G22792


Basic Information

Item Value
gene id G22792
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 39866181 ~ 39867247 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30965
aaaatatttttcacattttgctCATGTTTTTGCATgcgtttgtttttatattttgagacTGTTTGacgttgtaaaaaaaaacaaaaaaaacgtctAAATGCTGATTTGAATGGAATTGTGACAAAATGTGTCTGATCTACTGTATTTCAAGCAGTTTGTGTTTTACAGTGTATCCCATGAAACATAATATTTATCAATGGCCAATTGTTATTGTTAAATCCCCCCTAATATTTAGTTGTTGAAACACTGGATGATTTTAAGACCTTATAATTGCCGCATGGCACTTAAGCAAATAAGAAAAGTGAAACTGTTAGAGTGTGTAGTATGGACTTTTAAGACAGCTGGTCTGCAATGTACAGTGTTCTATAGTAGTAGTTCCAGGTCCACAACAGGAACTATTTTCAGTCACAGGTATGCTTCATTTCTAAGTGTAGACTCCTGCAGCTTAGTAGAGCTAGCTGGGACTCCAGATCCCTCGCACAGCGCGCCGTTGTGTTGTCTGTGCtgttacatctttttttttaaaacctcgaAACATCTTCTAACAAGTTTGGCAGGTTTCACTTAAAGGGAATGAAATGTTTTACCCTCAACCATCCTCACCGCTGTCAGAACTGTTCTCCTCTCCCTGACTCATTagtttaaaaatgcatttatttatttttcaatgctTGTTACTTAGTGCAGACATAAATCATATATCATTTCATCTCCCTTTTTAATTTTGCTTGTAACCTCGCTTTACAAACCGTATAACTTGTTTGTTATTGGGATTTTAATATAGAATACACTTATGTGCCATGTTTGCATTAGAACATTGTTAATGTGCACACAAGCTTTCCATGtatcagtgtttgttttttttccagatcCAGGCACAGGATTGCCATAAAATCTGATTACCTCATACTACTGTATATCCTATGCTAGACACTAACTTCACAGTCACTACTTTACAAATGTCATGCTTATttgcagttttattttgaaattgaaaACAATTCTATGCAACCTGTAATATCATACCTTCATGAAATGTTTACCCCaagtatgattttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30965 True 1067 lncRNA 0.34 1 39866181 39867247

Neighbor

gene id symbol gene type direction distance location
frem2b LOC103363427,LOC102301626,LOC101479746 coding upstream 761 39796797 ~ 39865420 (+)
LOC120551823 NA coding upstream 144232 39716242 ~ 39721949 (+)
LOC120546549 NA coding upstream 188508 39674481 ~ 39677673 (+)
nbeab LOC103353590 coding upstream 217653 39493382 ~ 39648528 (+)
LOC120551813 NA coding upstream 374261 39371883 ~ 39491920 (+)
urb1 urb1 coding downstream 191532 40058779 ~ 40084296 (+)
LOC120544406 NA coding downstream 219038 40086285 ~ 40127430 (+)
LOC120551839 tiam1,LOC103360909 coding downstream 276603 40143850 ~ 40161183 (+)
LOC120544458 cldn8 coding downstream 323290 40190537 ~ 40191690 (+)
LOC120544445 LOC103378146,LOC104923282,LOC104963590 coding downstream 325953 40193200 ~ 40194923 (+)
G22724 NA non-coding upstream 212566 39648809 ~ 39653615 (+)
LOC120553286 NA non-coding upstream 922450 38942254 ~ 38943731 (+)
G22582 NA non-coding upstream 952229 38913133 ~ 38913952 (+)
G22567 LOC108267897 non-coding upstream 1011463 38854485 ~ 38854718 (+)
G22566 NA non-coding upstream 1049180 38816598 ~ 38817001 (+)
G22829 NA non-coding downstream 82034 39949281 ~ 39949480 (+)
G22830 LOC103363423,LOC104943853 non-coding downstream 91101 39958348 ~ 39959071 (+)
G22831 LOC102201911,LOC101478053,LOC102303851,LOC107095568 non-coding downstream 97435 39964682 ~ 39964908 (+)
G22832 LOC104946755,LOC101062627,LOC107095568 non-coding downstream 157445 40024692 ~ 40025041 (+)
G22837 NA non-coding downstream 210140 40077387 ~ 40077717 (+)
G22731 NA other upstream 180155 39682645 ~ 39686026 (+)
brca2 NA other upstream 626733 39222726 ~ 39239448 (+)
robo1 robo1 other upstream 1561391 37934936 ~ 38304790 (+)
G22263 LOC103133141 other upstream 2422353 37440872 ~ 37443828 (+)
dynll2a dynll2a,LOC107554284 other upstream 2596882 37263810 ~ 37269299 (+)
G22827 LOC103363423 other downstream 76328 39943575 ~ 39945875 (+)
tiam1b tiam1,LOC103360909 other downstream 294035 40161282 ~ 40186136 (+)
LOC120544392 grik1,LOC100705871,LOC102307112,LOC103360904 other downstream 336048 40203295 ~ 40247024 (+)
mtus2b mtus2 other downstream 909426 40776673 ~ 40820646 (+)
fndc3a fndc3a other downstream 1285200 41152447 ~ 41222488 (+)

Expression


Co-expression Network