G128030


Basic Information

Item Value
gene id G128030
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 29812489 ~ 29814765 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU172221
ttaattaattatatttatttgtttttaaaacacacttcaataaatatttttcttcttttagtctttttttttctctcttctattTTACAAAAACGTACAGTGACTGTAAGAACAGGGAACAACACTGGATTAAAAGGTCAGCAGTGTAGACACAGGCCAACACAGACACTGCAGACGCCTAGAACCTAAAAATACCTTTACACATTTCCAAGTGTCTTACACAACTTTGTCCACATCACTATATGGCAGGTATAAACAACtctttcaattattttaaacgAATGTTAAGCACTATTTGACCACTGGTCTGCAAAGATAGGTAGCATCACACACCGAAGAGCACAGAGAGAGCTAGCTCTAGGTTAAGACACGGGTAAAACAGATACAAtgaTTTTCAGCAGATTTGAAACAAATTAAGGATAAAActcagaatgttaacacatctccaaccaagcagaaaaaaaaccaGTCTGCTGAATCCCAccgattttcattctggatgaaaactgtaaaaaaaataaaaaataattattgcaAATTAGTTACAATATAAACTACACATAGTAAAGCACTGCAGTGAATGAACGACTGCAGTCCCTTCTGCAGAGGTAAACATATCAGGTAAGTGCAGTGACATATGAAGCAGATGTGCGAGAGGCATGGAGAGGATAAGCAAACGCTTTGTACCTAAAACCTTATTTTTGAGTGTTTAAAGGCTCATACTGGTGTTTGTGCAAGTTTACTTCATTTACAACAATTTATGTATGCTCTGTCTTACTGctagtctggctcaacggatGTACATTGGGATGTCCCTCCCCGTTTCACTACCTCTGCTATCAATTTTGCAAGGGCCCCGTTTCTGCATCCAgtttggcaatgcaagactactttACTGCTGACCGTTTTCCAAAACTTTGCAACCTTCAGGGACTTGAAACTTGCTTGAGACGTGATCCATCACAGTGAACATTATGCTTGGTTTTATTTTTAGGAAAAGAGACATCATTGTGTGTTAAAGATGGATTCATTTGAAACAAATCTGCTGTTTCAGGTGGGAAATCAGGAGCTGCTGAAGCTCAGACAGAGTTGCATTGATGAGCTCTACTGTTAGAAATCTAGAAAAAAGTACCCTGTGAGACAGATATTGTCAGTTTGGCAGCATACTGCATCACCACAATGTgatattttaacaaaaataaacctGGGCGTGATGTTCGCTGACACGGATTGACTTCACTGACATCACCTGCAACCAATAGCTGCCTGGAAGGTATAAAAGCACATTCAATCTATATGATTCAAATACAATTGTAAAGGATTTGCAGTAAGTAGGTTAAATCATGCCAAAAAACACAGGTACGGTCCTTCAGTATCACCCAGCTACAAATTAGTGTCAGGCGTCATATCTTCCTGACACTAACTTATTATTATCGGTTATTACATGTTGCTTTTCATGCAACAGTAGCAGCTGCACAGTCTACCATAGATCTTCTTTGTAAATACCTAAGTACCTAATGGATTATTCTGAGAATGAGTTTTAACTTAACTTCTGAAAGTATTACTGAAacctgacccccccccccctagtTAACCTACAAAATGCAAACCCTGTGACCTCCATCTTTGCTGTATCCCCTCGCCTGTTCCCGCTCCCTGACCCAGTTGTATTCCCCGTGTCAGCACGCGTGTAAAGCGGAACGCAGAAAGCTAATACTGGGGTTTGTTTTACTGGAGCTGATGCATCATTAATGCAGAGAGATCCTCCCTGCAGGTATGCACATCTCTGACAGAGGTCCTATGCAAATTGTAGTTTTCATATACTTGAGCTCAGGGGGCAGTGGAGAGCCTGGGATATTGCTCCGGAAGCTGCTGTCCGATTCAGTGATCGTTAGGGGCCGGGACACAccgggccgataatcggccgtgggacagtctggcaagGTCAGTGAT

Function

NR:

description
PREDICTED: von Willebrand factor isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172221 True 1953 lncRNA 0.41 2 29812489 29814765

Neighbor

gene id symbol gene type direction distance location
rftn2 rftn2 coding downstream 134323 29643664 ~ 29678166 (-)
hspd1 hspd1 coding downstream 186418 29615962 ~ 29626071 (-)
sf3b1 sf3b1,LOC100380860 coding downstream 209752 29584942 ~ 29602737 (-)
ankrd44 ankrd44,LOC102781020 coding downstream 232275 29539342 ~ 29580214 (-)
si:dkey-57a22.11 NA coding downstream 319811 29483771 ~ 29492678 (-)
satb2 satb2,LOC103367524 coding upstream 85490 29900255 ~ 29964320 (-)
dnajb11 dnajb11 coding upstream 180262 29995027 ~ 30005938 (-)
lcmt2 lcmt2 coding upstream 213900 30028665 ~ 30045755 (-)
dbr1 LOC107551939,LOC101160048 coding upstream 244402 30059167 ~ 30070582 (-)
tnfsf11 LOC104934832 coding upstream 559436 30374201 ~ 30387537 (-)
G128028 NA non-coding downstream 14968 29797099 ~ 29797521 (-)
G128027 plcl1,LOC107374039 non-coding downstream 17179 29792610 ~ 29795310 (-)
G127995 NA non-coding downstream 197466 29612222 ~ 29615023 (-)
G128006 pikfyve,LOC107595854 non-coding downstream 281465 29530486 ~ 29531024 (-)
G127902 LOC103367763,LOC102293787,LOC101466508 non-coding downstream 360884 29450747 ~ 29451605 (-)
G128032 NA non-coding upstream 42304 29857069 ~ 29857326 (-)
G128103 NA non-coding upstream 234727 30049492 ~ 30050853 (-)
G128134 NA non-coding upstream 284932 30099697 ~ 30100361 (-)
G128139 NA non-coding upstream 454171 30268936 ~ 30302930 (-)
G128145 NA non-coding upstream 489349 30304114 ~ 30306353 (-)
G128026 LOC103372056,LOC102784025 other downstream 29284 29781954 ~ 29783205 (-)
G128025 plcl1 other downstream 35056 29777040 ~ 29777433 (-)
G127923 LOC103391627,LOC101464856 other downstream 419346 29387976 ~ 29393143 (-)
G127924 LOC103391627,LOC101464856 other downstream 423917 29388070 ~ 29388572 (-)
G127903 LOC101464856 other downstream 465600 29346079 ~ 29346889 (-)
kcnh3 LOC102215587,LOC101479217,LOC102787819,LOC100702937,LOC102305604 other upstream 285741 30100506 ~ 30279530 (-)
G128435 NA other upstream 1674257 31489022 ~ 31491705 (-)
LOC120569384 rps24,LOC102780737 other upstream 2067964 31882729 ~ 31936558 (-)
rubcnl NA other upstream 3065501 32880266 ~ 32929852 (-)
G128629 lrch1 other upstream 3127046 32941811 ~ 32942383 (-)

Expression


Co-expression Network