G90422 (LOC103466852)


Basic Information

Item Value
gene id G90422
gene name LOC103466852
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36636576 ~ 36648687 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121693
CTTCGATATGACATAATTCACACAGGAGTCAAAAGCGCAAGAATCTGTGAAAGCCATGCAAAAGCAAACAGAacatcacaacaacacaaaacaagacaCACAAAGCACTTTGTTTCCACAATGATTCACATGACAAACTGTGTTCTGCATAAACACTATGTGGCTCTTCCTGTCGTTTATGTGCAGAAAAGATTTCTTAACCTTGGGACCAAATTGAAAGAAATTTCAGATTTTCCTAAGCAACAGGTAACATGGTTTCTGCAGAACACGGACATACAGCAGACAGACATTAGCAGACATTAGAGGGCAGTAGATCCATGTCAAACAGCACTAAACAGAGGGGAACGTGAAGAGTTTTAATCCAAAATGATACATTTCATGATTCATTAAAACCATCAATGGCGATAAAATATAATCACTGAAACTATTTGGATTTTATGAGCAAGTATTTGTTAATCTAAAATCTTCtaaatttttatgtttttttttttttttttgccagctaaCACTATTTAATTTGAtcagattttttgataaaaACACTCCACTTGCCAACAGAGAACATAACCCAAAACATATCCTAGGGATGTTACTTTGGGTTTTTTGTATGAATAAAAGCTATGCATATGTGTTGTTTCATATGGAGAAAAAGAATAATGAAATTACAAATTGCACTACAACTCAAACAATCCATGCAGTTTTCTTACTCTTTATCTCCTTTACTTTGACGAGCCACGGACGGGGTCACAGGGACAGTGAGAGTGGTAAGTTTGGGGTCCTGGGTGGTGAGAATTTGGGGGATATTGCTCTGTTCCTccgctcttcctcctcttcctcctcctcctcttgctcctcCTGTCCCTCCCTTCTCATGATCTGAGTCGACATCTTCTACATTGACAGCCGGACGAAGGCTGAGGCCAGAGCTCTCACCGCGGCCGTCCCCAGTAGCTTCCTCCTcTTTTTCACCAGCTTTGACAGTGTTGGTGCTTTGACCGCCTTCCTCTGCTTTCTGCGGCTGCTGGGTAACAGGCTCAGCTTCTGATTTGGCTTTCTGGGTCTTGGtctctggctctggctctggctctggttctggttctggttctggttctggttctggctctggctctgacTCAGAGATCTTAACTGGTTCAGGACTTGGAGGTGGAGAGGGGGAGGTCCGCTGTGGCTCTGCTTCCTCCTTTGGTtCTGGTTCCTTAATGGTGTGTTCCTCAGTCTCCTCAGCAAGGCTTTCTTTTCCTGTGACTTCACTGTGATCAATTTcgctcttctcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttgtggcATTGGCAGCTCAGTGTcaggctcctcttcctccagcaGTTCTTGACTCCCCAGTGAGAGTCTGATGGACTGTCCCTCACAGGCCTGTCTAATGGTCATctcagctgtctgtctggccACCTCTTCAGCCATACGTGCCATCTCCGTACGCTCCTGCAGCAGACGTTCCTCCATGGTAGCCAAAGCTACACCTTCAGCCTCCTTCTTGATGTTTTCAATGAATGGCGTCCAGCGGCCTGTCTGGGTCTCAGCATCTTCTTGAGATTTTGTCCCACTCTCATGTGACGGCTCTGGCTTTGAGTTGGCGTCATTACACTTCTGAGACTGCTCTGAATTGGGATGTGTCTGCTGCATCGCTTTCTGCTGTTGGTTTGCTGTCGGTGCCGGTGGAGTCAGCGATGGGGACGGTGCTCCAGCTTTGGAGTGATATTTAAGGTTCTGCTGGCCCTCGTTGTCTGAGTCCACGTCTTCTAGTACCATGTCAGGTTTGAGTTTGGATGAAGCTTTCTGTAGAACTTCAGGTGCACcCTCAGCATCATCTTTGGCTTGAATGGCG

Function

NR:

description
PREDICTED: cyclic nucleotide-gated cation channel beta-3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121693 True 1901 lncRNA 0.46 10 36636576 36648687

Neighbor

gene id symbol gene type direction distance location
rspry1 rspry1 coding downstream 124278 36497369 ~ 36512298 (-)
LOC120564168 arl2bp coding downstream 141544 36485748 ~ 36495032 (-)
LOC120563930 aars,LOC102788534 coding downstream 207467 36394437 ~ 36429109 (-)
sf3b3 sf3b3 coding downstream 325856 36279469 ~ 36310720 (-)
il34 il34 coding downstream 417882 36160990 ~ 36218694 (-)
elmo3 elmo3,LOC100697255,LOC103379556 coding upstream 36305 36684992 ~ 36713691 (-)
e2f4 e2f4 coding upstream 67373 36716060 ~ 36725583 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding upstream 210308 36858995 ~ 36880639 (-)
mlycd mlycd coding upstream 1102886 37751573 ~ 37768051 (-)
LOC120563886 LOC104944047 coding upstream 1802650 38451337 ~ 38500027 (-)
G90360 NA non-coding downstream 104584 36530971 ~ 36531992 (-)
G90181 NA non-coding downstream 528315 36106593 ~ 36108261 (-)
G90144 NA non-coding downstream 842330 35794030 ~ 35794246 (-)
G90139 NA non-coding downstream 865303 35770972 ~ 35771273 (-)
G90137 NA non-coding downstream 866401 35769910 ~ 35770175 (-)
LOC120563961 NA non-coding upstream 140102 36788789 ~ 36831578 (-)
LOC120563667 NA non-coding upstream 436440 37085127 ~ 37088496 (-)
G90489 NA non-coding upstream 450207 37098894 ~ 37099191 (-)
G90491 NA non-coding upstream 470368 37119055 ~ 37119267 (-)
G90495 NA non-coding upstream 485425 37134112 ~ 37134539 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 114613 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 118649 36512962 ~ 36517927 (-)
G90150 NA other downstream 769265 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 1464893 35144389 ~ 35171683 (-)
G89928 NA other downstream 1958475 34676243 ~ 34678101 (-)
tigara NA other upstream 194866 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 1161667 37810354 ~ 37815552 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 1793180 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 1868492 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 3012881 39661568 ~ 39680139 (-)

Expression


Co-expression Network