Gene
RNA
| Item | Value |
|---|---|
| gene id | G128027 |
| gene name | plcl1,LOC107374039 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 29792610 ~ 29795310 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| plcl1 | Predicted to enable GABA receptor binding activity; inositol 1,4,5 trisphosphate binding activity; and phosphatidylinositol phospholipase C activity. Predicted to be involved in phosphatidylinositol-mediated signaling. Predicted to act upstream of or within intracellular signal transduction; lipid catabolic process; and regulation of GABAergic synaptic transmission. Is expressed in hindbrain; lateral line nerve; and spinal cord. Orthologous to human PLCL1 (phospholipase C like 1 (inactive)). |
| description |
|---|
| PREDICTED: inactive phospholipase C-like protein 1 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU172218 | True | 701 | lncRNA | 0.57 | 2 | 29792610 | 29795310 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rftn2 | rftn2 | coding | downstream | 114444 | 29643664 ~ 29678166 (-) |
| hspd1 | hspd1 | coding | downstream | 166539 | 29615962 ~ 29626071 (-) |
| sf3b1 | sf3b1,LOC100380860 | coding | downstream | 189873 | 29584942 ~ 29602737 (-) |
| ankrd44 | ankrd44,LOC102781020 | coding | downstream | 212396 | 29539342 ~ 29580214 (-) |
| si:dkey-57a22.11 | NA | coding | downstream | 299932 | 29483771 ~ 29492678 (-) |
| satb2 | satb2,LOC103367524 | coding | upstream | 104945 | 29900255 ~ 29964320 (-) |
| dnajb11 | dnajb11 | coding | upstream | 199717 | 29995027 ~ 30005938 (-) |
| lcmt2 | lcmt2 | coding | upstream | 233355 | 30028665 ~ 30045755 (-) |
| dbr1 | LOC107551939,LOC101160048 | coding | upstream | 263857 | 30059167 ~ 30070582 (-) |
| tnfsf11 | LOC104934832 | coding | upstream | 578891 | 30374201 ~ 30387537 (-) |
| G127995 | NA | non-coding | downstream | 177587 | 29612222 ~ 29615023 (-) |
| G128006 | pikfyve,LOC107595854 | non-coding | downstream | 261586 | 29530486 ~ 29531024 (-) |
| G127902 | LOC103367763,LOC102293787,LOC101466508 | non-coding | downstream | 341005 | 29450747 ~ 29451605 (-) |
| LOC120569974 | NA | non-coding | downstream | 356797 | 29435022 ~ 29435813 (-) |
| G127900 | NA | non-coding | downstream | 358960 | 29432837 ~ 29433650 (-) |
| G128028 | NA | non-coding | upstream | 1789 | 29797099 ~ 29797521 (-) |
| G128031 | NA | non-coding | upstream | 12936 | 29808246 ~ 29820796 (-) |
| G128030 | NA | non-coding | upstream | 17179 | 29812489 ~ 29814765 (-) |
| G128032 | NA | non-coding | upstream | 61759 | 29857069 ~ 29857326 (-) |
| G128103 | NA | non-coding | upstream | 254182 | 30049492 ~ 30050853 (-) |
| G128026 | LOC103372056,LOC102784025 | other | downstream | 9405 | 29781954 ~ 29783205 (-) |
| G128025 | plcl1 | other | downstream | 15177 | 29777040 ~ 29777433 (-) |
| G127923 | LOC103391627,LOC101464856 | other | downstream | 399467 | 29387976 ~ 29393143 (-) |
| G127924 | LOC103391627,LOC101464856 | other | downstream | 404038 | 29388070 ~ 29388572 (-) |
| G127903 | LOC101464856 | other | downstream | 445721 | 29346079 ~ 29346889 (-) |
| kcnh3 | LOC102215587,LOC101479217,LOC102787819,LOC100702937,LOC102305604 | other | upstream | 305196 | 30100506 ~ 30279530 (-) |
| G128435 | NA | other | upstream | 1693712 | 31489022 ~ 31491705 (-) |
| LOC120569384 | rps24,LOC102780737 | other | upstream | 2087419 | 31882729 ~ 31936558 (-) |
| rubcnl | NA | other | upstream | 3084956 | 32880266 ~ 32929852 (-) |
| G128629 | lrch1 | other | upstream | 3146501 | 32941811 ~ 32942383 (-) |
