LOC120551784 (LOC104946035)


Basic Information

Item Value
gene id LOC120551784
gene name LOC104946035
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 38797677 ~ 38798618 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039789365.1
ATGTATACAAATGCATCTACTAGGGAATTTCTAACACTGGCACCATTGGACTTATCTGCTACAGATATTTACCCAGCGTTTGTATTTGGCACACTTACCTAtttaattattgtattttgcaaCCTGTTGGTATTAACAACTATTGCTCTGAGTAAAAAGCTACACAAGCCCATGTTTATCCTGCTGTTTAACTTGCCCATTAGTGACATGGTGGGTGCTACAGCTTTTTTTCCTCAGCTTCTCTTTAGCATTGTGACACAGGAGAGGCTGATTTCGCATCCTGCATGTATTACTCAGGCTTTTCTGATTCATTTTTATGGTACAGGAAACATGCTGATCTTGACTGCCATGGCATATGACAGATATATTGCTATATGTTGTCCTTTGAGGTATAATGCTATCATGAGTCCACATAATTTAATCAGAATTATAATTTTAATATGGTTTATAAATTTCTCAATGATTTTTACGTTGTGTGTGATGGTTGCACGGTTTAAAGTTTGCAGGACGAATATAGTGGATTTGTGCTGTAACAATCCATCATTATTGAAACTGGTGTGTGAGGACACCAGAGTTAACAACTACTATGGAATAGCTACTATATTTATGATTATGGGTGGACCACTGCTAGTGATAATATACACATATGCACAGATCTTGCGCACATGTGTCATGACTAATCATACGGATGCCCGGAGAAAAGCCCTTCAAACATGTGGTAcacatttagttgtttttttaatcttgcaAATTAATACAACCTTTACACTCATTTCTCATCGCATTGAGAGTGCATCCCCGTACATTAGAAGGATTATTGGTGTGTCAGTTTTAATATTTCCCCCTTTTTTGGATCCAATTATATATGGACTGAAAACAACAGAACTGAAGCAGAACATGTTAATGTTTCTAAAAAGAAACTTTGGTTCGACCAAGTTGTAA

Function

NR:

description
PREDICTED: olfactory receptor 52B2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039789365.1 True 942 mRNA 0.36 1 38797677 38798618

Neighbor

gene id symbol gene type direction distance location
or71aq2 LOC104946036 coding upstream 3383 38793359 ~ 38794294 (+)
chrna10a chrna10,LOC102305724,LOC102783135,LOC102213612,LOC100689876 coding upstream 18071 38771274 ~ 38779606 (+)
apbb1 apbb1 coding upstream 888502 37895706 ~ 37909175 (+)
LOC120574139 ilk coding upstream 903900 37877229 ~ 37893777 (+)
si:ch211-149e23.4 NA coding upstream 928711 37856469 ~ 37868966 (+)
LOC120548469 LOC102195737,LOC102793578,LOC101475763,LOC106675049 coding downstream 5021 38803639 ~ 38812552 (+)
LOC120548255 LOC104947571 coding downstream 28097 38826715 ~ 38827683 (+)
LOC120552206 NA coding downstream 62295 38860913 ~ 38861878 (+)
LOC120553818 NA coding downstream 66399 38865017 ~ 38868919 (+)
LOC120552043 NA coding downstream 102682 38901300 ~ 38902265 (+)
G22559 NA non-coding upstream 7975 38789422 ~ 38789702 (+)
G22558 NA non-coding upstream 11308 38786124 ~ 38786369 (+)
G22536 NA non-coding upstream 22335 38759100 ~ 38775342 (+)
G22546 LOC100691215,LOC103353587 non-coding upstream 47924 38743683 ~ 38749753 (+)
LOC120573138 NA non-coding upstream 867240 37912602 ~ 37930437 (+)
G22566 NA non-coding downstream 17980 38816598 ~ 38817001 (+)
G22567 LOC108267897 non-coding downstream 55867 38854485 ~ 38854718 (+)
G22582 NA non-coding downstream 114515 38913133 ~ 38913952 (+)
LOC120553286 NA non-coding downstream 143636 38942254 ~ 38943731 (+)
G22724 NA non-coding downstream 850191 39648809 ~ 39653615 (+)
robo1 robo1 other upstream 492887 37934936 ~ 38304790 (+)
G22263 LOC103133141 other upstream 1353849 37440872 ~ 37443828 (+)
dynll2a dynll2a,LOC107554284 other upstream 1528378 37263810 ~ 37269299 (+)
G22106 wdr81 other upstream 1969266 36827910 ~ 36828411 (+)
G22099 wdr81 other upstream 1982039 36813848 ~ 36815638 (+)
brca2 NA other downstream 424108 39222726 ~ 39239448 (+)
G22731 NA other downstream 884027 39682645 ~ 39686026 (+)
G22827 LOC103363423 other downstream 1144957 39943575 ~ 39945875 (+)
tiam1b tiam1,LOC103360909 other downstream 1362664 40161282 ~ 40186136 (+)
LOC120544392 grik1,LOC100705871,LOC102307112,LOC103360904 other downstream 1404677 40203295 ~ 40247024 (+)

Expression


Co-expression Network