G90489


Basic Information

Item Value
gene id G90489
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 37098894 ~ 37099191 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU121769
aacagaaaacactgttcacaaactgctccaaacagctctattgtagtccagcctttacttcagagacaaacgtgggtcactttgtaacacgttataatgctcgcctagctgctagcatggcacgccctcatactctgcttctgattggctagtagtccttacctaggtactgcacatgtgcgactcccaacaaagatggaacagaagtgagatgcctcactctgtagctaaaacggagagctcaacacacagggtgaaaagaggagctgcagcaatgtgcagtacaacaaaaatatgg

Function

NR:

description
PREDICTED: CREB-regulated transcription coactivator 2-like isoform X2

GO:

id name namespace
GO:0019787 ubiquitin-like protein transferase activity molecular_function
GO:0019789 SUMO transferase activity molecular_function

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis
ko04144 Endocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU121769 True 298 lncRNA 0.46 1 37098894 37099191

Neighbor

gene id symbol gene type direction distance location
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding downstream 218255 36858995 ~ 36880639 (-)
e2f4 e2f4 coding downstream 373311 36716060 ~ 36725583 (-)
elmo3 elmo3,LOC100697255,LOC103379556 coding downstream 385203 36684992 ~ 36713691 (-)
rspry1 rspry1 coding downstream 586596 36497369 ~ 36512298 (-)
LOC120564168 arl2bp coding downstream 603862 36485748 ~ 36495032 (-)
mlycd mlycd coding upstream 652382 37751573 ~ 37768051 (-)
LOC120563886 LOC104944047 coding upstream 1352146 38451337 ~ 38500027 (-)
bida NA coding upstream 1450402 38549593 ~ 38555756 (-)
wee2 wee2,LOC102782747 coding upstream 1457810 38557001 ~ 38562972 (-)
agk agk coding upstream 1476148 38575339 ~ 38582534 (-)
LOC120563667 NA non-coding downstream 10398 37085127 ~ 37088496 (-)
G90363 NA non-coding downstream 185080 36448646 ~ 36913814 (-)
LOC120563961 NA non-coding downstream 267316 36788789 ~ 36831578 (-)
G90422 LOC103466852 non-coding downstream 450207 36636576 ~ 36648687 (-)
G90360 NA non-coding downstream 566902 36530971 ~ 36531992 (-)
G90491 NA non-coding upstream 19864 37119055 ~ 37119267 (-)
G90495 NA non-coding upstream 34921 37134112 ~ 37134539 (-)
LOC120564494 NA non-coding upstream 464805 37563996 ~ 37574129 (-)
G90524 NA non-coding upstream 598574 37697765 ~ 37697977 (-)
G90532 NA non-coding upstream 614418 37713609 ~ 37714090 (-)
tigara NA other downstream 246253 36843553 ~ 36852641 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 576931 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 580967 36512962 ~ 36517927 (-)
G90150 NA other downstream 1231583 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 1927211 35144389 ~ 35171683 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 711163 37810354 ~ 37815552 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 1342676 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 1417988 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 2562377 39661568 ~ 39680139 (-)
G91022 bcar1 other upstream 2581594 39680785 ~ 39687012 (-)

Expression


Co-expression Network