LOC120552043



Basic Information


Item Value
gene id LOC120552043
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 38901300 ~ 38902265 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039789691.1
ATGATTGTTACGAACAAAACAGCAGTCAAAGACTTCTTAATATTTGGATTCCCAGGACTTGACCCAATGTATTATGGACCTGTATCTACTCTTCTTTTCTTTACCTACATGGCTATTCTTGttggaaatatttttattttagtttttgttggaGTTGAGAAGCATCTTCATAAGCCAACATATCTGATCTTCTGTCATATGGCAATGAATGATTTGTTATTTGGGACAGTGACCTTACCAAAAATGATATCCAGATATTGGTGGGATGACAAGATAATATCTTTTGGTGCCTGCTTCACTCAGATGTTTTTTGTTCATTCCTTGGGAGCAATTCAATCTCTCCTTCTCCTTATTATGGCCCTTGATCGTTTTATTGCAGTTTGTTTTCCATTAAAATATCATGTTCTACTTACAAATAACATTGTATCTATGGCTTGCGGATTGTCATGGATTGGTACATTTCTTAGGATGATGGGGGTTATATATCATGCCCTAACCTTGCCTTATTGTAAATCTAATATTGTGCAATGTTATTGTGACCATACTTCAGTTACAAACCTGGCATGTGGTGGAGATGTAAAATATGTTCAGACTGTTGCTCTCATCCTTGCAATGTTTAGTCTCTTGCTTCCACTttcatttatacttttttcctttatttccaTCTTTGTAGTTGCTTTAAGAATAGGAAACGCAGAAGGACGATACAAAACCTTCTCAACTTGTACACCACAGTTACTCATTTCTTGCCTTTATTACGTGCCAAGATGTTTTGTTTATCTAGCTCATTATACAGGATTCTCTTTCAGTTTGGACATCCGCATTTTATTGGTATTGTTGTACAGTCTTCTTCCTTGTGCTGTTAATCCAATCATATATTGcttcaaaacaaaatatatcaaaGATATTTTGATGAAGAGATTGAAAAATGCTAAAGTTGGAATGAAGCTTCATAGTAATGCATAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039789691.1 True 966 mRNA 0.35 1 38901300 38902265

Neighbor


gene id symbol gene type direction distance location
LOC120553818 NA coding upstream 32381 38865017 ~ 38868919 (+)
LOC120552206 NA coding upstream 39422 38860913 ~ 38861878 (+)
LOC120548255 LOC104947571 coding upstream 73617 38826715 ~ 38827683 (+)
LOC120548469 LOC102195737,LOC102793578,LOC101475763,LOC106675049 coding upstream 88748 38803639 ~ 38812552 (+)
LOC120551784 LOC104946035 coding upstream 102682 38797677 ~ 38798618 (+)
LOC120548975 LOC104923302,LOC103353600,LOC106675465 coding downstream 13838 38916103 ~ 38917224 (+)
LOC120548843 NA coding downstream 23927 38926192 ~ 38927204 (+)
LOC120553280 NA coding downstream 44959 38947224 ~ 38948189 (+)
LOC120553269 NA coding downstream 58634 38960899 ~ 38962238 (+)
LOC120546593 NA coding downstream 77156 38979421 ~ 38980416 (+)
G22567 LOC108267897 non-coding upstream 46582 38854485 ~ 38854718 (+)
G22566 NA non-coding upstream 84299 38816598 ~ 38817001 (+)
G22559 NA non-coding upstream 111598 38789422 ~ 38789702 (+)
G22558 NA non-coding upstream 114931 38786124 ~ 38786369 (+)
G22536 NA non-coding upstream 125958 38759100 ~ 38775342 (+)
G22582 NA non-coding downstream 10868 38913133 ~ 38913952 (+)
LOC120553286 NA non-coding downstream 39989 38942254 ~ 38943731 (+)
G22724 NA non-coding downstream 746544 39648809 ~ 39653615 (+)
G22792 NA non-coding downstream 963916 39866181 ~ 39867247 (+)
G22829 NA non-coding downstream 1047016 39949281 ~ 39949480 (+)
robo1 robo1 other upstream 596510 37934936 ~ 38304790 (+)
G22263 LOC103133141 other upstream 1457472 37440872 ~ 37443828 (+)
dynll2a dynll2a,LOC107554284 other upstream 1632001 37263810 ~ 37269299 (+)
G22106 wdr81 other upstream 2072889 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 2085662 36813848 ~ 36815638 (+)
brca2 NA other downstream 320461 39222726 ~ 39239448 (+)
G22731 NA other downstream 780380 39682645 ~ 39686026 (+)
G22827 LOC103363423 other downstream 1041310 39943575 ~ 39945875 (+)
tiam1b tiam1,LOC103360909 other downstream 1259017 40161282 ~ 40186136 (+)
LOC120544392 grik1,LOC100705871,LOC102307112,LOC103360904 other downstream 1301030 40203295 ~ 40247024 (+)

Expression



Co-expression Network