LOC120565760


Basic Information

Item Value
gene id LOC120565760
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 27685907 ~ 27687810 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005640281.1
CAATGCAGCCAGGCATCCTGTTAAAGTCAACTGGAAGCGGAGCATCACCCACTCATTTCTGTAATTTCGCTCTCTGTGACCAGAACAGAGCAAGACACACCAATAAAGCATGGAGACATTACATGATGACCTCTTCTTGGGCCCGCCTCttgccacacatacacacccactgTCTACAGATGTGCACATTTGTGGTGAAAGGATGTTATCAGTTTATTACAGGAGgatccagtgatgtatggCATACCGTAAATTCTCGCTGCTCGGTTATTAAAAGTCATTGATGCGGGGACACTGAATCATGCAGGGGCAAAGGCCTAGGAGCCGGTCAGTAAACCTGCACAATCAACTCTGCACCACATCCCCCATCAGAATAAATACAGTGGCAGCCTATAGATCAGGATGATGGTACCATATGTGTAGTGCCACGAGTTCACTCCAGCCATATAGGCATGTAggcatgtttattttttgtaggATTACAGAGAAGGGTGTAGTGAAAAGTCTATTCTATGGTTCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005640281.1 True 523 lncRNA 0.46 3 27685907 27687810

Neighbor

gene id symbol gene type direction distance location
borcs8 borcs8 coding downstream 72582 27607635 ~ 27613325 (-)
yjefn3 yjefn3 coding downstream 232509 27401601 ~ 27453398 (-)
si:ch211-212d10.1 NA coding downstream 335535 27345522 ~ 27350372 (-)
LOC120566144 NA coding downstream 347058 27336259 ~ 27338849 (-)
LOC120566145 NA coding downstream 352549 27324806 ~ 27333358 (-)
hapln4 hapln4 coding upstream 167857 27855667 ~ 27864994 (-)
tm6sf2 tm6sf2,LOC103370966,LOC101073477 coding upstream 191505 27879315 ~ 27891985 (-)
polr2eb polr2e,polr2eb,LOC107669821 coding upstream 330326 28018136 ~ 28021719 (-)
LOC120564867 LOC105932459,LOC100697758,LOC105903927,LOC103463721,LOC108427173,LOC107095311,LOC103376755,LOC102218510 coding upstream 414676 28102486 ~ 28112239 (-)
fsd1 fsd1,LOC102776272 coding upstream 439471 28127281 ~ 28137246 (-)
G98732 NA non-coding downstream 118163 27528153 ~ 27567744 (-)
G98699 slc25a42,LOC100693853,LOC102776412 non-coding downstream 165569 27516122 ~ 27520338 (-)
G98678 NA non-coding downstream 285133 27399659 ~ 27400774 (-)
G98677 NA non-coding downstream 286562 27398664 ~ 27399345 (-)
G98662 NA non-coding downstream 288954 27396691 ~ 27396953 (-)
G98773 ncan,LOC102799902 non-coding upstream 25323 27713133 ~ 27713358 (-)
G98775 NA non-coding upstream 37794 27725604 ~ 27725830 (-)
G98776 ncan,LOC102799902 non-coding upstream 40624 27728434 ~ 27728665 (-)
G98780 NA non-coding upstream 127946 27815756 ~ 27816586 (-)
G98819 tjp3 non-coding upstream 293777 27981587 ~ 27982524 (-)
LOC120565230 nr2c2ap,LOC102799158 other downstream 67021 27615442 ~ 27618886 (-)
mef2b mef2b,LOC104918762 other downstream 78601 27586440 ~ 27607306 (-)
mau2 mau2,LOC106573592 other downstream 173527 27495307 ~ 27512380 (-)
gatad2ab gatad2a,LOC103371089 other downstream 193950 27456747 ~ 27491957 (-)
cilp2 cilp2 other downstream 289521 27376711 ~ 27396386 (-)
G98777 NA other upstream 41871 27729681 ~ 27730557 (-)
G98781 NA other upstream 137255 27825065 ~ 27828307 (-)
G98938 serbp1,LOC102303841,LOC104930792,LOC105932454,LOC103463733,LOC106917776 other upstream 511552 28199362 ~ 28269725 (-)
LOC120565123 ipo13,LOC103354180,LOC102296374,LOC100704490,LOC101476741,LOC104925999,LOC102781747,LOC102197282 other upstream 913522 28601332 ~ 28637079 (-)
atg4b atg4b,atg4a other upstream 1278596 28966406 ~ 28978444 (-)

Expression


Co-expression Network