LOC120572087


Basic Information

Item Value
gene id LOC120572087
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 33168222 ~ 33169576 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641349.1
acAACGCAGCAAGGCGGAAAGCAGCAGACAGTAGGGTTGCAGAAACTACCTACGCAGCAGCAATCAGGCTCACTGGACTTActTTTCAGATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAGATGTGATAACGATACCAGaagactgagaagaaACTGACCCTCATTAGAAAGATGATGGAGACCACATTTCCCCT
>XR_005641350.1
acAACGCAGCAAGGCGGAAAGCAGCAGACAGTAGGGTTGCAGAAACTACCTACGCAGCAGCAATCAGGCTCACTGGACTTActTTTCAGATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAGATGTGATAACGATACCAGactgagaagaaACTGACCCTCATTAGAAAGATGATGGAGACCACATTTCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641349.1 True 225 lncRNA 0.45 3 33168222 33169576
XR_005641350.1 False 222 lncRNA 0.45 3 33168222 33169576

Neighbor

gene id symbol gene type direction distance location
LOC120572046 NA coding upstream 7685 33156821 ~ 33160537 (+)
LOC120570938 NA coding upstream 406237 32744589 ~ 32761985 (+)
LOC120571107 LOC100707240,LOC102312923,LOC102203509,LOC101472130 coding upstream 436668 32710841 ~ 32731554 (+)
LOC120571112 NA coding upstream 580780 32573800 ~ 32587442 (+)
LOC120571110 NA coding upstream 638340 32516456 ~ 32529882 (+)
LOC120572051 NA coding downstream 21805 33191381 ~ 33195543 (+)
LOC120570944 NA coding downstream 512031 33681607 ~ 33688186 (+)
LOC120572064 NA coding downstream 537501 33707077 ~ 33707676 (+)
LOC120572074 NA coding downstream 541283 33710859 ~ 33712367 (+)
LOC120570946 NA coding downstream 545918 33715494 ~ 33716008 (+)
G138174 NA non-coding upstream 23608 33143394 ~ 33144614 (+)
G138167 NA non-coding upstream 79774 33087859 ~ 33088448 (+)
G138133 NA non-coding upstream 101406 33011581 ~ 33066816 (+)
G138141 NA non-coding upstream 197298 32861736 ~ 32970924 (+)
G138303 NA non-coding downstream 239170 33408746 ~ 33417971 (+)
G138324 NA non-coding downstream 362678 33532254 ~ 33562356 (+)
G138323 NA non-coding downstream 430931 33600507 ~ 33746312 (+)
LOC120572060 NA non-coding downstream 571643 33741219 ~ 33741724 (+)
LOC120572056 NA non-coding downstream 574590 33744166 ~ 33744877 (+)
G138130 NA other upstream 147813 32983762 ~ 33020409 (+)
G138105 NA other upstream 468913 32641641 ~ 32699309 (+)
LOC120571115 NA other upstream 602060 32538277 ~ 32566162 (+)
G138076 NA other upstream 663246 32430410 ~ 32504976 (+)
LOC120571558 NA other upstream 1164542 31995001 ~ 32003680 (+)
LOC120570940 NA other downstream 349189 33518765 ~ 33519270 (+)
LOC120572068 NA other downstream 361229 33530805 ~ 33531621 (+)
LOC120572063 NA other downstream 365081 33534657 ~ 33535271 (+)
G138322 NA other downstream 369539 33539115 ~ 33998689 (+)
LOC120572072 NA other downstream 373892 33543468 ~ 33544242 (+)

Expression


Co-expression Network