LOC120571107 (LOC100707240,LOC102312923,LOC102203509,LOC101472130)


Basic Information

Item Value
gene id LOC120571107
gene name LOC100707240,LOC102312923,LOC102203509,LOC101472130
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 32710841 ~ 32731554 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039819790.1
GAGTGCCGTCAAACACCCAACGTCCCACCGTCCCAGGATGCTCCTGGCAGGGCGTCCCGGTGCCGGTCAAACCTCCCATCTGGCCCCCGCCATCCTGCACGCTCTGGAGCGCTTCCCCGTCCACAGTCTGGACTCGGCCGTGCTGTTCGGAGTCAGCAGCACCTCGCCGGAGGAAGCCTGCGCCCAGGTGTTCTGCGAGGCCAAGCGGACATCTCCCAGCATCCTCTACATGCCCCACATCCAGCAGTGGTGGGACACAGCCGCGTCCTCGCTGAGGGCGTCCTTCCTCAGCCTGCTGGGCAGcatcccctccctctcccccatcCTCCTCCTCGCCACCTGCAGCGTCCCCCGACAACAGCTGGACCCAGAGATTCAGCTTCTCTTCCGGGAGGAGTACGGCGAGGTCTACACCGTCAGCGTTCCCATGCGGCTGGAGAGGACCGACTTCTTCCGGGACCTCATCCTGAACCAGGCGGCAGAGCCTCCACCCTCCACCAAAAGAGCACTGACTCAGGCCATGGAGATCCTTCCCCTGGCTCCCCTGCCCCCCCCACGCCAGCTGCCCGAGCAGGACCGCCTCCATctggagcagcaggaggaggacgTCCTGCGGGAGCTCCGCCTCTTCCTGCGCAACGTCACCGAGCGTCTGAGTCTGGACCGCCGCTTCAAGGCCTTCACCAAACCGGTCGACATCGAGGAGGTCCCGGACTACATGTTGGTGATCAGGAAGCCCATGGACTTCTCCACGCTGCTGACCAACATCGACGAGCAGAAGTACGTCACCGTCGGCGAGTTCATGTCGGACGCCGAGCTCATCTGGCAGAACGCCCTCGAGTACAACCCGGACAGCGACCCCATGGacCGTCACATCCGTCACCGTGCGTGCGCCCTGAAGGACACGGTGCGCGCCATCATCCGAGACGAGCTGGACGAAGACTTTGAGAGAGTCTGCGAGGAGGTCAAGGAGTCGCGCATCAAGAGAGCGTCTCTCTGCAGGCTGGAGGGCAGCTCGAAGGAGGCCGATGGCGTCTGCAGCTCGGCCAGAAACAGCCCTGGACCTCGGAAGAGAAAACGCCCCAAACAGCCGAGAAAATCCAAGTGGAGCACCGGCGTCATCAAGAAaaccaagaagaagaagaagaagccgcCCACCCCCGCCTCACCTCCCTCTCCGCCCACGTCTGACTCGGGCCCGGAGGAAACGAGAACACCGAACGGCGCCTCAGCTCGCCCGAGCTCGTCCGCCTCGCCGTCCGAGAGCTGCGACGACGACCACGGGGAGCACCCGAACGCCGCCGCCGCGAACGGGTTCCACCGCGACTTCAACGGCGTCTCGGAAATCCAGAACGTCGGAGTCCTCGCGAACGGGTGCCGCCGAACTCCCCCGAACCCGAACGCCGTGGCGAACGGGGTTTGTTTTAGAACAACAGCGGAGCGGAGCAGCTGTGAGACCAGAGCCAACATGGCCGCCCAGGAGCAGATGCAGCTGTTCAGCAGAGCCGGCTGCGTGGACATACTGGACGGGGAAACGCCGCCGCTGGTCGTCGACCACGGCAAACTGAGGGATCTCCTCAGCAGAGCCGTGGCGAGGACCGAGCGAGCCGAGGTGGAGGTTCTGGAGAAGCTGTACGCCGTGCTGGCCCAGTGCATCTACCGCCACCGCCACGCCTACGACAAGACGGCGCTCGCCAAGgaaATGAAGAAAGAAATCGACAGCTCCTCCTGATCTTGCCCATCAGGTCTATTTTAATAAAACCTCAGAGCATTCAAACAGGACGTTGTTAACTCCTCATTTTGATagtgacacacaaatttacctcagtatctatctatttatctatttatttagcCCGTTTGATCTTATTTATAATAGAGTATATAATAACGTGACCCATTCATGTAAAAAAGATCCCGAGGACCATGTTATTTCATCTTAATTCATCGTGAAATAAACTAGAATAAAAG

Function

NR:

description
PREDICTED: ATPase family AAA domain-containing protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039819790.1 True 1971 mRNA 0.60 11 32710841 32731554

Neighbor

gene id symbol gene type direction distance location
LOC120571112 NA coding upstream 123399 32573800 ~ 32587442 (+)
LOC120571114 NA coding upstream 175164 32454197 ~ 32535677 (+)
LOC120571110 NA coding upstream 180959 32516456 ~ 32529882 (+)
LOC120571111 NA coding upstream 198215 32483050 ~ 32512626 (+)
LOC120571113 NA coding upstream 259322 32430414 ~ 32451519 (+)
LOC120570938 NA coding downstream 13035 32744589 ~ 32761985 (+)
LOC120572046 NA coding downstream 425267 33156821 ~ 33160537 (+)
LOC120572051 NA coding downstream 459827 33191381 ~ 33195543 (+)
LOC120570944 NA coding downstream 950053 33681607 ~ 33688186 (+)
LOC120572064 NA coding downstream 975523 33707077 ~ 33707676 (+)
G138111 NA non-coding upstream 2892 32706842 ~ 32707949 (+)
G138083 NA non-coding upstream 156276 32552011 ~ 32554565 (+)
G138068 NA non-coding upstream 303818 32406664 ~ 32407023 (+)
G137981 NA non-coding upstream 426948 32282111 ~ 32283893 (+)
G137983 NA non-coding upstream 428863 32281455 ~ 32281978 (+)
G138117 NA non-coding downstream 1256 32732810 ~ 32740022 (+)
G138118 NA non-coding downstream 6691 32738245 ~ 32857673 (+)
LOC120571116 NA non-coding downstream 60273 32791827 ~ 32853611 (+)
G138124 NA non-coding downstream 86589 32818143 ~ 32835293 (+)
G138135 NA non-coding downstream 103316 32834870 ~ 32987740 (+)
G138105 NA other upstream 11532 32641641 ~ 32699309 (+)
LOC120571115 NA other upstream 144679 32538277 ~ 32566162 (+)
G138076 NA other upstream 205865 32430410 ~ 32504976 (+)
LOC120571558 NA other upstream 707161 31995001 ~ 32003680 (+)
LOC120570800 NA other upstream 1027389 31617595 ~ 31683452 (+)
G138130 NA other downstream 252208 32983762 ~ 33020409 (+)
LOC120572048 NA other downstream 430822 33162376 ~ 33200180 (+)
G138177 NA other downstream 430862 33162416 ~ 33195323 (+)
LOC120570940 NA other downstream 787211 33518765 ~ 33519270 (+)
LOC120572068 NA other downstream 799251 33530805 ~ 33531621 (+)

Expression


Co-expression Network