G105843


Basic Information

Item Value
gene id G105843
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 18059026 ~ 18059681 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU142136
gggctgtcggcgttcattttgacatgttcggtcggcggcagggaagtcgggactcacccggaaatgaagagcggaatgaggtgactacagtctctctgtaaaatctgatgaaaatcttttaaacagacctttgttgagctgaaatgaagacagattcagcatctgcatggcctatttctcgcttaaaatgttttcagaaacatgtttcagtgaactattttagtacaatatgagatcgtattctgaacggccgccatgacagtctggctctgaatttccggagaaaacaaacccatgtgacgcgttcgtccaatcagctgccggttttaatttcttgggcaacattacagattagcgccacctgttgttatagagatgtattacgtctcgtctcctctcgtctttttggtctgttctgtggcagttttttggacctcggggacgcgactgatcatatcgacggggttttctgtcaacggtcgcccgtcggctatatgtgtctacaccataAGACCCACTATTATTCATTGGCTTTCAATTCAGGTTGAGCTTTGACATCTTGACCTTATTCTTGACCTTATTCTTTTTCTACTGttagttattttgtattgtatattgtgctttgtttgtgtttattatcTCTTTGCTTTTTGGag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142136 True 656 lncRNA 0.43 1 18059026 18059681

Neighbor

gene id symbol gene type direction distance location
ccnjl ccnjl coding upstream 2010 18036219 ~ 18057016 (+)
c1qtnf2 c1qtnf2,LOC104947746,LOC106952501,LOC103135567 coding upstream 23447 18032548 ~ 18035579 (+)
slu7 slu7 coding upstream 28070 18024865 ~ 18030956 (+)
nsd1a LOC103359216,LOC104947748 coding upstream 35089 18008782 ~ 18023937 (+)
si:ch1073-44g3.1 LOC103359217,LOC104947750 coding upstream 51212 18005778 ~ 18007814 (+)
LOC120566284 NA coding downstream 10578 18070259 ~ 18077778 (+)
LOC120567062 NA coding downstream 32089 18091770 ~ 18157410 (+)
LOC120567061 NA coding downstream 101662 18161343 ~ 18167101 (+)
phykpl phykpl coding downstream 334158 18393839 ~ 18398072 (+)
tmem126a LOC100708117 coding downstream 490400 18550081 ~ 18551706 (+)
G105798 NA non-coding upstream 57246 18001435 ~ 18001780 (+)
LOC120567419 NA non-coding upstream 64641 17991618 ~ 17994385 (+)
G105791 NA non-coding upstream 90071 17968750 ~ 17968955 (+)
G105743 LOC102790791,LOC101467139 non-coding upstream 199393 17857110 ~ 17859633 (+)
G105735 NA non-coding upstream 215652 17834719 ~ 17843374 (+)
G105845 NA non-coding downstream 6769 18066450 ~ 18068403 (+)
G105863 NA non-coding downstream 94840 18154521 ~ 18168044 (+)
LOC120567064 NA non-coding downstream 98103 18157784 ~ 18160759 (+)
G105867 NA non-coding downstream 133579 18193260 ~ 18212873 (+)
G105871 NA non-coding downstream 239646 18299327 ~ 18304177 (+)
gabra6a gabra6,LOC102779400,LOC100710435,LOC102294139 other upstream 159295 17890170 ~ 17899731 (+)
G105677 NA other upstream 373327 17682919 ~ 17685699 (+)
LOC120567259 LOC106925651,LOC106940816,LOC108240559,LOC106591805,LOC102211808,LOC100691901,LOC106613062 other upstream 594804 17458247 ~ 17464222 (+)
LOC120566324 LOC107089033,LOC103135614,LOC106925651,LOC106940816 other upstream 698764 17357508 ~ 17360262 (+)
G105542 NA other upstream 907519 17141983 ~ 17151507 (+)
adra2db LOC102798575,LOC100708556,LOC101479598,LOC102300678 other downstream 904253 18963934 ~ 18969946 (+)
G106237 spock1 other downstream 1545159 19604840 ~ 19652474 (+)
LOC120566323 LOC102781894,LOC101481808 other downstream 1969182 20028863 ~ 20061338 (+)
G106465 LOC104955902 other downstream 2292040 20351721 ~ 20352167 (+)
hrh2a LOC103354784,LOC104948895 other downstream 2875048 20934729 ~ 20947415 (+)

Expression


Co-expression Network