coding downstream 781542 37751573 ~ 37768051 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding downstream 1668954 36858995 ~ 36880639 (-)
e2f4 e2f4 coding downstream 1824010 36716060 ~ 36725583 (-)
elmo3 elmo3,LOC100697255,LOC103379556 coding downstream 1835902 36684992 ~ 36713691 (-)
wee2 wee2,LOC102782747 coding upstream 1245 38557001 ~ 38562972 (-)
agk agk coding upstream 19583 38575339 ~ 38582534 (-)
fgd4a LOC104944238 coding upstream 51498 38607254 ~ 38672771 (-)
bicd1a LOC100693700 coding upstream 120405 38676161 ~ 38713601 (-)
LOC120564458 NA coding upstream 160899 38716655 ~ 38720367 (-)
G90790 NA non-coding downstream 33316 38511305 ~ 38516277 (-)
G90780 NA non-coding downstream 122945 38386745 ~ 38426648 (-)
G90779 NA non-coding downstream 124340 38379982 ~ 38425253 (-)
G90766 LOC102791730,LOC106676324,LOC106676157 non-coding downstream 192932 38288663 ~ 38356661 (-)
G90769 LOC104941801,LOC106537066,LOC101155598,LOC107389344 non-coding downstream 253210 38296054 ~ 38296383 (-)
G90806 NA non-coding upstream 15578 38571334 ~ 38573356 (-)
G90846 NA non-coding upstream 295460 38851216 ~ 38879586 (-)
G90867 NA non-coding upstream 462210 39017966 ~ 39018784 (-)
G90871 NA non-coding upstream 494988 39050744 ~ 39054467 (-)
G90891 LOC104942279 non-coding upstream 730947 39286703 ~ 39293816 (-)
atp6v1e1a LOC103365022,LOC103380037 other downstream 20870 38517179 ~ 38528723 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other downstream 100318 38441867 ~ 38449275 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other downstream 734041 37810354 ~ 37815552 (-)
tigara NA other downstream 1696952 36843553 ~ 36852641 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 2027630 36518240 ~ 36521963 (-)
G91021 bcar1 other upstream 1105812 39661568 ~ 39680139 (-)
G91022 bcar1 other upstream 1125029 39680785 ~ 39687012 (-)
G91027 LOC104961098 other upstream 1146873 39702629 ~ 39703068 (-)
G91106 NA other upstream 1320212 39875968 ~ 39877362 (-)
carmil2 carmil2,LOC102796014 other upstream 1436053 39991809 ~ 40049426 (-)

Expression


Co-expression Network