elmo3 (elmo3,LOC100697255,LOC103379556)


Basic Information

Item Value
gene id elmo3
gene name elmo3,LOC100697255,LOC103379556
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36684992 ~ 36713691 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808367.1
CTCAAACCCTCGACTGTACGACTCAAAAGCAACCCGGAACATTTAAGTCAACTAATCATTCCTGAAAACGTATTGCAAGGAGTTTGCTCCAGTTTTCCGAGCAGTTCAAATGTTACGCTAAGAAAAGTCATTTCTGCGGGCTGAGTTAGTTCTTTCTCAGGGGGGGGAAAAGACAAATGTTTCTCGCTCCGACTGCGGCGGTTCCTGTGGGACTATAGCCCTCGACTTGTCTTTTCAAAGCAGCTAGAGAGTGGTGGAGTCGAGAGGTGCCAACATGCCTCAACAGAAGGACATAGTAAAGATAGCCATCCAGATGCCTGGGGCCTACCCCCAGCTCATACAACTGGACCAGaAAAAGCCCCTGTCTGCTGTAATAAAGGAAGTGTGTGATGGctggaaTCTCCCAGGTCCTGAAAACTACGCTCTGCAGTATGCTGATGGAGTGCAGATGTACATCACTGAATCGaATCGTCTGGACATTAAGAACGGCTGCATTCTGCGTCTGACCAAGGCACCGGGTCGCTGTGCAGAAGACTTGTACAAGGGCATCCAGAGCTCAGACGCGGGCGTTCGCTGCGATTCGCTGAAGGAACTGGCGAGCGTTTCCACAGACGTGACCTTTGCTCAGGAGTTCATCAGCCGAGACGGACACCTCTTATTGGTCAAGATAGTAGAGGACTGTAATGAGAGTAATGTGATCATGACCCACACACTGACAGGCTTCATGGAACTGATGGATCATGGGATAGTTTCATGGGAAAACCTCTCGTCTGTCTTCATCAAGAAGATTGCTAGCTTTGTCAACGCAAAGCCGACCGATGCATCAATACAGCAGGTGTCCTTGGACATCCTGGAGAGCATGGTGCTGAGCAGCTCCAACCTCTTCCTGCAAGTCAAACTGGAAGTCACTATGGAAAGGCTCATCGCTCACCTCCAGGTGACGAATCAGCAGATACAGACCAAAGCCATGGCCCTATTAATGGCACTACTACAAACAGCCGCtgactcagacagacagGATATGTTTGCATTCCTGAATAAGAAGAATCTCCGTCAGTACATCTATAAGAACATCATCCATAGTTCTGGTTCCGTCCAGGACGAGATGGCCCACTACCTCTATGTCCTACAGTCAGTTACCTTAAATCACCTGGAGCCTCGCATGAGGACGCCTCTGGACTGTTACAGCCAGGAGCAGAGAGACATCCTTCACGGTTTGCGGCAGGCAGCGTTTGAGACCGAAAGCGACAACAGCCTGAGCCACGAGAGACGACGCTCGCTCTGCGCCAAAGAGTTCAAGAAGTTAGGCTTCTCTAACAATAGTAACCCTGGTCAGGACTTGGTGCGAACGCCTCCTGGTCTTCTAGCTTTGGACACCATGTATTATTTTGCTGCACGCTATCCTGATGCCTACAGCAGGTTTGTCCTGGAGAATAGCAGTAGAGAAGACAAACATGAGTGTCCATTTGCCAGGAGCAGCATCCAGCTCACACTCATCCTGTGTGAAATCCTTCGTATCGGAGAGCCCCCCTCAGAGACGAGATCTGACTACCACCCCATCTTCTTCAGTCAGGATCGGCTGATGGAGGAGCTGTTCTGTGTCTGCATCCAGCTGCTCAACAAGACCTGGAAAGAGATGAGAGCCACACAGGAGGACTTTGACAAGGTGATGCAGGTGGTGAGGGAGCAGATAACCAGGACACTGTCCAGTAAGCCCACCTCCCTGGAGCTCTTCAAGAACAAAGTCAACGCACTCAACTACAGCGAGATCCTCAAACTGCGGCAGACAGAACGGCTGCACCAGGAAGAGACTCTGGCTCCGCCCGTACTtgAGCTCAAAGAGCGCCTGAAGCCAGAGCTGCTGGAGTTGATCCGCCAGCAGAGACTCAACAGGCTGTGTCAAGGAACAATGTTCAAGAAGATTAGCAGCCGACGCAGACAGGatAAACTGTGGTACTGCCGCTTGTCGCCCAATCACAAAATGCTTCACTACGGTGATGTGGACGAAGACCTGGACAACCCACCAATCGAAACACTGCAAGAGAAGATTCCAGTAGCAGATATCAAAGGCTTGCTGACAGGAAAAGACTGTCCTCACATGAAGGAGAACAAAGGCAAACAGAACAAGGAGGCGCTGGACCTGGCATTTAGCATCACATATGATGTAGAAGAGTACAGCCTGAACTTCATCGCCCCCTCCAGAACTGATTTCTGCCTGTGGACAGATGGACTGAACGTTCTCCTGGGCCGCGAGATGAGCAGTGAATCCATGCGCAGCGAGCTGGAGATCCTGCTCTCCATGGAGATTAAGCTCCGCCTCCTGGACCTCGAGAACGTTTCCATACCCGACAGCGCGCCGGTCGTTCCCAAACCACCCAGCAACTACAACTTCTGCTACGACTTCAGCCAGACCGAGCAGTAGAGTGCGTGCACTCGCTGTAGTGCAAGTAGGCCGTGtgaatgtgtaaatatatattgtgtgtgtgtgtgtgtgtgtgtggggatgtCTGAAATAAGAGGCCTGTGTGTATGGTGAAACCTGACGTGTGCATCCATGCACTTATTCCTATAACACAGATTTATAACAATATTTGTTCTTCATGGTCTTCTACATCCAAGTGAGACAGTTGAACAGGAGAAAACCTGTGGAAACTACACTAGTGTTTGTGGGGGTAATCTGCTACCAAATGGCTGTCGACTGTACTAAATGCTGCAGAGAAATATCTCCAGTTGGTCCCTCCATTCATGATTTCTCCTCACAGCACTACAAACTTTTAACACAGCTCCAAAAACCACAAAA
>XM_039808368.1
tcttctgcTGAGTTAAGAAAGGGAAATGTCAAACAGCCTCAACATTTTTACTGACCAGCATCTTTTCGGTTGAGTCTCATGAGCTGAGGTGTACAGCAAGCTAAGGCTAGAGAGTGGTGGAGTCGAGAGGTGCCAACATGCCTCAACAGAAGGACATAGTAAAGATAGCCATCCAGATGCCTGGGGCCTACCCCCAGCTCATACAACTGGACCAGaAAAAGCCCCTGTCTGCTGTAATAAAGGAAGTGTGTGATGGctggaaTCTCCCAGGTCCTGAAAACTACGCTCTGCAGTATGCTGATGGAGTGCAGATGTACATCACTGAATCGaATCGTCTGGACATTAAGAACGGCTGCATTCTGCGTCTGACCAAGGCACCGGGTCGCTGTGCAGAAGACTTGTACAAGGGCATCCAGAGCTCAGACGCGGGCGTTCGCTGCGATTCGCTGAAGGAACTGGCGAGCGTTTCCACAGACGTGACCTTTGCTCAGGAGTTCATCAGCCGAGACGGACACCTCTTATTGGTCAAGATAGTAGAGGACTGTAATGAGAGTAATGTGATCATGACCCACACACTGACAGGCTTCATGGAACTGATGGATCATGGGATAGTTTCATGGGAAAACCTCTCGTCTGTCTTCATCAAGAAGATTGCTAGCTTTGTCAACGCAAAGCCGACCGATGCATCAATACAGCAGGTGTCCTTGGACATCCTGGAGAGCATGGTGCTGAGCAGCTCCAACCTCTTCCTGCAAGTCAAACTGGAAGTCACTATGGAAAGGCTCATCGCTCACCTCCAGGTGACGAATCAGCAGATACAGACCAAAGCCATGGCCCTATTAATGGCACTACTACAAACAGCCGCtgactcagacagacagGATATGTTTGCATTCCTGAATAAGAAGAATCTCCGTCAGTACATCTATAAGAACATCATCCATAGTTCTGGTTCCGTCCAGGACGAGATGGCCCACTACCTCTATGTCCTACAGTCAGTTACCTTAAATCACCTGGAGCCTCGCATGAGGACGCCTCTGGACTGTTACAGCCAGGAGCAGAGAGACATCCTTCACGGTTTGCGGCAGGCAGCGTTTGAGACCGAAAGCGACAACAGCCTGAGCCACGAGAGACGACGCTCGCTCTGCGCCAAAGAGTTCAAGAAGTTAGGCTTCTCTAACAATAGTAACCCTGGTCAGGACTTGGTGCGAACGCCTCCTGGTCTTCTAGCTTTGGACACCATGTATTATTTTGCTGCACGCTATCCTGATGCCTACAGCAGGTTTGTCCTGGAGAATAGCAGTAGAGAAGACAAACATGAGTGTCCATTTGCCAGGAGCAGCATCCAGCTCACACTCATCCTGTGTGAAATCCTTCGTATCGGAGAGCCCCCCTCAGAGACGAGATCTGACTACCACCCCATCTTCTTCAGTCAGGATCGGCTGATGGAGGAGCTGTTCTGTGTCTGCATCCAGCTGCTCAACAAGACCTGGAAAGAGATGAGAGCCACACAGGAGGACTTTGACAAGGTGATGCAGGTGGTGAGGGAGCAGATAACCAGGACACTGTCCAGTAAGCCCACCTCCCTGGAGCTCTTCAAGAACAAAGTCAACGCACTCAACTACAGCGAGATCCTCAAACTGCGGCAGACAGAACGGCTGCACCAGGAAGAGACTCTGGCTCCGCCCGTACTtgAGCTCAAAGAGCGCCTGAAGCCAGAGCTGCTGGAGTTGATCCGCCAGCAGAGACTCAACAGGCTGTGTCAAGGAACAATGTTCAAGAAGATTAGCAGCCGACGCAGACAGGatAAACTGTGGTACTGCCGCTTGTCGCCCAATCACAAAATGCTTCACTACGGTGATGTGGACGAAGACCTGGACAACCCACCAATCGAAACACTGCAAGAGAAGATTCCAGTAGCAGATATCAAAGGCTTGCTGACAGGAAAAGACTGTCCTCACATGAAGGAGAACAAAGGCAAACAGAACAAGGAGGCGCTGGACCTGGCATTTAGCATCACATATGATGTAGAAGAGTACAGCCTGAACTTCATCGCCCCCTCCAGAACTGATTTCTGCCTGTGGACAGATGGACTGAACGTTCTCCTGGGCCGCGAGATGAGCAGTGAATCCATGCGCAGCGAGCTGGAGATCCTGCTCTCCATGGAGATTAAGCTCCGCCTCCTGGACCTCGAGAACGTTTCCATACCCGACAGCGCGCCGGTCGTTCCCAAACCACCCAGCAACTACAACTTCTGCTACGACTTCAGCCAGACCGAGCAGTAGAGTGCGTGCACTCGCTGTAGTGCAAGTAGGCCGTGtgaatgtgtaaatatatattgtgtgtgtgtgtgtgtgtgtgtggggatgtCTGAAATAAGAGGCCTGTGTGTATGGTGAAACCTGACGTGTGCATCCATGCACTTATTCCTATAACACAGATTTATAACAATATTTGTTCTTCATGGTCTTCTACATCCAAGTGAGACAGTTGAACAGGAGAAAACCTGTGGAAACTACACTAGTGTTTGTGGGGGTAATCTGCTACCAAATGGCTGTCGACTGTACTAAATGCTGCAGAGAAATATCTCCAGTTGGTCCCTCCATTCATGATTTCTCCTCACAGCACTACAAACTTTTAACACAGCTCCAAAAACCACAAAA
>XM_039808369.1
CTGTTTACAAAACACCCAAAGGCCTGCACCTCTGCTGTCATGTAGGTTATCTCTGGCTCTCTTTCACCGCTTGTCATCCCCGTCACTCTTCTCTGATTGTTAACTGCGGGTGGAGTTCAAATTTGGGATTTAAATATCTGTCAAAATAGTCTGCCCTGAAGGAATAAAAGATGGAGGTGATGCAGGTGGTGAGGGAGCAGATAACCAGGACACTGTCCAGTAAGCCCACCTCCCTGGAGCTCTTCAAGAACAAAGTCAACGCACTCAACTACAGCGAGATCCTCAAACTGCGGCAGACAGAACGGCTGCACCAGGAAGAGACTCTGGCTCCGCCCGTACTtgAGCTCAAAGAGCGCCTGAAGCCAGAGCTGCTGGAGTTGATCCGCCAGCAGAGACTCAACAGGCTGTGTCAAGGAACAATGTTCAAGAAGATTAGCAGCCGACGCAGACAGGatAAACTGTGGTACTGCCGCTTGTCGCCCAATCACAAAATGCTTCACTACGGTGATGTGGACGAAGACCTGGACAACCCACCAATCGAAACACTGCAAGAGAAGATTCCAGTAGCAGATATCAAAGGCTTGCTGACAGGAAAAGACTGTCCTCACATGAAGGAGAACAAAGGCAAACAGAACAAGGAGGCGCTGGACCTGGCATTTAGCATCACATATGATGTAGAAGAGTACAGCCTGAACTTCATCGCCCCCTCCAGAACTGATTTCTGCCTGTGGACAGATGGACTGAACGTTCTCCTGGGCCGCGAGATGAGCAGTGAATCCATGCGCAGCGAGCTGGAGATCCTGCTCTCCATGGAGATTAAGCTCCGCCTCCTGGACCTCGAGAACGTTTCCATACCCGACAGCGCGCCGGTCGTTCCCAAACCACCCAGCAACTACAACTTCTGCTACGACTTCAGCCAGACCGAGCAGTAGAGTGCGTGCACTCGCTGTAGTGCAAGTAGGCCGTGtgaatgtgtaaatatatattgtgtgtgtgtgtgtgtgtgtgtggggatgtCTGAAATAAGAGGCCTGTGTGTATGGTGAAACCTGACGTGTGCATCCATGCACTTATTCCTATAACACAGATTTATAACAATATTTGTTCTTCATGGTCTTCTACATCCAAGTGAGACAGTTGAACAGGAGAAAACCTGTGGAAACTACACTAGTGTTTGTGGGGGTAATCTGCTACCAAATGGCTGTCGACTGTACTAAATGCTGCAGAGAAATATCTCCAGTTGGTCCCTCCATTCATGATTTCTCCTCACAGCACTACAAACTTTTAACACAGCTCCAAAAACCACAAAA
>XM_039808370.1
AGGGGGAGGTTCATGTGATTAGACAGTGTGAACCAGGAGGGAGTCTTTGACTTTAAACTGATAATAGAAGTAGGCGGGAAAACACATGAATGGAGCAGAGGTGCGTGTGGGTGTGGCTTAGAAGGAGTAATGCATGAAAGAGTGGAGGCGAGGAAGGGAATTACTCTTCCTGATTGAACACCCAGCAAGCTCCACGtgttatctatctatccatgGACCATGTTCTGGCCTACTGGAGCATTTTCTTCATGTGGGTTTTAAAGCTCAAAGGTGATGCAGGTGGTGAGGGAGCAGATAACCAGGACACTGTCCAGTAAGCCCACCTCCCTGGAGCTCTTCAAGAACAAAGTCAACGCACTCAACTACAGCGAGATCCTCAAACTGCGGCAGACAGAACGGCTGCACCAGGAAGAGACTCTGGCTCCGCCCGTACTtgAGCTCAAAGAGCGCCTGAAGCCAGAGCTGCTGGAGTTGATCCGCCAGCAGAGACTCAACAGGCTGTGTCAAGGAACAATGTTCAAGAAGATTAGCAGCCGACGCAGACAGGatAAACTGTGGTACTGCCGCTTGTCGCCCAATCACAAAATGCTTCACTACGGTGATGTGGACGAAGACCTGGACAACCCACCAATCGAAACACTGCAAGAGAAGATTCCAGTAGCAGATATCAAAGGCTTGCTGACAGGAAAAGACTGTCCTCACATGAAGGAGAACAAAGGCAAACAGAACAAGGAGGCGCTGGACCTGGCATTTAGCATCACATATGATGTAGAAGAGTACAGCCTGAACTTCATCGCCCCCTCCAGAACTGATTTCTGCCTGTGGACAGATGGACTGAACGTTCTCCTGGGCCGCGAGATGAGCAGTGAATCCATGCGCAGCGAGCTGGAGATCCTGCTCTCCATGGAGATTAAGCTCCGCCTCCTGGACCTCGAGAACGTTTCCATACCCGACAGCGCGCCGGTCGTTCCCAAACCACCCAGCAACTACAACTTCTGCTACGACTTCAGCCAGACCGAGCAGTAGAGTGCGTGCACTCGCTGTAGTGCAAGTAGGCCGTGtgaatgtgtaaatatatattgtgtgtgtgtgtgtgtgtgtgtggggatgtCTGAAATAAGAGGCCTGTGTGTATGGTGAAACCTGACGTGTGCATCCATGCACTTATTCCTATAACACAGATTTATAACAATATTTGTTCTTCATGGTCTTCTACATCCAAGTGAGACAGTTGAACAGGAGAAAACCTGTGGAAACTACACTAGTGTTTGTGGGGGTAATCTGCTACCAAATGGCTGTCGACTGTACTAAATGCTGCAGAGAAATATCTCCAGTTGGTCCCTCCATTCATGATTTCTCCTCACAGCACTACAAACTTTTAACACAGCTCCAAAAACCACAAAA

Function

symbol description
elmo3 Predicted to enable SH3 domain binding activity. Predicted to be involved in actin filament organization and cell motility. Predicted to act upstream of or within apoptotic process; cell migration; and phagocytosis. Predicted to be located in cytoplasm. Is expressed in immature eye; nervous system; neural plate; neural tube; and pharyngeal arch 3-7 skeleton. Orthologous to human ELMO3 (engulfment and cell motility 3).

NR:

description
PREDICTED: engulfment and cell motility protein 3 isoform X1

GO:

id name namespace
GO:0006909 phagocytosis biological_process
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K19241 ELMO3; engulfment and cell motility protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808367.1 True 2800 mRNA 0.50 21 36684992 36713691
XM_039808368.1 False 2663 mRNA 0.50 21 36684992 36711255
XM_039808369.1 False 1310 mRNA 0.49 7 36684992 36691287
XM_039808370.1 False 1404 mRNA 0.49 7 36684992 36689927

Neighbor

gene id symbol gene type direction distance location
rspry1 rspry1 coding downstream 172694 36497369 ~ 36512298 (-)
LOC120564168 arl2bp coding downstream 189960 36485748 ~ 36495032 (-)
LOC120563930 aars,LOC102788534 coding downstream 255883 36394437 ~ 36429109 (-)
sf3b3 sf3b3 coding downstream 374272 36279469 ~ 36310720 (-)
il34 il34 coding downstream 466298 36160990 ~ 36218694 (-)
e2f4 e2f4 coding upstream 2369 36716060 ~ 36725583 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding upstream 145304 36858995 ~ 36880639 (-)
mlycd mlycd coding upstream 1037882 37751573 ~ 37768051 (-)
LOC120563886 LOC104944047 coding upstream 1737646 38451337 ~ 38500027 (-)
bida NA coding upstream 1835902 38549593 ~ 38555756 (-)
G90422 LOC103466852 non-coding downstream 36305 36636576 ~ 36648687 (-)
G90360 NA non-coding downstream 153000 36530971 ~ 36531992 (-)
G90181 NA non-coding downstream 576731 36106593 ~ 36108261 (-)
G90144 NA non-coding downstream 890746 35794030 ~ 35794246 (-)
G90139 NA non-coding downstream 913719 35770972 ~ 35771273 (-)
LOC120563961 NA non-coding upstream 75098 36788789 ~ 36831578 (-)
LOC120563667 NA non-coding upstream 371436 37085127 ~ 37088496 (-)
G90489 NA non-coding upstream 385203 37098894 ~ 37099191 (-)
G90491 NA non-coding upstream 405364 37119055 ~ 37119267 (-)
G90495 NA non-coding upstream 420421 37134112 ~ 37134539 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 163029 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 167065 36512962 ~ 36517927 (-)
G90150 NA other downstream 817681 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 1513309 35144389 ~ 35171683 (-)
G89928 NA other downstream 2006891 34676243 ~ 34678101 (-)
tigara NA other upstream 129862 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 1096663 37810354 ~ 37815552 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 1728176 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 1803488 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 2947877 39661568 ~ 39680139 (-)

Expression


Co-expression Network