e2f4 (e2f4)


Basic Information

Item Value
gene id e2f4
gene name e2f4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 36716060 ~ 36725583 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039808510.1
CTGCTGTACCCAACAATGCGTTGTTGCAGGGCATTGAACCCGTTGGTACAGAGCTACAGCGGTTTCCCTTTGTCGGCTGCAGACACGTTGGCGGTGCGACAGAAACGACGTATCTATGATATCACTAATGTTTTGGAGGGAATTGGACTGATCGAGAAGAAGTCCAAGAACAGCATCCAGTGGAAGGGTGTAGGTCCAGGATGTAACACCAGAGAGATCGCCGATAAGCTAATTGATCTGAAGGCCGAGCTAGATGACCTGGCTCTCAGGGAAAACGAGCTGGACCAGCAGAGAGTCTGGGTCCAGCAGAGCATCAAGAATGTCACTGACGACTCCAACAACAGCCCTATGGCATATATAAAACATGAAGACCTCTGTGGAGCTTTCAAAGGTGACACACTCCTTGCAATCCGGGCTCCCATTGGCACACAACTAGAGGTCCCCATACCAGAAGCTGTCCTCAACGGACAGAGGAAATACCAGATCCGTCTCAAGAGTGCATCTGGGCCCATTGAGGTTTTGCTGGTCAATAAGGACCCATCCAGTGCCTCTCCTGTTGTTTTGCCCGTCCCTCCTCCAGATGACATCCTTCAAAGCCTCCCAGCAACGACGCCTACCTCTCATCCGTCCACTGCTGCCTCCCAGGTCTCCAAAGCAGCAACGTCTACAAAACCTGGTCCTGCCACGACGTCGGCTCCAGCAGCCAACCAGACTGCCTCACTGACAGaagtgACAAGCACCACGCCACTCACCCCAATAACAGATACACCTGCTGCAGTTACCCAGCAACTACAGTCTTCTGCCTCGTTGGATGGGTCTGCGTCTTCATCTGCCTCTGCAGTATTTGAACCAATGAAGTCAAATCCCTCTGAATTGCTGGACTTCCCCAAAGAGCTCTCTGAAATGTTTGATCCAACAAAAGAGATCATGAGTGGAGACCTTTTGGAAGACTTGATGTCATCAGAAGTGTTCTCGCCTCTCCTGCGTCTGTCCCCTCCACCCAGCGACCACGACTACATATACAACCTGGATGAGACAGAAGGCCTTTGTGACCTCTTTGACGTCCCCATTCTCAACCTCTGACCCCTGCGACTGTTGTCAGAGTGAGAAAAGGTTCCCCAAACGTGCTTATCTACCTTCATTTTCTCCACGTTTTTGAAGGTGAGAAGAGGTGCAAGAAAGCCAACATGATCTGAAGAGCGTTGACGGACATCTCTGCACTGACACGGTGAGCTCAGCCGGAGCTCCGTCAGACAGTAGCTCCGTGTACAGCCTCTTGAGGGAATACAGGCTAGaacaaaacattttacacaCTGCTTTTCCAAGGACACAAAGtcaaaagaaatgacaaataattatattttttagatTGTTATGTAAAGTGTTTGTGTATCAGCTTTCCTGTGTGCTTGTGAGCGAACGTGAGTAGGCAATACTTTGcttgtgcgtctgtgtgtgcgcttgaGTTTTGTATTGAACCCTTTTTTTAACTTGAGgcagaggtgggggggggggagagaaaagagaaagcctTTTCCTATCAGGTAAATAGTCATTGCGTTAAGAGACCAGTCTTTGTCACCCAGCAGCTGCTCGCGCATGGCTTGAATGAGTCCAAACACAGCTGGTTAAATATGCACTGTCCTCATGTACATAgagaatatatattttgtattaccAGCACCCAAGACTATTGTTTAATAATTAACTGCATTTGTAACCCAGGCAGAGCAATAGTTTGCaaataaacaaactaaataaataaataaataataaaggttCCAGACTCATATAATCACATTGTATGAATGAAGTGATTTGTTTCAGATAATAGGAATTGGTCTTAATCAAACCTCTCAGTGTTGGAAGTATTTTTTGTGAACCAGTTAGAGAAAGAGGATCCTATTGTTGAGTAACTGAAACCAATTGATGTTGTGACATAAAGAGCCAAGGACCAAAACAATGcattgggggagggggggggggcccttAAAAAGGAATTCTACCTTTTTACATGGAACACATTTTAGGTCAACaatagggctgtgtattggcaagaatctggcgatgcgatacgtatcacgatacacgGGTCATGATTCaatatatcacaatatatttcaatatattggg
>XM_039808511.1
CTGCTGTACCCAACAATGCGTTGTTGCAGGGCATTGAACCCGTTGGTACAGAGCTACAGCGGTTTCCCTTTGTCGGCTGCAGACACGTTGGCGGTGCGACAGAAACGACGTATCTATGATATCACTAATGTTTTGGAGGGAATTGGACTGATCGAGAAGAAGTCCAAGAACAGCATCCAGTGGAAGGGTGTAGGTCCAGGATGTAACACCAGAGAGATCGCCGATAAGCTAATTGATCTGAAGGCCGAGCTAGATGACCTGGCTCTCAGGGAAAACGAGCTGGACCAGCAGAGAGTCTGGGTCCAGCAGAGCATCAAGAATGTCACTGACGACTCCAACAACAGCCCTATGGCATATATAAAACATGAAGACCTCTGTGGAGCTTTCAAAGGTGACACACTCCTTGCAATCCGGGCTCCCATTGGCACACAACTAGAGGTCCCCATACCAGAAGCTGTCCTCAACGGACAGAGGAAATACCAGATCCGTCTCAAGAGTGCATCTGGGCCCATTGAGGTTTTGCTGGTCAATAAGGACCCATCCAGTGCCTCTCCTGTTGTTTTGCCCGTCCCTCCTCCAGATGACATCCTTCAAAGCCTCCCAGCAACGACGCCTACCTCTCATCCGTCCACTGCTGCCTCCCAGGTCTCCAAAGCAGCAACGTCTACAAAACCTGGTCCTGCCACGACGTCGGCTCCAGCAGCCAACCAGACTGCCTCACTGACAGATACACCTGCTGCAGTTACCCAGCAACTACAGTCTTCTGCCTCGTTGGATGGGTCTGCGTCTTCATCTGCCTCTGCAGTATTTGAACCAATGAAGTCAAATCCCTCTGAATTGCTGGACTTCCCCAAAGAGCTCTCTGAAATGTTTGATCCAACAAAAGAGATCATGAGTGGAGACCTTTTGGAAGACTTGATGTCATCAGAAGTGTTCTCGCCTCTCCTGCGTCTGTCCCCTCCACCCAGCGACCACGACTACATATACAACCTGGATGAGACAGAAGGCCTTTGTGACCTCTTTGACGTCCCCATTCTCAACCTCTGACCCCTGCGACTGTTGTCAGAGTGAGAAAAGGTTCCCCAAACGTGCTTATCTACCTTCATTTTCTCCACGTTTTTGAAGGTGAGAAGAGGTGCAAGAAAGCCAACATGATCTGAAGAGCGTTGACGGACATCTCTGCACTGACACGGTGAGCTCAGCCGGAGCTCCGTCAGACAGTAGCTCCGTGTACAGCCTCTTGAGGGAATACAGGCTAGaacaaaacattttacacaCTGCTTTTCCAAGGACACAAAGtcaaaagaaatgacaaataattatattttttagatTGTTATGTAAAGTGTTTGTGTATCAGCTTTCCTGTGTGCTTGTGAGCGAACGTGAGTAGGCAATACTTTGcttgtgcgtctgtgtgtgcgcttgaGTTTTGTATTGAACCCTTTTTTTAACTTGAGgcagaggtgggggggggggagagaaaagagaaagcctTTTCCTATCAGGTAAATAGTCATTGCGTTAAGAGACCAGTCTTTGTCACCCAGCAGCTGCTCGCGCATGGCTTGAATGAGTCCAAACACAGCTGGTTAAATATGCACTGTCCTCATGTACATAgagaatatatattttgtattaccAGCACCCAAGACTATTGTTTAATAATTAACTGCATTTGTAACCCAGGCAGAGCAATAGTTTGCaaataaacaaactaaataaataaataaataataaaggttCCAGACTCATATAATCACATTGTATGAATGAAGTGATTTGTTTCAGATAATAGGAATTGGTCTTAATCAAACCTCTCAGTGTTGGAAGTATTTTTTGTGAACCAGTTAGAGAAAGAGGATCCTATTGTTGAGTAACTGAAACCAATTGATGTTGTGACATAAAGAGCCAAGGACCAAAACAATGcattgggggagggggggggggcccttAAAAAGGAATTCTACCTTTTTACATGGAACACATTTTAGGTCAACaatagggctgtgtattggcaagaatctggcgatgcgatacgtatcacgatacacgGGTCATGATTCaatatatcacaatatatttcaatatattggga

Function

symbol description
e2f4 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within mitotic cell cycle and regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Is expressed in adenohypophysis; head; and trunk. Orthologous to human E2F4 (E2F transcription factor 4).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0000278 mitotic cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K04682 E2F4_5; transcription factor E2F4/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039808510.1 True 2133 mRNA 0.46 11 36716061 36725583
XM_039808511.1 False 2098 mRNA 0.46 11 36716060 36725583

Neighbor

gene id symbol gene type direction distance location
elmo3 elmo3,LOC100697255,LOC103379556 coding downstream 2369 36684992 ~ 36713691 (-)
rspry1 rspry1 coding downstream 203762 36497369 ~ 36512298 (-)
LOC120564168 arl2bp coding downstream 221028 36485748 ~ 36495032 (-)
LOC120563930 aars,LOC102788534 coding downstream 286951 36394437 ~ 36429109 (-)
sf3b3 sf3b3 coding downstream 405340 36279469 ~ 36310720 (-)
ccnd2a ccnd2,LOC104922121,LOC107389327,LOC103376074,LOC100698323,LOC102786071 coding upstream 133412 36858995 ~ 36880639 (-)
mlycd mlycd coding upstream 1025990 37751573 ~ 37768051 (-)
LOC120563886 LOC104944047 coding upstream 1725754 38451337 ~ 38500027 (-)
bida NA coding upstream 1824010 38549593 ~ 38555756 (-)
wee2 wee2,LOC102782747 coding upstream 1831418 38557001 ~ 38562972 (-)
G90422 LOC103466852 non-coding downstream 67373 36636576 ~ 36648687 (-)
G90360 NA non-coding downstream 184068 36530971 ~ 36531992 (-)
G90181 NA non-coding downstream 607799 36106593 ~ 36108261 (-)
G90144 NA non-coding downstream 921814 35794030 ~ 35794246 (-)
G90139 NA non-coding downstream 944787 35770972 ~ 35771273 (-)
LOC120563961 NA non-coding upstream 63206 36788789 ~ 36831578 (-)
LOC120563667 NA non-coding upstream 359544 37085127 ~ 37088496 (-)
G90489 NA non-coding upstream 373311 37098894 ~ 37099191 (-)
G90491 NA non-coding upstream 393472 37119055 ~ 37119267 (-)
G90495 NA non-coding upstream 408529 37134112 ~ 37134539 (-)
LOC120564801 LOC100696185,LOC103368973 other downstream 194097 36518240 ~ 36521963 (-)
G90380 anapc13 other downstream 198133 36512962 ~ 36517927 (-)
G90150 NA other downstream 848749 35867013 ~ 35867311 (-)
G90055 LOC105899468,LOC106591119,LOC106564289,LOC106564211,LOC106594866,LOC106597831 other downstream 1544377 35144389 ~ 35171683 (-)
G89928 NA other downstream 2037959 34676243 ~ 34678101 (-)
tigara NA other upstream 117970 36843553 ~ 36852641 (-)
hsbp1b hsbp1,LOC102784925,LOC102222837 other upstream 1084771 37810354 ~ 37815552 (-)
ada2a LOC106537066,LOC104941801,LOC101155598 other upstream 1716284 38441867 ~ 38449275 (-)
atp6v1e1a LOC103365022,LOC103380037 other upstream 1791596 38517179 ~ 38528723 (-)
G91021 bcar1 other upstream 2935985 39661568 ~ 39680139 (-)

Expression


Co-expression Network