G22567 (LOC108267897)


Basic Information

Item Value
gene id G22567
gene name LOC108267897
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 38854485 ~ 38854718 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU30675
aaggagccagttgaggtggttcgggcatctggtaaggatgccccctgggcgcctccctagggaggtgttccaggcacgtccagctgggaggaggcctcggggaagacccaggactaggtggagggattatatctccaacctggcctgggaatgcctcgggatcccccagtcggagctggttaatgtggctcgggaaagggaagtttggggtcccctgctggagctgctcccccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC108267897 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30675 True 234 lncRNA 0.47 1 38854485 38854718

Neighbor

gene id symbol gene type direction distance location
LOC120548255 LOC104947571 coding upstream 26802 38826715 ~ 38827683 (+)
LOC120548469 LOC102195737,LOC102793578,LOC101475763,LOC106675049 coding upstream 41933 38803639 ~ 38812552 (+)
LOC120551784 LOC104946035 coding upstream 55867 38797677 ~ 38798618 (+)
or71aq2 LOC104946036 coding upstream 60191 38793359 ~ 38794294 (+)
chrna10a chrna10,LOC102305724,LOC102783135,LOC102213612,LOC100689876 coding upstream 74879 38771274 ~ 38779606 (+)
LOC120552206 NA coding downstream 6195 38860913 ~ 38861878 (+)
LOC120553818 NA coding downstream 10299 38865017 ~ 38868919 (+)
LOC120552043 NA coding downstream 46582 38901300 ~ 38902265 (+)
LOC120548975 LOC104923302,LOC103353600,LOC106675465 coding downstream 61385 38916103 ~ 38917224 (+)
LOC120548843 NA coding downstream 71474 38926192 ~ 38927204 (+)
G22566 NA non-coding upstream 37484 38816598 ~ 38817001 (+)
G22559 NA non-coding upstream 64783 38789422 ~ 38789702 (+)
G22558 NA non-coding upstream 68116 38786124 ~ 38786369 (+)
G22536 NA non-coding upstream 79143 38759100 ~ 38775342 (+)
G22546 LOC100691215,LOC103353587 non-coding upstream 104732 38743683 ~ 38749753 (+)
G22582 NA non-coding downstream 58415 38913133 ~ 38913952 (+)
LOC120553286 NA non-coding downstream 87536 38942254 ~ 38943731 (+)
G22724 NA non-coding downstream 794091 39648809 ~ 39653615 (+)
G22792 NA non-coding downstream 1011463 39866181 ~ 39867247 (+)
G22829 NA non-coding downstream 1094563 39949281 ~ 39949480 (+)
robo1 robo1 other upstream 549695 37934936 ~ 38304790 (+)
G22263 LOC103133141 other upstream 1410657 37440872 ~ 37443828 (+)
dynll2a dynll2a,LOC107554284 other upstream 1585186 37263810 ~ 37269299 (+)
G22106 wdr81 other upstream 2026074 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 2038847 36813848 ~ 36815638 (+)
brca2 NA other downstream 368008 39222726 ~ 39239448 (+)
G22731 NA other downstream 827927 39682645 ~ 39686026 (+)
G22827 LOC103363423 other downstream 1088857 39943575 ~ 39945875 (+)
tiam1b tiam1,LOC103360909 other downstream 1306564 40161282 ~ 40186136 (+)
LOC120544392 grik1,LOC100705871,LOC102307112,LOC103360904 other downstream 1348577 40203295 ~ 40247024 (+)

Expression


Co-expression Network