G128471


Basic Information

Item Value
gene id G128471
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 31807177 ~ 31812527 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU172858
ttttccacaaaaaaagtatgcagtcacaaaaaaagaagaagagggttTTCAAACTCGGCAACatgatacagtatatgcagCGATGAGACCAAACCTAACCAGACGCTTTGACAGACTGTCGTCACGACAGTGGAGATGggttcagtttttcttttttggcaaGCTTTGGAACGAAAAGAAATACAGGCGAGAGACAAGCCAAGAGTTGAGAAATGAGTCGTGAGCTGGAGGGTGAGGCTGGTCGTGGTTAACCCTCGTGtcgtcttcccgtcgaccatgaacTCGTCGTCCATCCAGGTCAAAAAGACAATTTGaattttttggtgcttttttcagcgtttctggctctttttttttgaatgcttttgacacttttttaaatgttttttgtcacttttttcaacgttttatttttaaattcatggttaataaacctaatttatatgacattataccacATTTCTGAGTCAAaaggcagaaattatgaattattttgactattagttaaggcgctgacacaccaacccgattctCGGCCGTCGGaaagtctggcgaggtcggtgactcgagtctgttcgttgtgttccgtgccgtcgccGGTCGTTCATTTTGGCTCGTTgaagtgggcagtcggactcaatggccaatctgattggtggagtgctagcccttgactagcgaatcagtgcacttatgttaaaacacttaacgGAAATGATGAGCGGGGTCGAACGCCTGACGAAAATCtctcaaactgacctttgtcgatctgaaatgaagaccgaatCAGCAACTGTACGGCCTATTTCTCATTTAaaacgtttcggtgaactattttcgtaaaatacgagatcgtattccgaacgagccgccattatggtcggtttTAAAATTCGGAAGAAAGCCAGACCCATTTccggtttaaatttttttgggcgacaatacagattagcgccgcctgctgttatggagaacgtacgctcaagtcggcgtcgctccggtgtgttccgaggcacgtttttggacctcggggagccgactgatcagtccgactggcttttctgccgacgggtTGTTGTGTCAGAGCCTCTTAGATCAGAGGAGTAAATCACAGACTGGCTcgtgtcaaagtttagtcacaaactggttttaaaaccatttaaacattatgaaattgaataaaacaccccaaattcaatgaaagtaaccATTCATTTTACGTGCAAAGATTGTTgaatgggttccatacaacgtacatccatgcatccGTGTTATTTTGGGTcattttggttgaaagaaacacatatttctgatataaaaaaaaacgttgaaaacgggacaacacaagggttaatccattatttgaaaatgtaataatcAATAGATTGATCCCAACTCACAGCATACTCACTCACTTGTTCTGGTCGGCCACAAGGCCTTTCTTTTAGGGCTAGGGGTGGGAAGGAAAATCAAAAGTCCGATGTATCGTGACTTTTGATTTAAAATCGATTCTTTTCCCCagaattgatattttttattttatttgtttaccaGTGATTGACCTAAATGTTTCctgtttatacggtaccgcCGACGGCGACTACATCTTATCTGTTTCCAGGGAAAACGAGCGAAAGCAGAAAAAGCAGAAGATCCAtcttatgttcttctttacagaTGAAATGAAAGTCAGACTGACAATGTTCATTCTTCTTACAATTCGTGATGTATTGTCTCTAGAagggtattattcaacttttgttgttgttaaaaaaaggaaaagaaaatcccaaAACTCAATTTGATCAAAtcacaatacttctagaatcacaATACATAAAAATTCCAACTTTTATGTTGAAAATGTATGTTGATGCAAGCCAAATCGCTTCTGAAAGGCTACCGGAGTGGTATGGCGCACGGCAGGAGGACGGACTAAAATCACGAACGGGAGGAACGTGGCGCATCTGCGCCTGGTGGAATCCCCCGGCAACGGTACACGTATGTGTCAACATGTGTGATGACTCACAAAAGGAGATAACGGCGCTCACGGTACCGAGACCAAAACTCACTGAAAACGGTATTACATTCggtttatcgcaccgttgtgacgaagagagagctgagccagaaggcaaagctctcgatctaccggtcagtatccaatcctaccctcacctatggtcatgaaggctggtgGTCAGGACCGAAAGAACCAGATCCAGGGTACGAGAGgacgaaatgggtttcctcgggggggggggagggggggctggcgtctcccttagagatagggtgagaagctcagtcatccacGAGGAACTCGGATGGGGAGGTGTTCCCGGaacatccagctgggaggaggcctcggggaagacccaggactaggtggagggacatccagccgggaggaggcctcggggaagacccaggactaggtggaggaaCCTccacccaggactaggtggagggacctCCAGTTGGGAGGatgcctcggggaagacccaggactaggtggagggacgtccagcagggaggaggtggaggggaaaacccaggactaggtggagggacctCCAGTTGGGAGGCGGTCtcgggggaagacccaggactaggtggagggacctccagctgggaggaggcctcggggaagaccgaggactaggtggagggacgtccagatgggaggaggtggagggggaagacccaggactaggtggaggcaccTCCAtctgggaggaggtctcggggaagaccGAGGACTAGttggagggacgtccagctgggaggaggtctcgggggaagacccaggactaggtggagggacctCAATCTGCTCAGCTGATTGAGCATCTCATCCATCCATTCGACTTAAGCTGACAACAACAGAGAGAGCAGCATCCGATGAAGACCCTGACATACGGTCAAAAGCACCAGAACAAGTGTGAGTGAGCGGACTTTGAGTCGAGGTTGTTTTCGTCCACGGATGTTTACGCACATGATGCAATAATAGTTCGGtcagaaaaacagtgaaaaatgtccacCTTCATTTTCAAATGACTTGTTGTTGTCCGGCCGACAGTTCAAACATTCAattaacaagaaaataaaagcagcaaaaaaaaaaacagacagtgtTTGAAATTCAATCAATTTAGACCACGTCACCTGCTGTGACTCATTTCCTGTAAAATGATGACTCAATTACGTGACTAAACGTTTTGGCACCGGTGGAGAGCTTGATTCAAAGTCGGGGTACAAGATTAATAAATTATTCTGCCgggtgttaaagaaaaaaaaaagtccagactgAATATCTGGACGCGTGAGATGAGCAGGACGCACAGGGAGACAGAACCTGAACATGTGACTCGTCACGTTGACGAACAAATAAATAGAGGAGATTCGAGTGACAAAAGGCTACGACATCTAAAAGTGTCTTTTCTTGGCGATCAATccacagtttttttgtttgttttttttatccaaagGGTTCaaagtgttgctttaaaaaacGCTGTGCCATAACAAGAGTACAAAAATACATAACTATGCAAGACGGGGAACTATTAAAAGAGTCTTTGTGAATACTGTCGGGAGAGAATACGTCGGGAGACGTGGCGGCGGTCCGGAGAGATGTCCGCGGGAACAAAGCGTCGGAAGATAGCAGCTGTGGCGTTCGGGGTGAGCAGTTAGGATTGGGCATCGTggaactgtttaaaaaaaatagttttttgttCTTCTATTGGAGTCGTTAACAATCTaatcatcggttccaaatttaaaggtgcagtaggtgagacttataaagctaactttctgtcatatttgctgaaactgaccctatgttccagtagaactacatgaagcaggtcattaaaataaaaaatttaaaatccggctcctctggctccacctacagcctgtagtgtgatttgcaaaaatccaccgctccctgttcagatgcaccaatcagggccagcagggtgtctaactgcgtatcaatcactgctcaggcacacgctttcattctcccttgtggggggaggggcttaggagaccattttgggctttagcggaaaggggggagggactgagaagtcgTCGATGTCCTGGATCTTCTCAATCCTACCTTAGGCACCTTTAACACAGGTAACTACGTTTtggttgtgttgcagccacggAGCACAGCAAGCAGcgctctaaagtgtggctttatGTTAGGTTGAAAAAGCGGTAAAACTGTAACTCACGATTGAccattcaatactttttaaggCGCTGACCGAActgcctctaaagtattgagtGTCAAAAAAATGCCTCCCGTCAATACCAAAATTTCAATCCCTAAGgggtaaatctcatcagcgtcagagagccaatcagcacgcagcatgcttctaccgagatctaataatgtctgtgattggctgtctaacgttacacgtcgtagtgACACGCAGGAAGAACTCGACGATGCACAGAGAGACGGGACTCTCCGCGTAGTCGGAGCTGgaacagaaataaaaagatCTGTGCCGTAATGTGCAACGTTGTCATTTCTTTTGGTTCTATAAAATTGGTTCAGAATCGTTAAGGAACCGATATGGAAGTCCCGGTATTGGTGTCGAAAACTTTggaacgatgcccagccctggtgaaataagcacgtgacccgtttcaactccacccctcaaagaatcgacAATCGATAAGAAACCGgcatcgaaaggaagaatcggaattggaacaagaaatgctaataacgaaacgatgcccaaccctagtaagCAGACAGCCGACGTGCAGCATTTCAAACTGTGAAACTGTTTCGAATGCTCCGGCGGAGCCAGGTGGTGCGCAGGCTGTGCGAGTAGTGCTGGCGAGCAGTGAGTTCAGATGGCGTAGTCGTCCTGAGCGGCGGGGCTGAAGGCGGAGCTCCGCAGGGCGTCCAGGCAGTTGACCAGGATGAGCGTGCCCGTCAGGTGCTTCCAGCGTTTGGTGATGGGGCTCTTCATCTTGTCCAGGCCCATGTGCAGCTCCTGGATCACGTCTCGGTAGCTGTCGCCGATCTGAGCCGCCCACGTGACCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172858 True 5097 lncRNA 0.47 3 31807177 31812527

Neighbor

gene id symbol gene type direction distance location
frzb frzb,LOC102778849 coding downstream 180907 31602893 ~ 31626270 (-)
nup35 NA coding downstream 249239 31549596 ~ 31557938 (-)
ddx3xa ddx3x,LOC104933609,LOC101467955,LOC102776245 coding downstream 263955 31523485 ~ 31543222 (-)
nyx nyx,LOC102775957 coding downstream 290844 31504191 ~ 31516333 (-)
LOC120569690 NA coding downstream 401800 31399019 ~ 31405377 (-)
LOC120570281 NA coding upstream 189929 32002456 ~ 32003492 (-)
LOC120570286 NA coding upstream 195607 32008134 ~ 32009542 (-)
LOC120569388 NA coding upstream 285507 32098034 ~ 32099446 (-)
LOC120570290 NA coding upstream 302721 32115248 ~ 32116580 (-)
LOC120570291 NA coding upstream 318721 32131248 ~ 32132592 (-)
G128466 NA non-coding downstream 29634 31776852 ~ 31777543 (-)
G128464 NA non-coding downstream 75189 31731458 ~ 31731988 (-)
G128445 NA non-coding downstream 256047 31550470 ~ 31551130 (-)
G128426 NA non-coding downstream 323319 31479819 ~ 31483858 (-)
G128410 NA non-coding downstream 456491 31349286 ~ 31350686 (-)
G128473 NA non-coding upstream 15921 31828448 ~ 31828999 (-)
G128482 NA non-coding upstream 238774 32051301 ~ 32051650 (-)
G128486 NA non-coding upstream 253749 32066276 ~ 32066527 (-)
G128492 NA non-coding upstream 264029 32076556 ~ 32077057 (-)
G128507 NA non-coding upstream 367169 32179696 ~ 32180016 (-)
G128435 NA other downstream 315472 31489022 ~ 31491705 (-)
kcnh3 LOC102215587,LOC101479217,LOC102787819,LOC100702937,LOC102305604 other downstream 1527647 30100506 ~ 30279530 (-)
G128026 LOC103372056,LOC102784025 other downstream 2023972 29781954 ~ 29783205 (-)
G128025 plcl1 other downstream 2029744 29777040 ~ 29777433 (-)
G127924 LOC103391627,LOC101464856 other downstream 2418605 29388070 ~ 29388572 (-)
LOC120569384 rps24,LOC102780737 other upstream 70202 31882729 ~ 31936558 (-)
rubcnl NA other upstream 1067739 32880266 ~ 32929852 (-)
G128629 lrch1 other upstream 1129284 32941811 ~ 32942383 (-)
G128731 NA other upstream 1401580 33214107 ~ 33252272 (-)
G128764 cnot11 other upstream 1694516 33507043 ~ 33509076 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1811049 NA non-coding NC_048586.1 CM023240.2 41668949 ~ 41670878 (+)