LOC120570940


Basic Information

Item Value
gene id LOC120570940
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 33518765 ~ 33519270 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_628
atgactctgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggtcaggtcacagtgactcagcctggagcagtgagctctgctcgGGGAGACTCTGTCTCCATCAGCTGCAGGCTCAGCCGAGAAGTTTTTGTAGGGACTGCGTATTGGAACAGAGGGAAAAGGTTATTGTActggtaccaacagagagatggagaagctCCTAAACTGCTCATTTACTGGGTTAATGGACGAGCATCAGGGATTCCAGGTCGTTTTTCAGCCAGTGGATCAGGgactgacttcactctgaccatcagtggagttgaggctgaagatgcagcagtttattACTGTCAGAGTCTTCACTCTATCAACAGTCAGTGGttgttcacacagtga

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko04670 Leukocyte transendothelial migration
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_628 True 399 V_gene_segment 0.50 2 33518765 33519270

Neighbor

gene id symbol gene type direction distance location
LOC120572051 NA coding upstream 323222 33191381 ~ 33195543 (+)
LOC120572046 NA coding upstream 358228 33156821 ~ 33160537 (+)
LOC120570938 NA coding upstream 756780 32744589 ~ 32761985 (+)
LOC120571107 LOC100707240,LOC102312923,LOC102203509,LOC101472130 coding upstream 787211 32710841 ~ 32731554 (+)
LOC120571112 NA coding upstream 931323 32573800 ~ 32587442 (+)
LOC120570944 NA coding downstream 162337 33681607 ~ 33688186 (+)
LOC120572064 NA coding downstream 187807 33707077 ~ 33707676 (+)
LOC120572074 NA coding downstream 191589 33710859 ~ 33712367 (+)
LOC120570946 NA coding downstream 196224 33715494 ~ 33716008 (+)
LOC120572062 NA coding downstream 203129 33722399 ~ 33722906 (+)
G138303 NA non-coding upstream 100794 33408746 ~ 33417971 (+)
LOC120572087 NA non-coding upstream 349189 33168222 ~ 33169576 (+)
G138174 NA non-coding upstream 374151 33143394 ~ 33144614 (+)
G138167 NA non-coding upstream 430317 33087859 ~ 33088448 (+)
G138133 NA non-coding upstream 451949 33011581 ~ 33066816 (+)
G138324 NA non-coding downstream 12984 33532254 ~ 33562356 (+)
G138323 NA non-coding downstream 81237 33600507 ~ 33746312 (+)
LOC120572060 NA non-coding downstream 221949 33741219 ~ 33741724 (+)
LOC120572056 NA non-coding downstream 224896 33744166 ~ 33744877 (+)
G138359 NA non-coding downstream 341502 33860772 ~ 33863936 (+)
LOC120572048 NA other upstream 318585 33162376 ~ 33200180 (+)
G138177 NA other upstream 323442 33162416 ~ 33195323 (+)
G138130 NA other upstream 498356 32983762 ~ 33020409 (+)
G138105 NA other upstream 819456 32641641 ~ 32699309 (+)
LOC120571115 NA other upstream 952603 32538277 ~ 32566162 (+)
LOC120572068 NA other downstream 11535 33530805 ~ 33531621 (+)
LOC120572063 NA other downstream 15387 33534657 ~ 33535271 (+)
G138322 NA other downstream 19845 33539115 ~ 33998689 (+)
LOC120572072 NA other downstream 24198 33543468 ~ 33544242 (+)
LOC120572061 NA other downstream 28789 33548059 ~ 33548579 (+)

Expression


Co-expression Network